RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ITPRIPQ8IWB1 547 aa15.36■□□□□ 0.05
NCDN-202ENST00000373243 E9PSI1 815 aa15.35■□□□□ 0.05
NCDN-202ENST00000373243 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
NCDN-202ENST00000373243 DISP3Q9P2K9 1392 aa15.35■□□□□ 0.05
NCDN-202ENST00000373243 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
NCDN-202ENST00000373243 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
NCDN-202ENST00000373243 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
NCDN-202ENST00000373243 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
NCDN-202ENST00000373243 SMC4Q9NTJ3 1288 aa15.33■□□□□ 0.05
NCDN-202ENST00000373243 KIAA0556O60303 1618 aa15.33■□□□□ 0.05
NCDN-202ENST00000373243 SPATA31E1Q6ZUB1 1445 aa15.33■□□□□ 0.04
NCDN-202ENST00000373243 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
NCDN-202ENST00000373243 CYB5RLQ6IPT4 315 aa15.33■□□□□ 0.04
NCDN-202ENST00000373243 POGKQ9P215 609 aa15.33■□□□□ 0.04
NCDN-202ENST00000373243 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
NCDN-202ENST00000373243 ERBINQ96RT1 1412 aa15.32■□□□□ 0.04
NCDN-202ENST00000373243 PZPP20742 1482 aa15.32■□□□□ 0.04
NCDN-202ENST00000373243 NCLP19338 710 aaKnown RBP15.31■□□□□ 0.04
NCDN-202ENST00000373243 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
NCDN-202ENST00000373243 L1TD1Q5T7N2 865 aaKnown RBP15.31■□□□□ 0.04
NCDN-202ENST00000373243 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
NCDN-202ENST00000373243 KANK1Q14678 1352 aa15.31■□□□□ 0.04
NCDN-202ENST00000373243 ATP10BO94823 1461 aa15.31■□□□□ 0.04
NCDN-202ENST00000373243 TPRNQ4KMQ1 711 aa15.31■□□□□ 0.04
NCDN-202ENST00000373243 DENND4BO75064 1496 aaPredicted RBP15.3■□□□□ 0.04
NCDN-202ENST00000373243 ELL2O00472 640 aaPredicted RBP15.3■□□□□ 0.04
NCDN-202ENST00000373243 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
NCDN-202ENST00000373243 APBB1O00213 710 aa15.3■□□□□ 0.04
NCDN-202ENST00000373243 PER1O15534 1290 aaPredicted RBP15.29■□□□□ 0.04
NCDN-202ENST00000373243 SLC12A5Q9H2X9 1139 aa15.29■□□□□ 0.04
NCDN-202ENST00000373243 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
NCDN-202ENST00000373243 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
NCDN-202ENST00000373243 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
NCDN-202ENST00000373243 TCP11L2Q8N4U5 519 aa15.28■□□□□ 0.04
NCDN-202ENST00000373243 PMFBP1Q8TBY8 1022 aa15.28■□□□□ 0.04
NCDN-202ENST00000373243 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
NCDN-202ENST00000373243 RAPGEF6Q8TEU7 1601 aa15.27■□□□□ 0.04
NCDN-202ENST00000373243 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
NCDN-202ENST00000373243 HSCBQ8IWL3 235 aa15.27■□□□□ 0.04
NCDN-202ENST00000373243 TRIM44Q96DX7 344 aaPredicted RBP15.27■□□□□ 0.03
NCDN-202ENST00000373243 NUP160Q12769 1436 aa15.27■□□□□ 0.03
NCDN-202ENST00000373243 MTHFSP49914 203 aa15.27■□□□□ 0.03
NCDN-202ENST00000373243 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.03
NCDN-202ENST00000373243 TESK2Q96S53 571 aa15.26■□□□□ 0.03
NCDN-202ENST00000373243 ZHX1Q9UKY1 873 aaPredicted RBP15.26■□□□□ 0.03
NCDN-202ENST00000373243 SOX12O15370 315 aa15.26■□□□□ 0.03
NCDN-202ENST00000373243 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
NCDN-202ENST00000373243 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
NCDN-202ENST00000373243 IGHDP01880 384 aa15.24■□□□□ 0.03
NCDN-202ENST00000373243 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
NCDN-202ENST00000373243 KDM5BQ9UGL1 1544 aa15.24■□□□□ 0.03
NCDN-202ENST00000373243 ARHGAP5Q13017 1502 aa15.24■□□□□ 0.03
NCDN-202ENST00000373243 TSR2Q969E8 191 aaKnown RBP15.24■□□□□ 0.03
NCDN-202ENST00000373243 PDZRN3Q9UPQ7 1066 aa15.23■□□□□ 0.03
NCDN-202ENST00000373243 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
NCDN-202ENST00000373243 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
NCDN-202ENST00000373243 PARD3Q8TEW0 1356 aa15.22■□□□□ 0.03
NCDN-202ENST00000373243 RALGAPBQ86X10 1494 aa15.22■□□□□ 0.03
NCDN-202ENST00000373243 LRRIQ1Q96JM4 1722 aa15.22■□□□□ 0.03
NCDN-202ENST00000373243 GOLGA6L3A6NEY3 463 aa15.22■□□□□ 0.03
NCDN-202ENST00000373243 FAM13BQ9NYF5 915 aa15.22■□□□□ 0.03
NCDN-202ENST00000373243 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
NCDN-202ENST00000373243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
NCDN-202ENST00000373243 GGNBP2Q9H3C7 697 aa15.21■□□□□ 0.03
NCDN-202ENST00000373243 ZKSCAN2Q63HK3 967 aa15.21■□□□□ 0.02
NCDN-202ENST00000373243 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.02
NCDN-202ENST00000373243 RUNDC1Q96C34 613 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 PANK2Q9BZ23 570 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 TNNQ9UQP3 1299 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 KIF14Q15058 1648 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 WWC1Q8IX03 1113 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 CABP2Q9NPB3 220 aa15.2■□□□□ 0.02
NCDN-202ENST00000373243 CLCN1P35523 988 aa15.19■□□□□ 0.02
NCDN-202ENST00000373243 DZIP1LQ8IYY4 767 aaKnown RBP15.19■□□□□ 0.02
NCDN-202ENST00000373243 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
NCDN-202ENST00000373243 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
NCDN-202ENST00000373243 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
NCDN-202ENST00000373243 MINK1Q8N4C8 1332 aaPredicted RBP15.18■□□□□ 0.02
NCDN-202ENST00000373243 SEC24BO95487 1268 aa15.17■□□□□ 0.02
NCDN-202ENST00000373243 MLECQ14165 292 aa15.17■□□□□ 0.02
NCDN-202ENST00000373243 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
NCDN-202ENST00000373243 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
NCDN-202ENST00000373243 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
NCDN-202ENST00000373243 PAXIP1Q6ZW49 1069 aaPredicted RBP15.16■□□□□ 0.02
NCDN-202ENST00000373243 EXOSC9Q06265 439 aaKnown RBP15.16■□□□□ 0.02
NCDN-202ENST00000373243 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
NCDN-202ENST00000373243 GOLGA6L22H0YM25 854 aa15.15■□□□□ 0.02
NCDN-202ENST00000373243 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
NCDN-202ENST00000373243 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
NCDN-202ENST00000373243 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
NCDN-202ENST00000373243 CCDC141Q6ZP82 1450 aa15.15■□□□□ 0.02
NCDN-202ENST00000373243 C22orf23Q9BZE7 217 aa15.15■□□□□ 0.02
NCDN-202ENST00000373243 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
NCDN-202ENST00000373243 RIPK4P57078 832 aa15.14■□□□□ 0.01
NCDN-202ENST00000373243 GCC2Q8IWJ2 1684 aa15.14■□□□□ 0.01
NCDN-202ENST00000373243 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.01
NCDN-202ENST00000373243 RAPGEF3O95398 923 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms