RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
PRPF4-201ENST00000374198 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
PRPF4-201ENST00000374198 GZF1Q9H116 711 aaPredicted RBP16.57■□□□□ 0.24
PRPF4-201ENST00000374198 ZMYM4Q5VZL5 1548 aa16.56■□□□□ 0.24
PRPF4-201ENST00000374198 PREX2Q70Z35 1606 aa16.56■□□□□ 0.24
PRPF4-201ENST00000374198 SEC24BO95487 1268 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 MCM4P33991 863 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 PRDM4Q9UKN5 801 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
PRPF4-201ENST00000374198 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
PRPF4-201ENST00000374198 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
PRPF4-201ENST00000374198 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
PRPF4-201ENST00000374198 E9PCH4 1651 aa16.54■□□□□ 0.24
PRPF4-201ENST00000374198 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
PRPF4-201ENST00000374198 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
PRPF4-201ENST00000374198 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
PRPF4-201ENST00000374198 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
PRPF4-201ENST00000374198 RICTORQ6R327 1708 aa16.53■□□□□ 0.24
PRPF4-201ENST00000374198 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
PRPF4-201ENST00000374198 POGZQ7Z3K3 1410 aa16.52■□□□□ 0.24
PRPF4-201ENST00000374198 RALGAPBQ86X10 1494 aa16.52■□□□□ 0.24
PRPF4-201ENST00000374198 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.23
PRPF4-201ENST00000374198 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
PRPF4-201ENST00000374198 GRPEL1Q9HAV7 217 aa16.51■□□□□ 0.23
PRPF4-201ENST00000374198 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
PRPF4-201ENST00000374198 TRAK2O60296 914 aa16.5■□□□□ 0.23
PRPF4-201ENST00000374198 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
PRPF4-201ENST00000374198 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
PRPF4-201ENST00000374198 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
PRPF4-201ENST00000374198 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
PRPF4-201ENST00000374198 PZPP20742 1482 aa16.49■□□□□ 0.23
PRPF4-201ENST00000374198 KDM4FA0A1W2PPD8 638 aa16.49■□□□□ 0.23
PRPF4-201ENST00000374198 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
PRPF4-201ENST00000374198 EIF3AQ14152 1382 aaKnown RBP16.48■□□□□ 0.23
PRPF4-201ENST00000374198 ZNF518AQ6AHZ1 1483 aa16.48■□□□□ 0.23
PRPF4-201ENST00000374198 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
PRPF4-201ENST00000374198 DAPK1P53355 1430 aa16.47■□□□□ 0.23
PRPF4-201ENST00000374198 ABCC1P33527 1531 aa16.47■□□□□ 0.23
PRPF4-201ENST00000374198 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
PRPF4-201ENST00000374198 ZFYVE16Q7Z3T8 1539 aa16.46■□□□□ 0.23
PRPF4-201ENST00000374198 ITSN2Q9NZM3 1697 aa16.46■□□□□ 0.23
PRPF4-201ENST00000374198 A0A0U1RQG5 324 aaPredicted RBP16.46■□□□□ 0.23
PRPF4-201ENST00000374198 IGHDP01880 384 aa16.46■□□□□ 0.23
PRPF4-201ENST00000374198 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRPF4-201ENST00000374198 AAMPQ13685 434 aa16.46■□□□□ 0.23
PRPF4-201ENST00000374198 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
PRPF4-201ENST00000374198 YEATS2Q9ULM3 1422 aa16.46■□□□□ 0.22
PRPF4-201ENST00000374198 SAMD9LQ8IVG5 1584 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 MAGI2Q86UL8 1455 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
PRPF4-201ENST00000374198 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
PRPF4-201ENST00000374198 ZNF644Q9H582 1327 aaPredicted RBP16.44■□□□□ 0.22
PRPF4-201ENST00000374198 SYCP2Q9BX26 1530 aa16.44■□□□□ 0.22
PRPF4-201ENST00000374198 ABCC5O15440 1437 aa16.43■□□□□ 0.22
PRPF4-201ENST00000374198 CHMP5Q9NZZ3 219 aa16.43■□□□□ 0.22
PRPF4-201ENST00000374198 PLEKHH1Q9ULM0 1364 aa16.42■□□□□ 0.22
PRPF4-201ENST00000374198 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
PRPF4-201ENST00000374198 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
PRPF4-201ENST00000374198 SPRYD3Q8NCJ5 442 aa16.41■□□□□ 0.22
PRPF4-201ENST00000374198 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
PRPF4-201ENST00000374198 ZNF521Q96K83 1311 aa16.4■□□□□ 0.22
PRPF4-201ENST00000374198 HECW2Q9P2P5 1572 aa16.4■□□□□ 0.22
PRPF4-201ENST00000374198 DDX11L8A8MPP1 907 aa16.4■□□□□ 0.22
PRPF4-201ENST00000374198 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
PRPF4-201ENST00000374198 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
PRPF4-201ENST00000374198 MAP7D2Q96T17 732 aa16.39■□□□□ 0.21
PRPF4-201ENST00000374198 ATP10AO60312 1499 aa16.39■□□□□ 0.21
PRPF4-201ENST00000374198 RIPK4P57078 832 aa16.38■□□□□ 0.21
PRPF4-201ENST00000374198 PKD2Q13563 968 aa16.38■□□□□ 0.21
PRPF4-201ENST00000374198 TERF1P54274 439 aa16.38■□□□□ 0.21
PRPF4-201ENST00000374198 OFD1O75665 1012 aa16.38■□□□□ 0.21
PRPF4-201ENST00000374198 MLECQ14165 292 aa16.38■□□□□ 0.21
PRPF4-201ENST00000374198 MLH3Q9UHC1 1453 aa16.37■□□□□ 0.21
PRPF4-201ENST00000374198 FGD1P98174 961 aa16.37■□□□□ 0.21
PRPF4-201ENST00000374198 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
PRPF4-201ENST00000374198 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
PRPF4-201ENST00000374198 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
PRPF4-201ENST00000374198 GAS2L3Q86XJ1 694 aa16.36■□□□□ 0.21
PRPF4-201ENST00000374198 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
PRPF4-201ENST00000374198 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
PRPF4-201ENST00000374198 TRMT2AQ8IZ69 625 aaKnown RBP16.34■□□□□ 0.21
PRPF4-201ENST00000374198 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
PRPF4-201ENST00000374198 BCAR3O75815 825 aa16.34■□□□□ 0.21
PRPF4-201ENST00000374198 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.34■□□□□ 0.21
PRPF4-201ENST00000374198 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
PRPF4-201ENST00000374198 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
PRPF4-201ENST00000374198 ZMYM3Q14202 1370 aa16.33■□□□□ 0.21
PRPF4-201ENST00000374198 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.21
PRPF4-201ENST00000374198 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.21
PRPF4-201ENST00000374198 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
PRPF4-201ENST00000374198 CCDC173Q0VFZ6 552 aa16.32■□□□□ 0.2
PRPF4-201ENST00000374198 KIDINS220Q9ULH0 1771 aa16.32■□□□□ 0.2
PRPF4-201ENST00000374198 FAM13BQ9NYF5 915 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms