RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 CEP152O94986 1710 aa12.79□□□□□ -0.36
CSMD2-203ENST00000373377 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
CSMD2-203ENST00000373377 USP35Q9P2H5 1018 aa12.78□□□□□ -0.36
CSMD2-203ENST00000373377 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
CSMD2-203ENST00000373377 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.36
CSMD2-203ENST00000373377 SPHKAPQ2M3C7 1700 aa12.77□□□□□ -0.37
CSMD2-203ENST00000373377 FRAT2O75474 233 aaPredicted RBP12.77□□□□□ -0.37
CSMD2-203ENST00000373377 TET3O43151 1660 aa12.75□□□□□ -0.37
CSMD2-203ENST00000373377 KIDINS220Q9ULH0 1771 aa12.75□□□□□ -0.37
CSMD2-203ENST00000373377 PRDM15P57071 1507 aaPredicted RBP12.75□□□□□ -0.37
CSMD2-203ENST00000373377 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
CSMD2-203ENST00000373377 NEURL4Q96JN8 1562 aa12.74□□□□□ -0.37
CSMD2-203ENST00000373377 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
CSMD2-203ENST00000373377 KNSTRNQ9Y448 316 aa12.74□□□□□ -0.37
CSMD2-203ENST00000373377 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
CSMD2-203ENST00000373377 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
CSMD2-203ENST00000373377 DISP3Q9P2K9 1392 aa12.73□□□□□ -0.37
CSMD2-203ENST00000373377 SLKQ9H2G2 1235 aaPredicted RBP12.73□□□□□ -0.37
CSMD2-203ENST00000373377 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
CSMD2-203ENST00000373377 TMF1P82094 1093 aa12.73□□□□□ -0.37
CSMD2-203ENST00000373377 TRPM2O94759 1503 aa12.73□□□□□ -0.37
CSMD2-203ENST00000373377 IFT172Q9UG01 1749 aa12.72□□□□□ -0.37
CSMD2-203ENST00000373377 A2MP01023 1474 aa12.72□□□□□ -0.37
CSMD2-203ENST00000373377 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
CSMD2-203ENST00000373377 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
CSMD2-203ENST00000373377 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
CSMD2-203ENST00000373377 MADDQ8WXG6 1647 aa12.71□□□□□ -0.37
CSMD2-203ENST00000373377 BCAR3O75815 825 aa12.71□□□□□ -0.38
CSMD2-203ENST00000373377 CCDC144AA2RUR9 1427 aa12.71□□□□□ -0.38
CSMD2-203ENST00000373377 FANCAO15360 1455 aa12.7□□□□□ -0.38
CSMD2-203ENST00000373377 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
CSMD2-203ENST00000373377 ASXL2Q76L83 1435 aa12.7□□□□□ -0.38
CSMD2-203ENST00000373377 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
CSMD2-203ENST00000373377 GOLGA2Q08379 1002 aa12.7□□□□□ -0.38
CSMD2-203ENST00000373377 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
CSMD2-203ENST00000373377 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
CSMD2-203ENST00000373377 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
CSMD2-203ENST00000373377 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.69□□□□□ -0.38
CSMD2-203ENST00000373377 APAF1O14727 1248 aa12.69□□□□□ -0.38
CSMD2-203ENST00000373377 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
CSMD2-203ENST00000373377 FRMPD1Q5SYB0 1578 aa12.68□□□□□ -0.38
CSMD2-203ENST00000373377 PTPRTO14522 1441 aa12.68□□□□□ -0.38
CSMD2-203ENST00000373377 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
CSMD2-203ENST00000373377 WASHC2CQ9Y4E1 1318 aa12.68□□□□□ -0.38
CSMD2-203ENST00000373377 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
CSMD2-203ENST00000373377 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
CSMD2-203ENST00000373377 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
CSMD2-203ENST00000373377 TESK2Q96S53 571 aa12.67□□□□□ -0.38
CSMD2-203ENST00000373377 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
CSMD2-203ENST00000373377 KIAA1210Q9ULL0 1709 aa12.66□□□□□ -0.38
CSMD2-203ENST00000373377 LMTK2Q8IWU2 1503 aa12.66□□□□□ -0.38
CSMD2-203ENST00000373377 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
CSMD2-203ENST00000373377 PPRC1Q5VV67 1664 aaKnown RBP12.66□□□□□ -0.38
CSMD2-203ENST00000373377 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
CSMD2-203ENST00000373377 EFCAB2Q5VUJ9 269 aa12.65□□□□□ -0.38
CSMD2-203ENST00000373377 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
CSMD2-203ENST00000373377 MROH2AA6NES4 1674 aa12.65□□□□□ -0.39
CSMD2-203ENST00000373377 ADGRL1O94910 1474 aa12.64□□□□□ -0.39
CSMD2-203ENST00000373377 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
CSMD2-203ENST00000373377 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
CSMD2-203ENST00000373377 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
CSMD2-203ENST00000373377 EFCAB6Q5THR3 1501 aa12.64□□□□□ -0.39
CSMD2-203ENST00000373377 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
CSMD2-203ENST00000373377 ABCA6Q8N139 1617 aa12.64□□□□□ -0.39
CSMD2-203ENST00000373377 RICTORQ6R327 1708 aa12.63□□□□□ -0.39
CSMD2-203ENST00000373377 SEC24BO95487 1268 aa12.63□□□□□ -0.39
CSMD2-203ENST00000373377 IGHDP01880 384 aa12.63□□□□□ -0.39
CSMD2-203ENST00000373377 POGKQ9P215 609 aa12.63□□□□□ -0.39
CSMD2-203ENST00000373377 HECW2Q9P2P5 1572 aa12.63□□□□□ -0.39
CSMD2-203ENST00000373377 CLUAP1Q96AJ1 413 aa12.62□□□□□ -0.39
CSMD2-203ENST00000373377 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
CSMD2-203ENST00000373377 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
CSMD2-203ENST00000373377 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
CSMD2-203ENST00000373377 POGZQ7Z3K3 1410 aa12.6□□□□□ -0.39
CSMD2-203ENST00000373377 KIF1BO60333 1816 aa12.59□□□□□ -0.39
CSMD2-203ENST00000373377 SLFN5Q08AF3 891 aa12.59□□□□□ -0.39
CSMD2-203ENST00000373377 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
CSMD2-203ENST00000373377 MYOM1P52179 1685 aa12.59□□□□□ -0.39
CSMD2-203ENST00000373377 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
CSMD2-203ENST00000373377 GLI2P10070 1586 aa12.58□□□□□ -0.4
CSMD2-203ENST00000373377 SIGLEC1Q9BZZ2 1709 aa12.58□□□□□ -0.4
CSMD2-203ENST00000373377 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
CSMD2-203ENST00000373377 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-203ENST00000373377 MYO3AQ8NEV4 1616 aa12.57□□□□□ -0.4
CSMD2-203ENST00000373377 TNNQ9UQP3 1299 aa12.56□□□□□ -0.4
CSMD2-203ENST00000373377 PIK3C2BO00750 1634 aa12.56□□□□□ -0.4
CSMD2-203ENST00000373377 SPAG9O60271 1321 aaKnown RBP12.56□□□□□ -0.4
CSMD2-203ENST00000373377 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
CSMD2-203ENST00000373377 PPLO60437 1756 aa12.56□□□□□ -0.4
CSMD2-203ENST00000373377 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
CSMD2-203ENST00000373377 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
CSMD2-203ENST00000373377 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
CSMD2-203ENST00000373377 ZC3H13Q5T200 1668 aaKnown RBP12.56□□□□□ -0.4
CSMD2-203ENST00000373377 ADGRB3O60242 1522 aa12.55□□□□□ -0.4
CSMD2-203ENST00000373377 BECN1Q14457 450 aa12.55□□□□□ -0.4
CSMD2-203ENST00000373377 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
CSMD2-203ENST00000373377 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
CSMD2-203ENST00000373377 CENPJQ9HC77 1338 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-203ENST00000373377 MYOM2P54296 1465 aa12.55□□□□□ -0.4
CSMD2-203ENST00000373377 ZMYM4Q5VZL5 1548 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms