RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 COL17A1Q9UMD9 1497 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-203ENST00000375315 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-203ENST00000375315 MS4A1P11836 297 aa15.99■□□□□ 0.15
C9orf3-203ENST00000375315 BACH2Q9BYV9 841 aa15.98■□□□□ 0.15
C9orf3-203ENST00000375315 CFAP70Q5T0N1 1121 aa15.97■□□□□ 0.15
C9orf3-203ENST00000375315 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
C9orf3-203ENST00000375315 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
C9orf3-203ENST00000375315 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
C9orf3-203ENST00000375315 UNC13BO14795 1591 aa15.96■□□□□ 0.15
C9orf3-203ENST00000375315 ZMYND15Q9H091 742 aa15.96■□□□□ 0.15
C9orf3-203ENST00000375315 MLH3Q9UHC1 1453 aa15.96■□□□□ 0.15
C9orf3-203ENST00000375315 HECW2Q9P2P5 1572 aa15.95■□□□□ 0.14
C9orf3-203ENST00000375315 ATP10AO60312 1499 aa15.95■□□□□ 0.14
C9orf3-203ENST00000375315 ADGRF5Q8IZF2 1346 aa15.95■□□□□ 0.14
C9orf3-203ENST00000375315 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
C9orf3-203ENST00000375315 IDI1Q13907 227 aa15.94■□□□□ 0.14
C9orf3-203ENST00000375315 SAFB2Q14151 953 aaKnown RBP eCLIP15.94■□□□□ 0.14
C9orf3-203ENST00000375315 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
C9orf3-203ENST00000375315 IQGAP3Q86VI3 1631 aa15.94■□□□□ 0.14
C9orf3-203ENST00000375315 ABCA6Q8N139 1617 aa15.94■□□□□ 0.14
C9orf3-203ENST00000375315 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
C9orf3-203ENST00000375315 CEBPAP49715 358 aaPredicted RBP15.92■□□□□ 0.14
C9orf3-203ENST00000375315 E9PCH4 1651 aa15.91■□□□□ 0.14
C9orf3-203ENST00000375315 CFAP74Q9C0B2 1584 aa15.91■□□□□ 0.14
C9orf3-203ENST00000375315 NPATQ14207 1427 aa15.91■□□□□ 0.14
C9orf3-203ENST00000375315 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
C9orf3-203ENST00000375315 FRMPD1Q5SYB0 1578 aa15.91■□□□□ 0.14
C9orf3-203ENST00000375315 STK26Q9P289 416 aa15.9■□□□□ 0.14
C9orf3-203ENST00000375315 KDM5CP41229 1560 aa15.9■□□□□ 0.14
C9orf3-203ENST00000375315 TRAK1Q9UPV9 953 aa15.9■□□□□ 0.14
C9orf3-203ENST00000375315 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
C9orf3-203ENST00000375315 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
C9orf3-203ENST00000375315 PRAG1Q86YV5 1406 aa15.88■□□□□ 0.13
C9orf3-203ENST00000375315 CEP152O94986 1710 aa15.88■□□□□ 0.13
C9orf3-203ENST00000375315 DIP2CQ9Y2E4 1556 aa15.88■□□□□ 0.13
C9orf3-203ENST00000375315 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
C9orf3-203ENST00000375315 GLI2P10070 1586 aa15.86■□□□□ 0.13
C9orf3-203ENST00000375315 MROH1Q8NDA8 1641 aa15.86■□□□□ 0.13
C9orf3-203ENST00000375315 RICTORQ6R327 1708 aa15.84■□□□□ 0.13
C9orf3-203ENST00000375315 NOS1P29475 1434 aa15.84■□□□□ 0.13
C9orf3-203ENST00000375315 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
C9orf3-203ENST00000375315 HSP90AA2PQ14568 343 aaPredicted RBP15.84■□□□□ 0.13
C9orf3-203ENST00000375315 CLTCL1P53675 1640 aa15.84■□□□□ 0.13
C9orf3-203ENST00000375315 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.13
C9orf3-203ENST00000375315 RRP9O43818 475 aaKnown RBP15.83■□□□□ 0.12
C9orf3-203ENST00000375315 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.12
C9orf3-203ENST00000375315 RRP1P56182 461 aaKnown RBP15.82■□□□□ 0.12
C9orf3-203ENST00000375315 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
C9orf3-203ENST00000375315 PTPRTO14522 1441 aa15.82■□□□□ 0.12
C9orf3-203ENST00000375315 KIF13AQ9H1H9 1805 aa15.82■□□□□ 0.12
C9orf3-203ENST00000375315 TET3O43151 1660 aa15.81■□□□□ 0.12
C9orf3-203ENST00000375315 RALGAPBQ86X10 1494 aa15.81■□□□□ 0.12
C9orf3-203ENST00000375315 ABCC3O15438 1527 aa15.81■□□□□ 0.12
C9orf3-203ENST00000375315 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
C9orf3-203ENST00000375315 CC2D1BQ5T0F9 858 aaKnown RBP15.81■□□□□ 0.12
C9orf3-203ENST00000375315 EFCAB6Q5THR3 1501 aa15.8■□□□□ 0.12
C9orf3-203ENST00000375315 HSP90AA1P07900 732 aaKnown RBP15.79■□□□□ 0.12
C9orf3-203ENST00000375315 TRPM2O94759 1503 aa15.79■□□□□ 0.12
C9orf3-203ENST00000375315 DEPDC5O75140 1603 aa15.79■□□□□ 0.12
C9orf3-203ENST00000375315 FRAT2O75474 233 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-203ENST00000375315 SLC4A3P48751 1232 aa15.78■□□□□ 0.12
C9orf3-203ENST00000375315 NAP1L5Q96NT1 182 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-203ENST00000375315 SPHKAPQ2M3C7 1700 aa15.78■□□□□ 0.12
C9orf3-203ENST00000375315 TMF1P82094 1093 aa15.78■□□□□ 0.12
C9orf3-203ENST00000375315 RRAGDQ9NQL2 400 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-203ENST00000375315 DISP3Q9P2K9 1392 aa15.78■□□□□ 0.12
C9orf3-203ENST00000375315 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
C9orf3-203ENST00000375315 L1TD1Q5T7N2 865 aaKnown RBP15.77■□□□□ 0.11
C9orf3-203ENST00000375315 VWDEQ8N2E2 1590 aa15.76■□□□□ 0.11
C9orf3-203ENST00000375315 TESK2Q96S53 571 aa15.76■□□□□ 0.11
C9orf3-203ENST00000375315 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
C9orf3-203ENST00000375315 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
C9orf3-203ENST00000375315 PANK3Q9H999 370 aa15.75■□□□□ 0.11
C9orf3-203ENST00000375315 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
C9orf3-203ENST00000375315 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-203ENST00000375315 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
C9orf3-203ENST00000375315 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
C9orf3-203ENST00000375315 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
C9orf3-203ENST00000375315 ZMYM3Q14202 1370 aa15.73■□□□□ 0.11
C9orf3-203ENST00000375315 RCAN3Q9UKA8 241 aa15.73■□□□□ 0.11
C9orf3-203ENST00000375315 SIGLEC1Q9BZZ2 1709 aa15.7■□□□□ 0.1
C9orf3-203ENST00000375315 MINK1Q8N4C8 1332 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-203ENST00000375315 POGKQ9P215 609 aa15.69■□□□□ 0.1
C9orf3-203ENST00000375315 CAMSAP1Q5T5Y3 1602 aa15.69■□□□□ 0.1
C9orf3-203ENST00000375315 TNNT2P45379 298 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-203ENST00000375315 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
C9orf3-203ENST00000375315 PNISRQ8TF01 805 aaKnown RBP15.68■□□□□ 0.1
C9orf3-203ENST00000375315 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
C9orf3-203ENST00000375315 MROH2AA6NES4 1674 aa15.67■□□□□ 0.1
C9orf3-203ENST00000375315 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
C9orf3-203ENST00000375315 LMTK2Q8IWU2 1503 aa15.67■□□□□ 0.1
C9orf3-203ENST00000375315 CLCN1P35523 988 aa15.67■□□□□ 0.1
C9orf3-203ENST00000375315 KIF1BO60333 1816 aa15.67■□□□□ 0.1
C9orf3-203ENST00000375315 ZMYM4Q5VZL5 1548 aa15.66■□□□□ 0.1
C9orf3-203ENST00000375315 SLC26A8Q96RN1 970 aa15.66■□□□□ 0.1
C9orf3-203ENST00000375315 CENPJQ9HC77 1338 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-203ENST00000375315 WAPLQ7Z5K2 1190 aa15.66■□□□□ 0.1
C9orf3-203ENST00000375315 CABP2Q9NPB3 220 aa15.66■□□□□ 0.1
C9orf3-203ENST00000375315 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
C9orf3-203ENST00000375315 SYNMO15061 1565 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms