RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
PTCH2-201ENST00000372192 UHRF1BP1Q6BDS2 1440 aa14.42□□□□□ -0.1
PTCH2-201ENST00000372192 RUNDC1Q96C34 613 aa14.41□□□□□ -0.1
PTCH2-201ENST00000372192 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
PTCH2-201ENST00000372192 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
PTCH2-201ENST00000372192 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
PTCH2-201ENST00000372192 PTMSP20962 102 aa14.4□□□□□ -0.1
PTCH2-201ENST00000372192 DDX11L8A8MPP1 907 aa14.4□□□□□ -0.1
PTCH2-201ENST00000372192 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
PTCH2-201ENST00000372192 CCDC141Q6ZP82 1450 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 SRPK2P78362 688 aaKnown RBP14.39□□□□□ -0.11
PTCH2-201ENST00000372192 CHMP5Q9NZZ3 219 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 DISP3Q9P2K9 1392 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 RAPGEF6Q8TEU7 1601 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 FAM43AQ8N2R8 423 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 GRIN2AQ12879 1464 aa14.39□□□□□ -0.11
PTCH2-201ENST00000372192 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
PTCH2-201ENST00000372192 ARHGAP5Q13017 1502 aa14.38□□□□□ -0.11
PTCH2-201ENST00000372192 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
PTCH2-201ENST00000372192 PER1O15534 1290 aaPredicted RBP14.38□□□□□ -0.11
PTCH2-201ENST00000372192 CASC1Q6TDU7 716 aa14.38□□□□□ -0.11
PTCH2-201ENST00000372192 KIF14Q15058 1648 aa14.38□□□□□ -0.11
PTCH2-201ENST00000372192 POGKQ9P215 609 aa14.38□□□□□ -0.11
PTCH2-201ENST00000372192 SAFB2Q14151 953 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTCH2-201ENST00000372192 DZIP1LQ8IYY4 767 aaKnown RBP14.37□□□□□ -0.11
PTCH2-201ENST00000372192 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
PTCH2-201ENST00000372192 PRAG1Q86YV5 1406 aa14.36□□□□□ -0.11
PTCH2-201ENST00000372192 TCP11L2Q8N4U5 519 aa14.36□□□□□ -0.11
PTCH2-201ENST00000372192 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
PTCH2-201ENST00000372192 DDX19BQ9UMR2 479 aa14.35□□□□□ -0.11
PTCH2-201ENST00000372192 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
PTCH2-201ENST00000372192 DENND4BO75064 1496 aaPredicted RBP14.35□□□□□ -0.11
PTCH2-201ENST00000372192 CFAP44Q96MT7 982 aa14.35□□□□□ -0.11
PTCH2-201ENST00000372192 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
PTCH2-201ENST00000372192 NKTRP30414 1462 aaKnown RBP14.34□□□□□ -0.11
PTCH2-201ENST00000372192 GGT6Q6P531 493 aa14.34□□□□□ -0.11
PTCH2-201ENST00000372192 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
PTCH2-201ENST00000372192 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
PTCH2-201ENST00000372192 ADGRL2O95490 1459 aa14.34□□□□□ -0.11
PTCH2-201ENST00000372192 TESK2Q96S53 571 aa14.34□□□□□ -0.11
PTCH2-201ENST00000372192 MSNP26038 577 aaKnown RBP14.33□□□□□ -0.12
PTCH2-201ENST00000372192 C8orf34Q49A92 452 aa14.33□□□□□ -0.12
PTCH2-201ENST00000372192 ZNF608Q9ULD9 1512 aaPredicted RBP14.33□□□□□ -0.12
PTCH2-201ENST00000372192 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
PTCH2-201ENST00000372192 KIAA0556O60303 1618 aa14.33□□□□□ -0.12
PTCH2-201ENST00000372192 WWC1Q8IX03 1113 aa14.31□□□□□ -0.12
PTCH2-201ENST00000372192 STK26Q9P289 416 aa14.31□□□□□ -0.12
PTCH2-201ENST00000372192 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
PTCH2-201ENST00000372192 MTHFSP49914 203 aa14.3□□□□□ -0.12
PTCH2-201ENST00000372192 INSRP06213 1382 aa14.3□□□□□ -0.12
PTCH2-201ENST00000372192 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
PTCH2-201ENST00000372192 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
PTCH2-201ENST00000372192 PTMAP06454 111 aaKnown RBP14.29□□□□□ -0.12
PTCH2-201ENST00000372192 TERF2IPQ9NYB0 399 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 EVC2Q86UK5 1308 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 TRAK2O60296 914 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 MRE11P49959 708 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
PTCH2-201ENST00000372192 WDR63Q8IWG1 891 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 KDM5CP41229 1560 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 SHANK2Q9UPX8 1470 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 FOXD4L1Q9NU39 408 aa14.29□□□□□ -0.12
PTCH2-201ENST00000372192 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
PTCH2-201ENST00000372192 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
PTCH2-201ENST00000372192 IGHDP01880 384 aa14.28□□□□□ -0.12
PTCH2-201ENST00000372192 AFAP1Q8N556 730 aa14.28□□□□□ -0.12
PTCH2-201ENST00000372192 DISP1Q96F81 1524 aa14.28□□□□□ -0.12
PTCH2-201ENST00000372192 FAM135AQ9P2D6 1515 aa14.27□□□□□ -0.12
PTCH2-201ENST00000372192 COL17A1Q9UMD9 1497 aaPredicted RBP14.27□□□□□ -0.12
PTCH2-201ENST00000372192 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.12
PTCH2-201ENST00000372192 ANKRD45Q5TZF3 282 aa14.27□□□□□ -0.13
PTCH2-201ENST00000372192 NUP160Q12769 1436 aa14.26□□□□□ -0.13
PTCH2-201ENST00000372192 BLMP54132 1417 aaPredicted RBP14.26□□□□□ -0.13
PTCH2-201ENST00000372192 MCM4P33991 863 aa14.26□□□□□ -0.13
PTCH2-201ENST00000372192 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
PTCH2-201ENST00000372192 MBD5Q9P267 1494 aa14.25□□□□□ -0.13
PTCH2-201ENST00000372192 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
PTCH2-201ENST00000372192 KIF16BQ96L93 1317 aa14.25□□□□□ -0.13
PTCH2-201ENST00000372192 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
PTCH2-201ENST00000372192 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
PTCH2-201ENST00000372192 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
PTCH2-201ENST00000372192 ATP10BO94823 1461 aa14.25□□□□□ -0.13
PTCH2-201ENST00000372192 SCAF11Q99590 1463 aaKnown RBP14.24□□□□□ -0.13
PTCH2-201ENST00000372192 ZMYM4Q5VZL5 1548 aa14.24□□□□□ -0.13
PTCH2-201ENST00000372192 DDX49Q9Y6V7 483 aaKnown RBP14.24□□□□□ -0.13
PTCH2-201ENST00000372192 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
PTCH2-201ENST00000372192 RIPK4P57078 832 aa14.23□□□□□ -0.13
PTCH2-201ENST00000372192 DNTTIP2Q5QJE6 756 aaKnown RBP14.23□□□□□ -0.13
PTCH2-201ENST00000372192 CT47B1P0C2W7 299 aaPredicted RBP14.23□□□□□ -0.13
PTCH2-201ENST00000372192 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
PTCH2-201ENST00000372192 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
PTCH2-201ENST00000372192 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
PTCH2-201ENST00000372192 EXOSC9Q06265 439 aaKnown RBP14.22□□□□□ -0.13
PTCH2-201ENST00000372192 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
PTCH2-201ENST00000372192 ASXL1Q8IXJ9 1541 aa14.21□□□□□ -0.13
PTCH2-201ENST00000372192 ADGBQ8N7X0 1667 aa14.21□□□□□ -0.13
PTCH2-201ENST00000372192 APBB1O00213 710 aa14.21□□□□□ -0.14
PTCH2-201ENST00000372192 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.14
PTCH2-201ENST00000372192 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms