RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 IPO4Q8TEX9 1081 aaKnown RBP7.99□□□□□ -1.13
UBR4-204ENST00000375254 TSPY26PQ9H489 355 aa7.99□□□□□ -1.13
UBR4-204ENST00000375254 MNAT1P51948 309 aa7.99□□□□□ -1.13
UBR4-204ENST00000375254 MFAP1P55081 439 aaKnown RBP7.99□□□□□ -1.13
UBR4-204ENST00000375254 PSMD1Q99460 953 aa7.99□□□□□ -1.13
UBR4-204ENST00000375254 ERLIN2O94905 339 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 ZBED9Q6R2W3 1325 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 DNAAF4Q8WXU2 420 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 CLSTN1O94985 981 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 SUDS3Q9H7L9 328 aaPredicted RBP7.98□□□□□ -1.13
UBR4-204ENST00000375254 KRT222Q8N1A0 295 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 MPHOSPH10O00566 681 aaKnown RBP7.98□□□□□ -1.13
UBR4-204ENST00000375254 OS9Q13438 667 aaPredicted RBP7.98□□□□□ -1.13
UBR4-204ENST00000375254 NOL10Q9BSC4 688 aaKnown RBP7.98□□□□□ -1.13
UBR4-204ENST00000375254 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
UBR4-204ENST00000375254 CAVIN2O95810 425 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 FYB1O15117 783 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 CCDC94Q9BW85 323 aaPredicted RBP7.97□□□□□ -1.13
UBR4-204ENST00000375254 CCDC146Q8IYE0 955 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 TSPY4P0CV99 314 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 TSPY10P0CW01 314 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 MAP9Q49MG5 647 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 OGFRQ9NZT2 677 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 CGNL1Q0VF96 1302 aa7.97□□□□□ -1.13
UBR4-204ENST00000375254 MCM4P33991 863 aa7.96□□□□□ -1.13
UBR4-204ENST00000375254 AKAP17AQ02040 695 aaKnown RBP7.96□□□□□ -1.13
UBR4-204ENST00000375254 CARD11Q9BXL7 1154 aa7.96□□□□□ -1.14
UBR4-204ENST00000375254 SHTN1A0MZ66 631 aa7.96□□□□□ -1.14
UBR4-204ENST00000375254 CCDC192P0DO97 292 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 A0A1B0GUA9 196 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 JAKMIP3Q5VZ66 844 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 FMNL3Q8IVF7 1028 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 CBX1P83916 185 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 SH2D4BQ5SQS7 431 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 MRVI1Q9Y6F6 885 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 LRRCC1Q9C099 1032 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 H3BQV1 296 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 IFFO2Q5TF58 517 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 CLASRPQ8N2M8 674 aaKnown RBP7.95□□□□□ -1.14
UBR4-204ENST00000375254 BACH2Q9BYV9 841 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 PDCP20941 246 aa7.95□□□□□ -1.14
UBR4-204ENST00000375254 AEBP1Q8IUX7 1158 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 EZRP15311 586 aaKnown RBP7.94□□□□□ -1.14
UBR4-204ENST00000375254 RBM25P49756 843 aaKnown RBP7.94□□□□□ -1.14
UBR4-204ENST00000375254 FAM114A1Q8IWE2 563 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 KIF7Q2M1P5 1343 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 A0A1B0GUL7 405 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 NLRP13Q86W25 1043 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 TRIM5Q9C035 493 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 DNAJC21Q5F1R6 531 aaKnown RBP7.94□□□□□ -1.14
UBR4-204ENST00000375254 PLEKHD1A6NEE1 506 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 NUTM1Q86Y26 1132 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 CCDC83Q8IWF9 413 aa7.94□□□□□ -1.14
UBR4-204ENST00000375254 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.94□□□□□ -1.14
UBR4-204ENST00000375254 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.94□□□□□ -1.144e-7■■■□□ 16.7
UBR4-204ENST00000375254 ZBTB7CA1YPR0 619 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 UVSSAQ2YD98 709 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 MYCBPQ99417 103 aaPredicted RBP7.93□□□□□ -1.14
UBR4-204ENST00000375254 EFCC1Q9HA90 598 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 SRRTQ9BXP5 876 aaKnown RBP7.93□□□□□ -1.14
UBR4-204ENST00000375254 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 TULP1O00294 542 aaPredicted RBP7.93□□□□□ -1.14
UBR4-204ENST00000375254 WDR66Q8TBY9 1149 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 ENOX2Q16206 610 aaKnown RBP7.93□□□□□ -1.14
UBR4-204ENST00000375254 ANKRD18AQ8IVF6 992 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 C22orf23Q9BZE7 217 aa7.93□□□□□ -1.14
UBR4-204ENST00000375254 PPP1R15AO75807 674 aaPredicted RBP7.93□□□□□ -1.14
UBR4-204ENST00000375254 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 ZNF526Q8TF50 670 aaPredicted RBP7.92□□□□□ -1.14
UBR4-204ENST00000375254 SMARCE1Q969G3 411 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 TMF1P82094 1093 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 FRAT2O75474 233 aaPredicted RBP7.92□□□□□ -1.14
UBR4-204ENST00000375254 E9PSI1 815 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 SLC4A3P48751 1232 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 CFAP57Q96MR6 1250 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 PIP4K2AP48426 406 aaPredicted RBP7.92□□□□□ -1.14
UBR4-204ENST00000375254 LRCH2Q5VUJ6 765 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 KIF3BO15066 747 aa7.92□□□□□ -1.14
UBR4-204ENST00000375254 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
UBR4-204ENST00000375254 RRP1P56182 461 aaKnown RBP7.92□□□□□ -1.14
UBR4-204ENST00000375254 LUC7LQ9NQ29 371 aaKnown RBP7.92□□□□□ -1.14
UBR4-204ENST00000375254 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
UBR4-204ENST00000375254 UTP14CQ5TAP6 766 aaKnown RBP7.91□□□□□ -1.14
UBR4-204ENST00000375254 CPLX2Q6PUV4 134 aaKnown RBP7.91□□□□□ -1.14
UBR4-204ENST00000375254 CCDC47Q96A33 483 aaKnown RBP7.91□□□□□ -1.14
UBR4-204ENST00000375254 OLFM4Q6UX06 510 aa7.91□□□□□ -1.14
UBR4-204ENST00000375254 KDM2AQ9Y2K7 1162 aa7.91□□□□□ -1.14
UBR4-204ENST00000375254 OFD1O75665 1012 aa7.91□□□□□ -1.14
UBR4-204ENST00000375254 LRRFIP1Q32MZ4 808 aaKnown RBP7.91□□□□□ -1.14
UBR4-204ENST00000375254 MCTP1Q6DN14 999 aa7.91□□□□□ -1.14
UBR4-204ENST00000375254 RBBP5Q15291 538 aaKnown RBP7.91□□□□□ -1.14
UBR4-204ENST00000375254 TTC31Q49AM3 519 aaPredicted RBP7.9□□□□□ -1.14
UBR4-204ENST00000375254 GABPB1Q06547 395 aaPredicted RBP7.9□□□□□ -1.14
UBR4-204ENST00000375254 RUFY2Q8WXA3 655 aa7.9□□□□□ -1.14
UBR4-204ENST00000375254 TRIM6-TRIM34B2RNG4 842 aa7.9□□□□□ -1.14
UBR4-204ENST00000375254 RSRC1Q96IZ7 334 aaKnown RBP7.9□□□□□ -1.14
UBR4-204ENST00000375254 TRIM34Q9BYJ4 488 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms