RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 H0YHG0 523 aa17.33■□□□□ 0.36
RAPGEF1-202ENST00000372190 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.36
RAPGEF1-202ENST00000372190 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
RAPGEF1-202ENST00000372190 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
RAPGEF1-202ENST00000372190 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
RAPGEF1-202ENST00000372190 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 CEP89Q96ST8 783 aa17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 ANKRD50Q9ULJ7 1429 aa17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 CCDC34Q96HJ3 373 aa17.31■□□□□ 0.36
RAPGEF1-202ENST00000372190 CDR1P51861 262 aa17.3■□□□□ 0.36
RAPGEF1-202ENST00000372190 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
RAPGEF1-202ENST00000372190 ACBD3Q9H3P7 528 aa17.3■□□□□ 0.36
RAPGEF1-202ENST00000372190 APBB1O00213 710 aa17.3■□□□□ 0.36
RAPGEF1-202ENST00000372190 EFCAB5A4FU69 1503 aa17.3■□□□□ 0.36
RAPGEF1-202ENST00000372190 CCDC146Q8IYE0 955 aa17.29■□□□□ 0.36
RAPGEF1-202ENST00000372190 PANK3Q9H999 370 aa17.29■□□□□ 0.36
RAPGEF1-202ENST00000372190 HDAC5Q9UQL6 1122 aa17.29■□□□□ 0.36
RAPGEF1-202ENST00000372190 KIF21BO75037 1637 aa17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 LRRC9Q6ZRR7 1453 aa17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 DDX11L8A8MPP1 907 aa17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 TTC5Q8N0Z6 440 aa17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 ARGLU1Q9NWB6 273 aaPredicted RBP17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 HECW1Q76N89 1606 aa17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
RAPGEF1-202ENST00000372190 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
RAPGEF1-202ENST00000372190 AK7Q96M32 723 aa17.27■□□□□ 0.36
RAPGEF1-202ENST00000372190 PLCD4Q9BRC7 762 aa17.27■□□□□ 0.36
RAPGEF1-202ENST00000372190 DCTN1Q14203 1278 aa17.27■□□□□ 0.35
RAPGEF1-202ENST00000372190 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
RAPGEF1-202ENST00000372190 TEFQ10587 303 aa17.26■□□□□ 0.35
RAPGEF1-202ENST00000372190 ANKLE2Q86XL3 938 aa17.25■□□□□ 0.35
RAPGEF1-202ENST00000372190 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
RAPGEF1-202ENST00000372190 SLC4A10Q6U841 1118 aa17.25■□□□□ 0.35
RAPGEF1-202ENST00000372190 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
RAPGEF1-202ENST00000372190 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
RAPGEF1-202ENST00000372190 TPM2P07951 284 aa17.24■□□□□ 0.35
RAPGEF1-202ENST00000372190 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
RAPGEF1-202ENST00000372190 TAF3Q5VWG9 929 aa17.24■□□□□ 0.35
RAPGEF1-202ENST00000372190 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
RAPGEF1-202ENST00000372190 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
RAPGEF1-202ENST00000372190 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
RAPGEF1-202ENST00000372190 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
RAPGEF1-202ENST00000372190 DYDC1Q8WWB3 177 aa17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 HSP90B2PQ58FF3 399 aa17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 NUTM2GQ5VZR2 741 aa17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 TROQ12816 1431 aaPredicted RBP17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
RAPGEF1-202ENST00000372190 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 RUFY1Q96T51 708 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 CD109Q6YHK3 1445 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 USP47Q96K76 1375 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
RAPGEF1-202ENST00000372190 ZNF592Q92610 1267 aa17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 RAPGEF4Q8WZA2 1011 aa17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 MIA2Q96PC5 1412 aa17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 USP8P40818 1118 aa17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
RAPGEF1-202ENST00000372190 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
RAPGEF1-202ENST00000372190 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
RAPGEF1-202ENST00000372190 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
RAPGEF1-202ENST00000372190 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
RAPGEF1-202ENST00000372190 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
RAPGEF1-202ENST00000372190 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
RAPGEF1-202ENST00000372190 NEXNQ0ZGT2 675 aa17.18■□□□□ 0.34
RAPGEF1-202ENST00000372190 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
RAPGEF1-202ENST00000372190 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
RAPGEF1-202ENST00000372190 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 KIF3AQ9Y496 699 aa17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
RAPGEF1-202ENST00000372190 NLRP6P59044 892 aa17.16■□□□□ 0.34
RAPGEF1-202ENST00000372190 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
RAPGEF1-202ENST00000372190 LEKR1Q6ZMV7 388 aa17.16■□□□□ 0.34
RAPGEF1-202ENST00000372190 SF3B2Q13435 895 aaKnown RBP17.15■□□□□ 0.34
RAPGEF1-202ENST00000372190 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
RAPGEF1-202ENST00000372190 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
RAPGEF1-202ENST00000372190 ZRSR2Q15696 482 aaKnown RBP17.14■□□□□ 0.33
RAPGEF1-202ENST00000372190 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
RAPGEF1-202ENST00000372190 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
RAPGEF1-202ENST00000372190 CUL7Q14999 1698 aa17.14■□□□□ 0.33
RAPGEF1-202ENST00000372190 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
RAPGEF1-202ENST00000372190 TPM1P09493 284 aa17.13■□□□□ 0.33
RAPGEF1-202ENST00000372190 SLC52A1Q9NWF4 448 aa17.13■□□□□ 0.33
RAPGEF1-202ENST00000372190 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
RAPGEF1-202ENST00000372190 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms