RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
CTPS1-202ENST00000372621 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
CTPS1-202ENST00000372621 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
CTPS1-202ENST00000372621 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
CTPS1-202ENST00000372621 AFAP1Q8N556 730 aa16.89■□□□□ 0.29
CTPS1-202ENST00000372621 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
CTPS1-202ENST00000372621 KNSTRNQ9Y448 316 aa16.88■□□□□ 0.29
CTPS1-202ENST00000372621 ATP7AQ04656 1500 aa16.88■□□□□ 0.29
CTPS1-202ENST00000372621 MS4A1P11836 297 aa16.87■□□□□ 0.29
CTPS1-202ENST00000372621 NPC1L1Q9UHC9 1359 aa16.87■□□□□ 0.29
CTPS1-202ENST00000372621 PLIN1O60240 522 aa16.87■□□□□ 0.29
CTPS1-202ENST00000372621 CDCA8Q53HL2 280 aa16.87■□□□□ 0.29
CTPS1-202ENST00000372621 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
CTPS1-202ENST00000372621 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
CTPS1-202ENST00000372621 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
CTPS1-202ENST00000372621 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
CTPS1-202ENST00000372621 KDM5AP29375 1690 aaKnown RBP16.86■□□□□ 0.29
CTPS1-202ENST00000372621 PDE4AP27815 886 aa16.85■□□□□ 0.29
CTPS1-202ENST00000372621 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
CTPS1-202ENST00000372621 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
CTPS1-202ENST00000372621 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
CTPS1-202ENST00000372621 IFT172Q9UG01 1749 aa16.83■□□□□ 0.29
CTPS1-202ENST00000372621 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.29
CTPS1-202ENST00000372621 MYOM2P54296 1465 aa16.83■□□□□ 0.28
CTPS1-202ENST00000372621 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
CTPS1-202ENST00000372621 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
CTPS1-202ENST00000372621 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
CTPS1-202ENST00000372621 FANCAO15360 1455 aa16.82■□□□□ 0.28
CTPS1-202ENST00000372621 KANK1Q14678 1352 aa16.82■□□□□ 0.28
CTPS1-202ENST00000372621 KIF1BO60333 1816 aa16.81■□□□□ 0.28
CTPS1-202ENST00000372621 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTPS1-202ENST00000372621 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
CTPS1-202ENST00000372621 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
CTPS1-202ENST00000372621 DEKP35659 375 aaKnown RBP16.79■□□□□ 0.28
CTPS1-202ENST00000372621 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
CTPS1-202ENST00000372621 MYO3AQ8NEV4 1616 aa16.79■□□□□ 0.28
CTPS1-202ENST00000372621 NBR1Q14596 966 aa16.79■□□□□ 0.28
CTPS1-202ENST00000372621 KDM2BQ8NHM5 1336 aa16.78■□□□□ 0.28
CTPS1-202ENST00000372621 EFCAB6Q5THR3 1501 aa16.78■□□□□ 0.28
CTPS1-202ENST00000372621 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
CTPS1-202ENST00000372621 MROH2AA6NES4 1674 aa16.78■□□□□ 0.28
CTPS1-202ENST00000372621 TRMT2AQ8IZ69 625 aaKnown RBP16.77■□□□□ 0.28
CTPS1-202ENST00000372621 GOLGA2Q08379 1002 aa16.77■□□□□ 0.28
CTPS1-202ENST00000372621 ADGRL1O94910 1474 aa16.77■□□□□ 0.28
CTPS1-202ENST00000372621 KIF3BO15066 747 aa16.76■□□□□ 0.27
CTPS1-202ENST00000372621 PPRC1Q5VV67 1664 aaKnown RBP16.76■□□□□ 0.27
CTPS1-202ENST00000372621 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
CTPS1-202ENST00000372621 SLFN5Q08AF3 891 aa16.75■□□□□ 0.27
CTPS1-202ENST00000372621 SLC24A1O60721 1099 aa16.75■□□□□ 0.27
CTPS1-202ENST00000372621 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
CTPS1-202ENST00000372621 LMTK2Q8IWU2 1503 aa16.75■□□□□ 0.27
CTPS1-202ENST00000372621 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
CTPS1-202ENST00000372621 NPM2Q86SE8 214 aaKnown RBP16.73■□□□□ 0.27
CTPS1-202ENST00000372621 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
CTPS1-202ENST00000372621 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
CTPS1-202ENST00000372621 CARD14Q9BXL6 1004 aa16.72■□□□□ 0.27
CTPS1-202ENST00000372621 SETBP1Q9Y6X0 1596 aa16.72■□□□□ 0.27
CTPS1-202ENST00000372621 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
CTPS1-202ENST00000372621 CENPQQ7L2Z9 268 aaPredicted RBP16.71■□□□□ 0.27
CTPS1-202ENST00000372621 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
CTPS1-202ENST00000372621 ZC3H13Q5T200 1668 aaKnown RBP16.7■□□□□ 0.26
CTPS1-202ENST00000372621 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
CTPS1-202ENST00000372621 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
CTPS1-202ENST00000372621 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.68■□□□□ 0.26
CTPS1-202ENST00000372621 APAF1O14727 1248 aa16.68■□□□□ 0.26
CTPS1-202ENST00000372621 PPLO60437 1756 aa16.68■□□□□ 0.26
CTPS1-202ENST00000372621 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
CTPS1-202ENST00000372621 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
CTPS1-202ENST00000372621 POLR3AO14802 1390 aaPredicted RBP16.66■□□□□ 0.26
CTPS1-202ENST00000372621 NGEFQ8N5V2 710 aa16.66■□□□□ 0.26
CTPS1-202ENST00000372621 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
CTPS1-202ENST00000372621 NOS1P29475 1434 aa16.65■□□□□ 0.26
CTPS1-202ENST00000372621 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
CTPS1-202ENST00000372621 E9PSI1 815 aa16.64■□□□□ 0.26
CTPS1-202ENST00000372621 RTL5Q5HYW3 569 aaPredicted RBP16.64■□□□□ 0.26
CTPS1-202ENST00000372621 QRICH2Q9H0J4 1663 aa16.64■□□□□ 0.25
CTPS1-202ENST00000372621 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
CTPS1-202ENST00000372621 FRMPD1Q5SYB0 1578 aa16.63■□□□□ 0.25
CTPS1-202ENST00000372621 USP32Q8NFA0 1604 aa16.62■□□□□ 0.25
CTPS1-202ENST00000372621 CENPJQ9HC77 1338 aaPredicted RBP16.62■□□□□ 0.25
CTPS1-202ENST00000372621 NPATQ14207 1427 aa16.62■□□□□ 0.25
CTPS1-202ENST00000372621 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
CTPS1-202ENST00000372621 BCAR3O75815 825 aa16.61■□□□□ 0.25
CTPS1-202ENST00000372621 C8orf34Q49A92 452 aa16.61■□□□□ 0.25
CTPS1-202ENST00000372621 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
CTPS1-202ENST00000372621 C14orf93Q9H972 538 aaKnown RBP16.6■□□□□ 0.25
CTPS1-202ENST00000372621 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
CTPS1-202ENST00000372621 CFAP65Q6ZU64 1925 aaKnown RBP16.6■□□□□ 0.25
CTPS1-202ENST00000372621 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
CTPS1-202ENST00000372621 HECW2Q9P2P5 1572 aa16.59■□□□□ 0.25
CTPS1-202ENST00000372621 WWC1Q8IX03 1113 aa16.58■□□□□ 0.25
CTPS1-202ENST00000372621 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.25
CTPS1-202ENST00000372621 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.25
CTPS1-202ENST00000372621 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.25
CTPS1-202ENST00000372621 VIRMAQ69YN4 1812 aaKnown RBP16.58■□□□□ 0.25
CTPS1-202ENST00000372621 CFAP74Q9C0B2 1584 aa16.58■□□□□ 0.24
CTPS1-202ENST00000372621 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
CTPS1-202ENST00000372621 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
CTPS1-202ENST00000372621 NINLQ9Y2I6 1382 aa16.57■□□□□ 0.24
CTPS1-202ENST00000372621 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms