RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 TPM1P09493 284 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 UQCRHLA0A096LP55 91 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 UQCRHP07919 91 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 AP1ARQ63HQ0 302 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 RASSF4Q9H2L5 321 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 FAM114A1Q8IWE2 563 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 A0A1B0GUA9 196 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 ZNF853P0CG23 659 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
ABCA1-202ENST00000374736 ENOX2Q16206 610 aaKnown RBP10.66□□□□□ -0.7
ABCA1-202ENST00000374736 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
ABCA1-202ENST00000374736 ZSCAN30Q86W11 494 aa10.65□□□□□ -0.7
ABCA1-202ENST00000374736 MNAT1P51948 309 aa10.65□□□□□ -0.7
ABCA1-202ENST00000374736 ZNHIT6Q9NWK9 470 aaKnown RBP10.65□□□□□ -0.7
ABCA1-202ENST00000374736 RBBP5Q15291 538 aaKnown RBP10.65□□□□□ -0.7
ABCA1-202ENST00000374736 DNAAF4Q8WXU2 420 aa10.65□□□□□ -0.71
ABCA1-202ENST00000374736 EFCC1Q9HA90 598 aa10.65□□□□□ -0.71
ABCA1-202ENST00000374736 SH2D4BQ5SQS7 431 aa10.64□□□□□ -0.71
ABCA1-202ENST00000374736 UIMC1Q96RL1 719 aa10.64□□□□□ -0.71
ABCA1-202ENST00000374736 IRX6P78412 446 aaPredicted RBP10.64□□□□□ -0.71
ABCA1-202ENST00000374736 ZBTB17Q13105 803 aa10.64□□□□□ -0.71
ABCA1-202ENST00000374736 RAD21O60216 631 aa10.63□□□□□ -0.71
ABCA1-202ENST00000374736 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
ABCA1-202ENST00000374736 NBPF3Q9H094 633 aa10.63□□□□□ -0.71
ABCA1-202ENST00000374736 NASPP49321 788 aaPredicted RBP10.63□□□□□ -0.71
ABCA1-202ENST00000374736 NUCB2P80303 420 aa10.63□□□□□ -0.71
ABCA1-202ENST00000374736 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
ABCA1-202ENST00000374736 MICALCLQ6ZW33 695 aa10.63□□□□□ -0.71
ABCA1-202ENST00000374736 GABPB1Q06547 395 aaPredicted RBP10.62□□□□□ -0.71
ABCA1-202ENST00000374736 YY1AP1Q9H869 796 aa10.62□□□□□ -0.71
ABCA1-202ENST00000374736 FEZ1Q99689 392 aa10.61□□□□□ -0.71
ABCA1-202ENST00000374736 SASS6Q6UVJ0 657 aa10.61□□□□□ -0.71
ABCA1-202ENST00000374736 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
ABCA1-202ENST00000374736 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
ABCA1-202ENST00000374736 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
ABCA1-202ENST00000374736 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
ABCA1-202ENST00000374736 SEPT6Q14141 434 aa10.61□□□□□ -0.71
ABCA1-202ENST00000374736 NFKBIBQ15653 356 aa10.6□□□□□ -0.71
ABCA1-202ENST00000374736 DBN1Q16643 649 aa10.6□□□□□ -0.71
ABCA1-202ENST00000374736 CCDC175P0C221 793 aa10.6□□□□□ -0.71
ABCA1-202ENST00000374736 KIF3CO14782 793 aa10.59□□□□□ -0.71
ABCA1-202ENST00000374736 KIF2AO00139 706 aaPredicted RBP10.59□□□□□ -0.71
ABCA1-202ENST00000374736 ATP6V1AP38606 617 aa10.59□□□□□ -0.71
ABCA1-202ENST00000374736 ERCC3P19447 782 aa10.59□□□□□ -0.71
ABCA1-202ENST00000374736 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
ABCA1-202ENST00000374736 GEMIN8Q9NWZ8 242 aaKnown RBP10.59□□□□□ -0.71
ABCA1-202ENST00000374736 PDILTQ8N807 584 aa10.59□□□□□ -0.71
ABCA1-202ENST00000374736 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
ABCA1-202ENST00000374736 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
ABCA1-202ENST00000374736 CFAP65Q6ZU64 1925 aaKnown RBP10.58□□□□□ -0.72
ABCA1-202ENST00000374736 RNF214Q8ND24 703 aa10.58□□□□□ -0.72
ABCA1-202ENST00000374736 SPATA24Q86W54 205 aa10.58□□□□□ -0.72
ABCA1-202ENST00000374736 FRMD4BQ9Y2L6 1034 aa10.58□□□□□ -0.72
ABCA1-202ENST00000374736 TAX1BP1Q86VP1 789 aa10.58□□□□□ -0.72
ABCA1-202ENST00000374736 A0A1B0GUL7 405 aa10.58□□□□□ -0.72
ABCA1-202ENST00000374736 AKAP17AQ02040 695 aaKnown RBP10.58□□□□□ -0.72
ABCA1-202ENST00000374736 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
ABCA1-202ENST00000374736 MRS2Q9HD23 443 aa10.57□□□□□ -0.72
ABCA1-202ENST00000374736 TONSLQ96HA7 1378 aa10.57□□□□□ -0.72
ABCA1-202ENST00000374736 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
ABCA1-202ENST00000374736 RPAINQ86UA6 219 aa10.57□□□□□ -0.72
ABCA1-202ENST00000374736 CEP104O60308 925 aa10.57□□□□□ -0.72
ABCA1-202ENST00000374736 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
ABCA1-202ENST00000374736 SPATS2LQ9NUQ6 558 aaKnown RBP10.57□□□□□ -0.72
ABCA1-202ENST00000374736 NBPF20Q3BBV1 942 aa10.57□□□□□ -0.72
ABCA1-202ENST00000374736 EZRP15311 586 aaKnown RBP10.56□□□□□ -0.72
ABCA1-202ENST00000374736 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 CCDC172P0C7W6 258 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 MAP2K2P36507 400 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 CCDC38Q502W7 563 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 CASQ1P31415 396 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 DMTNQ08495 405 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
ABCA1-202ENST00000374736 SAMD1Q6SPF0 538 aaPredicted RBP10.56□□□□□ -0.72
ABCA1-202ENST00000374736 ANKRD18AQ8IVF6 992 aa10.56□□□□□ -0.72
ABCA1-202ENST00000374736 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
ABCA1-202ENST00000374736 ATP6V1DQ9Y5K8 247 aa10.55□□□□□ -0.72
ABCA1-202ENST00000374736 SECISBP2LQ93073 1101 aaKnown RBP10.55□□□□□ -0.72
ABCA1-202ENST00000374736 SEPT11Q9NVA2 429 aaKnown RBP10.55□□□□□ -0.72
ABCA1-202ENST00000374736 ERLIN1O75477 346 aa10.55□□□□□ -0.72
ABCA1-202ENST00000374736 KRT222Q8N1A0 295 aa10.55□□□□□ -0.72
ABCA1-202ENST00000374736 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
ABCA1-202ENST00000374736 CENPHQ9H3R5 247 aa10.54□□□□□ -0.72
ABCA1-202ENST00000374736 SYCP1Q15431 976 aa10.54□□□□□ -0.72
ABCA1-202ENST00000374736 PDCD2Q16342 344 aaPredicted RBP10.54□□□□□ -0.72
ABCA1-202ENST00000374736 DNAJC21Q5F1R6 531 aaKnown RBP10.53□□□□□ -0.72
ABCA1-202ENST00000374736 GBP6Q6ZN66 633 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 JAKMIP3Q5VZ66 844 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 NBPF11Q86T75 865 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 FEZ2Q9UHY8 353 aaPredicted RBP10.53□□□□□ -0.72
ABCA1-202ENST00000374736 MAPK8IP3Q9UPT6 1336 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 LOC105371045A0A1W2PR82 267 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 SATB1Q01826 763 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 TNNT1P13805 278 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 RABEP2Q9H5N1 569 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 PPM1EQ8WY54 764 aa10.53□□□□□ -0.72
ABCA1-202ENST00000374736 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.72
ABCA1-202ENST00000374736 ANKRD18BA2A2Z9 1011 aa10.52□□□□□ -0.72
ABCA1-202ENST00000374736 NBPF9Q3BBW0 867 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms