RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 ATP10AO60312 1499 aa17.16■□□□□ 0.34
LINC01993-201ENST00000374945 DDRGK1Q96HY6 314 aa17.16■□□□□ 0.34
LINC01993-201ENST00000374945 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
LINC01993-201ENST00000374945 SKAP1Q86WV1 359 aa17.15■□□□□ 0.34
LINC01993-201ENST00000374945 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
LINC01993-201ENST00000374945 RALBP1Q15311 655 aa17.14■□□□□ 0.33
LINC01993-201ENST00000374945 ZNF518AQ6AHZ1 1483 aa17.14■□□□□ 0.33
LINC01993-201ENST00000374945 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
LINC01993-201ENST00000374945 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
LINC01993-201ENST00000374945 KANK1Q14678 1352 aa17.13■□□□□ 0.33
LINC01993-201ENST00000374945 TRPM1Q7Z4N2 1603 aa17.12■□□□□ 0.33
LINC01993-201ENST00000374945 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
LINC01993-201ENST00000374945 FRAT1Q92837 279 aaPredicted RBP17.11■□□□□ 0.33
LINC01993-201ENST00000374945 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
LINC01993-201ENST00000374945 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
LINC01993-201ENST00000374945 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
LINC01993-201ENST00000374945 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
LINC01993-201ENST00000374945 PARD3Q8TEW0 1356 aa17.09■□□□□ 0.33
LINC01993-201ENST00000374945 PLIN1O60240 522 aa17.09■□□□□ 0.33
LINC01993-201ENST00000374945 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
LINC01993-201ENST00000374945 DEPDC5O75140 1603 aa17.09■□□□□ 0.33
LINC01993-201ENST00000374945 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
LINC01993-201ENST00000374945 DISP3Q9P2K9 1392 aa17.07■□□□□ 0.32
LINC01993-201ENST00000374945 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
LINC01993-201ENST00000374945 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
LINC01993-201ENST00000374945 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
LINC01993-201ENST00000374945 KDM2BQ8NHM5 1336 aa17.06■□□□□ 0.32
LINC01993-201ENST00000374945 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
LINC01993-201ENST00000374945 RIMBP3CA6NJZ7 1639 aa17.06■□□□□ 0.32
LINC01993-201ENST00000374945 RIMBP3BA6NNM3 1639 aa17.06■□□□□ 0.32
LINC01993-201ENST00000374945 RIMBP3Q9UFD9 1639 aa17.06■□□□□ 0.32
LINC01993-201ENST00000374945 TESK2Q96S53 571 aa17.06■□□□□ 0.32
LINC01993-201ENST00000374945 TRPM2O94759 1503 aa17.06■□□□□ 0.32
LINC01993-201ENST00000374945 TET3O43151 1660 aa17.05■□□□□ 0.32
LINC01993-201ENST00000374945 CEP152O94986 1710 aa17.05■□□□□ 0.32
LINC01993-201ENST00000374945 FRMPD1Q5SYB0 1578 aa17.05■□□□□ 0.32
LINC01993-201ENST00000374945 PRDM15P57071 1507 aaPredicted RBP17.05■□□□□ 0.32
LINC01993-201ENST00000374945 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
LINC01993-201ENST00000374945 PTPRTO14522 1441 aa17.04■□□□□ 0.32
LINC01993-201ENST00000374945 CFAP70Q5T0N1 1121 aa17.04■□□□□ 0.32
LINC01993-201ENST00000374945 ADGRF5Q8IZF2 1346 aa17.04■□□□□ 0.32
LINC01993-201ENST00000374945 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
LINC01993-201ENST00000374945 INSRP06213 1382 aa17.03■□□□□ 0.32
LINC01993-201ENST00000374945 ABCA6Q8N139 1617 aa17.03■□□□□ 0.32
LINC01993-201ENST00000374945 PPRC1Q5VV67 1664 aaKnown RBP17.03■□□□□ 0.32
LINC01993-201ENST00000374945 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
LINC01993-201ENST00000374945 TSPOAP1O95153 1857 aa17.03■□□□□ 0.32
LINC01993-201ENST00000374945 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
LINC01993-201ENST00000374945 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
LINC01993-201ENST00000374945 GPRASP1Q5JY77 1395 aa17.01■□□□□ 0.31
LINC01993-201ENST00000374945 C8orf34Q49A92 452 aa17■□□□□ 0.31
LINC01993-201ENST00000374945 CC2D1BQ5T0F9 858 aaKnown RBP17■□□□□ 0.31
LINC01993-201ENST00000374945 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
LINC01993-201ENST00000374945 NPATQ14207 1427 aa17■□□□□ 0.31
LINC01993-201ENST00000374945 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
LINC01993-201ENST00000374945 EFCAB6Q5THR3 1501 aa16.99■□□□□ 0.31
LINC01993-201ENST00000374945 MADDQ8WXG6 1647 aa16.98■□□□□ 0.31
LINC01993-201ENST00000374945 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
LINC01993-201ENST00000374945 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
LINC01993-201ENST00000374945 FRAT2O75474 233 aaPredicted RBP16.97■□□□□ 0.31
LINC01993-201ENST00000374945 PANK3Q9H999 370 aa16.97■□□□□ 0.31
LINC01993-201ENST00000374945 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
LINC01993-201ENST00000374945 CFAP74Q9C0B2 1584 aa16.97■□□□□ 0.31
LINC01993-201ENST00000374945 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
LINC01993-201ENST00000374945 NEO1Q92859 1461 aa16.96■□□□□ 0.31
LINC01993-201ENST00000374945 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.3
LINC01993-201ENST00000374945 TMF1P82094 1093 aa16.95■□□□□ 0.3
LINC01993-201ENST00000374945 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
LINC01993-201ENST00000374945 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
LINC01993-201ENST00000374945 MLECQ14165 292 aa16.95■□□□□ 0.3
LINC01993-201ENST00000374945 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
LINC01993-201ENST00000374945 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
LINC01993-201ENST00000374945 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
LINC01993-201ENST00000374945 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
LINC01993-201ENST00000374945 NOS1P29475 1434 aa16.93■□□□□ 0.3
LINC01993-201ENST00000374945 MAP3K4Q9Y6R4 1608 aa16.93■□□□□ 0.3
LINC01993-201ENST00000374945 RSPH6AQ9H0K4 717 aa16.92■□□□□ 0.3
LINC01993-201ENST00000374945 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
LINC01993-201ENST00000374945 ABCC3O15438 1527 aa16.91■□□□□ 0.3
LINC01993-201ENST00000374945 FBXO31Q5XUX0 539 aaPredicted RBP16.91■□□□□ 0.3
LINC01993-201ENST00000374945 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
LINC01993-201ENST00000374945 KIF1BO60333 1816 aa16.9■□□□□ 0.3
LINC01993-201ENST00000374945 DIP2BQ9P265 1576 aa16.89■□□□□ 0.29
LINC01993-201ENST00000374945 SIGLEC1Q9BZZ2 1709 aa16.89■□□□□ 0.29
LINC01993-201ENST00000374945 IDI1Q13907 227 aa16.88■□□□□ 0.29
LINC01993-201ENST00000374945 LAMC1P11047 1609 aa16.87■□□□□ 0.29
LINC01993-201ENST00000374945 SCAF11Q99590 1463 aaKnown RBP16.87■□□□□ 0.29
LINC01993-201ENST00000374945 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
LINC01993-201ENST00000374945 LMTK2Q8IWU2 1503 aa16.87■□□□□ 0.29
LINC01993-201ENST00000374945 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.29
LINC01993-201ENST00000374945 DUSP27Q5VZP5 1158 aa16.86■□□□□ 0.29
LINC01993-201ENST00000374945 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
LINC01993-201ENST00000374945 USP19O94966 1318 aa16.85■□□□□ 0.29
LINC01993-201ENST00000374945 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
LINC01993-201ENST00000374945 ZNF521Q96K83 1311 aa16.84■□□□□ 0.29
LINC01993-201ENST00000374945 ADGRB3O60242 1522 aa16.83■□□□□ 0.28
LINC01993-201ENST00000374945 RGS3P49796 1198 aa16.82■□□□□ 0.28
LINC01993-201ENST00000374945 POGKQ9P215 609 aa16.82■□□□□ 0.28
LINC01993-201ENST00000374945 ADAMTS8Q9UP79 889 aa16.82■□□□□ 0.28
LINC01993-201ENST00000374945 SYNMO15061 1565 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms