RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 MAP3K4Q9Y6R4 1608 aa9.98□□□□□ -0.81
GARNL3-202ENST00000373387 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
GARNL3-202ENST00000373387 MROH2AA6NES4 1674 aa9.98□□□□□ -0.81
GARNL3-202ENST00000373387 RTEL1-TNFRSF6BF6WH68 1400 aa9.98□□□□□ -0.81
GARNL3-202ENST00000373387 SENP3-EIF4A1A0A087X0R7 540 aa9.97□□□□□ -0.81
GARNL3-202ENST00000373387 PLEKHH1Q9ULM0 1364 aa9.97□□□□□ -0.81
GARNL3-202ENST00000373387 ANP32AP39687 249 aaKnown RBP9.97□□□□□ -0.81
GARNL3-202ENST00000373387 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.81
GARNL3-202ENST00000373387 PDE4AP27815 886 aa9.96□□□□□ -0.82
GARNL3-202ENST00000373387 PANK3Q9H999 370 aa9.96□□□□□ -0.82
GARNL3-202ENST00000373387 TRAPPC8Q9Y2L5 1435 aa9.96□□□□□ -0.82
GARNL3-202ENST00000373387 MYOM2P54296 1465 aa9.96□□□□□ -0.82
GARNL3-202ENST00000373387 NRXN1Q9ULB1 1477 aa9.96□□□□□ -0.82
GARNL3-202ENST00000373387 KIF1BO60333 1816 aa9.95□□□□□ -0.82
GARNL3-202ENST00000373387 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-202ENST00000373387 FBLN2P98095 1184 aa9.95□□□□□ -0.82
GARNL3-202ENST00000373387 CNGB1Q14028 1251 aaPredicted RBP9.95□□□□□ -0.82
GARNL3-202ENST00000373387 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
GARNL3-202ENST00000373387 USP32Q8NFA0 1604 aa9.94□□□□□ -0.82
GARNL3-202ENST00000373387 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
GARNL3-202ENST00000373387 TMF1P82094 1093 aa9.93□□□□□ -0.82
GARNL3-202ENST00000373387 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
GARNL3-202ENST00000373387 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
GARNL3-202ENST00000373387 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
GARNL3-202ENST00000373387 PPLO60437 1756 aa9.92□□□□□ -0.82
GARNL3-202ENST00000373387 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
GARNL3-202ENST00000373387 PPRC1Q5VV67 1664 aaKnown RBP9.92□□□□□ -0.82
GARNL3-202ENST00000373387 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
GARNL3-202ENST00000373387 PPP2R1AP30153 589 aa9.91□□□□□ -0.82
GARNL3-202ENST00000373387 EFCAB6Q5THR3 1501 aa9.91□□□□□ -0.82
GARNL3-202ENST00000373387 CC2D1BQ5T0F9 858 aaKnown RBP9.91□□□□□ -0.82
GARNL3-202ENST00000373387 ADAMTS8Q9UP79 889 aa9.91□□□□□ -0.82
GARNL3-202ENST00000373387 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
GARNL3-202ENST00000373387 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
GARNL3-202ENST00000373387 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
GARNL3-202ENST00000373387 NBR1Q14596 966 aa9.9□□□□□ -0.82
GARNL3-202ENST00000373387 C20orf194Q5TEA3 1177 aa9.9□□□□□ -0.82
GARNL3-202ENST00000373387 PLIN1O60240 522 aa9.9□□□□□ -0.82
GARNL3-202ENST00000373387 KIDINS220Q9ULH0 1771 aa9.9□□□□□ -0.82
GARNL3-202ENST00000373387 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
GARNL3-202ENST00000373387 ADGRB3O60242 1522 aa9.89□□□□□ -0.83
GARNL3-202ENST00000373387 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
GARNL3-202ENST00000373387 QRICH2Q9H0J4 1663 aa9.88□□□□□ -0.83
GARNL3-202ENST00000373387 EIF3AQ14152 1382 aaKnown RBP9.88□□□□□ -0.83
GARNL3-202ENST00000373387 UGGT1Q9NYU2 1555 aa9.88□□□□□ -0.83
GARNL3-202ENST00000373387 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
GARNL3-202ENST00000373387 SLFN5Q08AF3 891 aa9.87□□□□□ -0.83
GARNL3-202ENST00000373387 SKAP1Q86WV1 359 aa9.87□□□□□ -0.83
GARNL3-202ENST00000373387 NKTRP30414 1462 aaKnown RBP9.87□□□□□ -0.83
GARNL3-202ENST00000373387 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
GARNL3-202ENST00000373387 SALL2Q9Y467 1007 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-202ENST00000373387 ADGRB1O14514 1584 aa9.86□□□□□ -0.83
GARNL3-202ENST00000373387 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
GARNL3-202ENST00000373387 CENPQQ7L2Z9 268 aaPredicted RBP9.85□□□□□ -0.83
GARNL3-202ENST00000373387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
GARNL3-202ENST00000373387 ADGRB2O60241 1585 aa9.84□□□□□ -0.83
GARNL3-202ENST00000373387 PIK3C2BO00750 1634 aa9.84□□□□□ -0.83
GARNL3-202ENST00000373387 FANCAO15360 1455 aa9.84□□□□□ -0.83
GARNL3-202ENST00000373387 ARHGEF28Q8N1W1 1705 aaKnown RBP9.84□□□□□ -0.83
GARNL3-202ENST00000373387 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-202ENST00000373387 FRMPD1Q5SYB0 1578 aa9.83□□□□□ -0.84
GARNL3-202ENST00000373387 EFCAB2Q5VUJ9 269 aa9.83□□□□□ -0.84
GARNL3-202ENST00000373387 POLR3AO14802 1390 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-202ENST00000373387 SIGLEC1Q9BZZ2 1709 aa9.83□□□□□ -0.84
GARNL3-202ENST00000373387 GOLGA2Q08379 1002 aa9.82□□□□□ -0.84
GARNL3-202ENST00000373387 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
GARNL3-202ENST00000373387 HECW2Q9P2P5 1572 aa9.82□□□□□ -0.84
GARNL3-202ENST00000373387 CDCA8Q53HL2 280 aa9.82□□□□□ -0.84
GARNL3-202ENST00000373387 ANKRD26Q9UPS8 1709 aa9.82□□□□□ -0.84
GARNL3-202ENST00000373387 KNSTRNQ9Y448 316 aa9.81□□□□□ -0.84
GARNL3-202ENST00000373387 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
GARNL3-202ENST00000373387 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
GARNL3-202ENST00000373387 PPM1GO15355 546 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-202ENST00000373387 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-202ENST00000373387 USP19O94966 1318 aa9.81□□□□□ -0.84
GARNL3-202ENST00000373387 NINLQ9Y2I6 1382 aa9.8□□□□□ -0.84
GARNL3-202ENST00000373387 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-202ENST00000373387 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
GARNL3-202ENST00000373387 NPM2Q86SE8 214 aaKnown RBP9.8□□□□□ -0.84
GARNL3-202ENST00000373387 NGEFQ8N5V2 710 aa9.8□□□□□ -0.84
GARNL3-202ENST00000373387 DMRT2Q9Y5R5 561 aa9.8□□□□□ -0.84
GARNL3-202ENST00000373387 SPAG9O60271 1321 aaKnown RBP9.8□□□□□ -0.84
GARNL3-202ENST00000373387 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
GARNL3-202ENST00000373387 CAMSAP1Q5T5Y3 1602 aa9.79□□□□□ -0.84
GARNL3-202ENST00000373387 NEFMP07197 916 aa9.78□□□□□ -0.84
GARNL3-202ENST00000373387 KANK1Q14678 1352 aa9.78□□□□□ -0.84
GARNL3-202ENST00000373387 WDR43Q15061 677 aaKnown RBP eCLIP9.78□□□□□ -0.84
GARNL3-202ENST00000373387 GLI2P10070 1586 aa9.78□□□□□ -0.84
GARNL3-202ENST00000373387 LAS1LQ9Y4W2 734 aaKnown RBP9.78□□□□□ -0.84
GARNL3-202ENST00000373387 CLTCQ00610 1675 aaKnown RBP9.77□□□□□ -0.84
GARNL3-202ENST00000373387 AFAP1Q8N556 730 aa9.77□□□□□ -0.84
GARNL3-202ENST00000373387 ADGRL1O94910 1474 aa9.77□□□□□ -0.85
GARNL3-202ENST00000373387 ADGRF5Q8IZF2 1346 aa9.77□□□□□ -0.85
GARNL3-202ENST00000373387 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.85
GARNL3-202ENST00000373387 CFAP74Q9C0B2 1584 aa9.77□□□□□ -0.85
GARNL3-202ENST00000373387 E9PSI1 815 aa9.76□□□□□ -0.85
GARNL3-202ENST00000373387 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
GARNL3-202ENST00000373387 NEXMIFQ5QGS0 1516 aa9.75□□□□□ -0.85
GARNL3-202ENST00000373387 BCAR3O75815 825 aa9.75□□□□□ -0.85
GARNL3-202ENST00000373387 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms