RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 PARD3Q8TEW0 1356 aa15.16■□□□□ 0.02
MCF2L-202ENST00000375597 PTPRGP23470 1445 aa15.16■□□□□ 0.02
MCF2L-202ENST00000375597 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-202ENST00000375597 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
MCF2L-202ENST00000375597 PLEKHH2Q8IVE3 1493 aa15.15■□□□□ 0.02
MCF2L-202ENST00000375597 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
MCF2L-202ENST00000375597 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
MCF2L-202ENST00000375597 NUP160Q12769 1436 aa15.15■□□□□ 0.02
MCF2L-202ENST00000375597 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
MCF2L-202ENST00000375597 ZBTB7CA1YPR0 619 aa15.13■□□□□ 0.01
MCF2L-202ENST00000375597 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
MCF2L-202ENST00000375597 KDM5CP41229 1560 aa15.12■□□□□ 0.01
MCF2L-202ENST00000375597 APBB1O00213 710 aa15.12■□□□□ 0.01
MCF2L-202ENST00000375597 FBLN1P23142 703 aa15.12■□□□□ 0.01
MCF2L-202ENST00000375597 HSP90AA1P07900 732 aaKnown RBP15.12■□□□□ 0.01
MCF2L-202ENST00000375597 ITPRIPQ8IWB1 547 aa15.12■□□□□ 0.01
MCF2L-202ENST00000375597 RLBP1P12271 317 aa15.11■□□□□ 0.01
MCF2L-202ENST00000375597 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-202ENST00000375597 USP35Q9P2H5 1018 aa15.11■□□□□ 0.01
MCF2L-202ENST00000375597 PRAG1Q86YV5 1406 aa15.11■□□□□ 0.01
MCF2L-202ENST00000375597 TCP11L2Q8N4U5 519 aa15.1■□□□□ 0.01
MCF2L-202ENST00000375597 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
MCF2L-202ENST00000375597 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
MCF2L-202ENST00000375597 ATP10BO94823 1461 aa15.09■□□□□ 0.01
MCF2L-202ENST00000375597 BECN1Q14457 450 aa15.09■□□□□ 0.01
MCF2L-202ENST00000375597 MTHFSP49914 203 aa15.09■□□□□ 0.01
MCF2L-202ENST00000375597 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0
MCF2L-202ENST00000375597 PDZRN3Q9UPQ7 1066 aa15.08■□□□□ 0
MCF2L-202ENST00000375597 PCDHB15Q9Y5E8 787 aa15.08■□□□□ 0
MCF2L-202ENST00000375597 ARHGAP5Q13017 1502 aa15.08■□□□□ 0
MCF2L-202ENST00000375597 CARD14Q9BXL6 1004 aa15.08■□□□□ 0
MCF2L-202ENST00000375597 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
MCF2L-202ENST00000375597 SOX12O15370 315 aa15.07■□□□□ 0
MCF2L-202ENST00000375597 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
MCF2L-202ENST00000375597 CDCA8Q53HL2 280 aa15.07■□□□□ 0
MCF2L-202ENST00000375597 PLEKHG5O94827 1062 aa15.07■□□□□ 0
MCF2L-202ENST00000375597 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 E9PSI1 815 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 WWC1Q8IX03 1113 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 GGNBP2Q9H3C7 697 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 C1orf115Q9H7X2 142 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 ARID3AQ99856 593 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 CABP2Q9NPB3 220 aa15.06■□□□□ 0
MCF2L-202ENST00000375597 SLC24A1O60721 1099 aa15.05■□□□□ 0
MCF2L-202ENST00000375597 A2MP01023 1474 aa15.05■□□□□ 0
MCF2L-202ENST00000375597 SRPK2P78362 688 aaKnown RBP15.05■□□□□ -0
MCF2L-202ENST00000375597 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
MCF2L-202ENST00000375597 SHANK2Q9UPX8 1470 aa15.04■□□□□ -0
MCF2L-202ENST00000375597 CDC42BPAQ5VT25 1732 aa15.04■□□□□ -0
MCF2L-202ENST00000375597 PANK2Q9BZ23 570 aa15.04■□□□□ -0
MCF2L-202ENST00000375597 LNPKQ9C0E8 428 aa15.04■□□□□ -0
MCF2L-202ENST00000375597 FAM135AQ9P2D6 1515 aa15.03■□□□□ -0
MCF2L-202ENST00000375597 MAGI2Q86UL8 1455 aa15.03■□□□□ -0
MCF2L-202ENST00000375597 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
MCF2L-202ENST00000375597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.02■□□□□ -05e-6■■■■□ 20.3
MCF2L-202ENST00000375597 KDM5DQ9BY66 1539 aa15.02■□□□□ -0
MCF2L-202ENST00000375597 ARHGEF12Q9NZN5 1544 aa15.02■□□□□ -0
MCF2L-202ENST00000375597 THUMPD2Q9BTF0 503 aaKnown RBP15.01□□□□□ -0.01
MCF2L-202ENST00000375597 NCLP19338 710 aaKnown RBP15.01□□□□□ -0.01
MCF2L-202ENST00000375597 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
MCF2L-202ENST00000375597 FOXD4L5Q5VV16 416 aaPredicted RBP15□□□□□ -0.01
MCF2L-202ENST00000375597 FOXD4L4Q8WXT5 416 aaPredicted RBP15□□□□□ -0.01
MCF2L-202ENST00000375597 EXOSC9Q06265 439 aaKnown RBP14.99□□□□□ -0.01
MCF2L-202ENST00000375597 ABCA8O94911 1581 aa14.99□□□□□ -0.01
MCF2L-202ENST00000375597 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
MCF2L-202ENST00000375597 ABCC10Q5T3U5 1492 aa14.99□□□□□ -0.01
MCF2L-202ENST00000375597 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-202ENST00000375597 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
MCF2L-202ENST00000375597 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
MCF2L-202ENST00000375597 CFAP53Q96M91 514 aa14.98□□□□□ -0.01
MCF2L-202ENST00000375597 CCDC141Q6ZP82 1450 aa14.98□□□□□ -0.01
MCF2L-202ENST00000375597 RARSP54136 660 aaKnown RBP14.98□□□□□ -0.01
MCF2L-202ENST00000375597 HMOX1P09601 288 aa14.97□□□□□ -0.01
MCF2L-202ENST00000375597 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
MCF2L-202ENST00000375597 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
MCF2L-202ENST00000375597 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-202ENST00000375597 WASHC2CQ9Y4E1 1318 aa14.96□□□□□ -0.01
MCF2L-202ENST00000375597 HSP90AB1P08238 724 aaKnown RBP14.95□□□□□ -0.02
MCF2L-202ENST00000375597 FOXD4L6Q3SYB3 417 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-202ENST00000375597 FOXD4L3Q6VB84 417 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-202ENST00000375597 RWDD1Q9H446 243 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-202ENST00000375597 ARHGEF5Q12774 1597 aa14.95□□□□□ -0.02
MCF2L-202ENST00000375597 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
MCF2L-202ENST00000375597 E9PCH4 1651 aa14.94□□□□□ -0.02
MCF2L-202ENST00000375597 C22orf23Q9BZE7 217 aa14.94□□□□□ -0.02
MCF2L-202ENST00000375597 CHD1O14646 1710 aa14.93□□□□□ -0.02
MCF2L-202ENST00000375597 NOL8Q76FK4 1167 aaKnown RBP14.93□□□□□ -0.02
MCF2L-202ENST00000375597 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
MCF2L-202ENST00000375597 SCAPERQ9BY12 1400 aa14.93□□□□□ -0.02
MCF2L-202ENST00000375597 NSD3Q9BZ95 1437 aa14.93□□□□□ -0.02
MCF2L-202ENST00000375597 GOLGA6L3A6NEY3 463 aa14.93□□□□□ -0.02
MCF2L-202ENST00000375597 DZIP1LQ8IYY4 767 aaKnown RBP14.93□□□□□ -0.02
MCF2L-202ENST00000375597 NKTRP30414 1462 aaKnown RBP14.92□□□□□ -0.02
MCF2L-202ENST00000375597 RSPH4AQ5TD94 716 aa14.92□□□□□ -0.02
MCF2L-202ENST00000375597 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
MCF2L-202ENST00000375597 HSCBQ8IWL3 235 aa14.92□□□□□ -0.02
MCF2L-202ENST00000375597 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-202ENST00000375597 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
MCF2L-202ENST00000375597 RRAGDQ9NQL2 400 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-202ENST00000375597 NOB1Q9ULX3 412 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms