RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 NOS1P29475 1434 aa15.58■□□□□ 0.08
PDE6C-201ENST00000371447 AMER1Q5JTC6 1135 aaPredicted RBP15.58■□□□□ 0.08
PDE6C-201ENST00000371447 RRP1P56182 461 aaKnown RBP15.57■□□□□ 0.08
PDE6C-201ENST00000371447 FBXO31Q5XUX0 539 aaPredicted RBP15.57■□□□□ 0.08
PDE6C-201ENST00000371447 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
PDE6C-201ENST00000371447 RRP7AQ9Y3A4 280 aaKnown RBP15.57■□□□□ 0.08
PDE6C-201ENST00000371447 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
PDE6C-201ENST00000371447 CARD14Q9BXL6 1004 aa15.56■□□□□ 0.08
PDE6C-201ENST00000371447 APAF1O14727 1248 aa15.56■□□□□ 0.08
PDE6C-201ENST00000371447 E9PCH4 1651 aa15.56■□□□□ 0.08
PDE6C-201ENST00000371447 LRPPRCP42704 1394 aaKnown RBP15.56■□□□□ 0.08
PDE6C-201ENST00000371447 CABP2Q9NPB3 220 aa15.55■□□□□ 0.08
PDE6C-201ENST00000371447 CENPJQ9HC77 1338 aaPredicted RBP15.55■□□□□ 0.08
PDE6C-201ENST00000371447 IDI1Q13907 227 aa15.54■□□□□ 0.08
PDE6C-201ENST00000371447 SCAF11Q99590 1463 aaKnown RBP15.54■□□□□ 0.08
PDE6C-201ENST00000371447 MSH5O43196 834 aa15.53■□□□□ 0.08
PDE6C-201ENST00000371447 EIF3AQ14152 1382 aaKnown RBP15.53■□□□□ 0.08
PDE6C-201ENST00000371447 CLTCL1P53675 1640 aa15.53■□□□□ 0.08
PDE6C-201ENST00000371447 C20orf194Q5TEA3 1177 aa15.53■□□□□ 0.08
PDE6C-201ENST00000371447 MORC1Q86VD1 984 aa15.53■□□□□ 0.08
PDE6C-201ENST00000371447 POLR1AO95602 1720 aaPredicted RBP15.52■□□□□ 0.08
PDE6C-201ENST00000371447 SRPK2P78362 688 aaKnown RBP15.52■□□□□ 0.08
PDE6C-201ENST00000371447 ERICH6BQ5W0A0 696 aa15.52■□□□□ 0.08
PDE6C-201ENST00000371447 PRDM15P57071 1507 aaPredicted RBP15.52■□□□□ 0.07
PDE6C-201ENST00000371447 ZNF518AQ6AHZ1 1483 aa15.51■□□□□ 0.07
PDE6C-201ENST00000371447 MINK1Q8N4C8 1332 aaPredicted RBP15.51■□□□□ 0.07
PDE6C-201ENST00000371447 PTPRTO14522 1441 aa15.5■□□□□ 0.07
PDE6C-201ENST00000371447 CRBNQ96SW2 442 aa15.5■□□□□ 0.07
PDE6C-201ENST00000371447 ANP32EQ9BTT0 268 aa15.5■□□□□ 0.07
PDE6C-201ENST00000371447 NPATQ14207 1427 aa15.49■□□□□ 0.07
PDE6C-201ENST00000371447 TRPM2O94759 1503 aa15.48■□□□□ 0.07
PDE6C-201ENST00000371447 POGKQ9P215 609 aa15.48■□□□□ 0.07
PDE6C-201ENST00000371447 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
PDE6C-201ENST00000371447 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
PDE6C-201ENST00000371447 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
PDE6C-201ENST00000371447 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
PDE6C-201ENST00000371447 YEATS2Q9ULM3 1422 aa15.46■□□□□ 0.07
PDE6C-201ENST00000371447 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.06
PDE6C-201ENST00000371447 ABCA9Q8IUA7 1624 aa15.46■□□□□ 0.06
PDE6C-201ENST00000371447 EIF2AK4Q9P2K8 1649 aaKnown RBP15.46■□□□□ 0.06
PDE6C-201ENST00000371447 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
PDE6C-201ENST00000371447 POGZQ7Z3K3 1410 aa15.45■□□□□ 0.06
PDE6C-201ENST00000371447 PDE3BQ13370 1112 aa15.45■□□□□ 0.06
PDE6C-201ENST00000371447 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
PDE6C-201ENST00000371447 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
PDE6C-201ENST00000371447 MADDQ8WXG6 1647 aa15.44■□□□□ 0.06
PDE6C-201ENST00000371447 MTHFSP49914 203 aa15.44■□□□□ 0.06
PDE6C-201ENST00000371447 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
PDE6C-201ENST00000371447 U2SURPO15042 1029 aaKnown RBP15.43■□□□□ 0.06
PDE6C-201ENST00000371447 FBLN1P23142 703 aa15.43■□□□□ 0.06
PDE6C-201ENST00000371447 BCL2L13Q9BXK5 485 aa15.43■□□□□ 0.06
PDE6C-201ENST00000371447 FRAT1Q92837 279 aaPredicted RBP15.43■□□□□ 0.06
PDE6C-201ENST00000371447 SPHKAPQ2M3C7 1700 aa15.43■□□□□ 0.06
PDE6C-201ENST00000371447 BCAR3O75815 825 aa15.43■□□□□ 0.06
PDE6C-201ENST00000371447 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
PDE6C-201ENST00000371447 PRAM1Q96QH2 718 aa15.42■□□□□ 0.06
PDE6C-201ENST00000371447 NSD3Q9BZ95 1437 aa15.42■□□□□ 0.06
PDE6C-201ENST00000371447 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
PDE6C-201ENST00000371447 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
PDE6C-201ENST00000371447 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
PDE6C-201ENST00000371447 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
PDE6C-201ENST00000371447 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDE6C-201ENST00000371447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDE6C-201ENST00000371447 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
PDE6C-201ENST00000371447 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
PDE6C-201ENST00000371447 TET3O43151 1660 aa15.4■□□□□ 0.06
PDE6C-201ENST00000371447 NBR1Q14596 966 aa15.4■□□□□ 0.06
PDE6C-201ENST00000371447 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
PDE6C-201ENST00000371447 ARAP3Q8WWN8 1544 aa15.4■□□□□ 0.06
PDE6C-201ENST00000371447 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
PDE6C-201ENST00000371447 WAPLQ7Z5K2 1190 aa15.39■□□□□ 0.05
PDE6C-201ENST00000371447 CEP152O94986 1710 aa15.38■□□□□ 0.05
PDE6C-201ENST00000371447 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
PDE6C-201ENST00000371447 RGS3P49796 1198 aa15.38■□□□□ 0.05
PDE6C-201ENST00000371447 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
PDE6C-201ENST00000371447 EFCAB6Q5THR3 1501 aa15.37■□□□□ 0.05
PDE6C-201ENST00000371447 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
PDE6C-201ENST00000371447 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
PDE6C-201ENST00000371447 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
PDE6C-201ENST00000371447 RNF17Q9BXT8 1623 aaKnown RBP15.35■□□□□ 0.05
PDE6C-201ENST00000371447 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
PDE6C-201ENST00000371447 TCP11L2Q8N4U5 519 aa15.35■□□□□ 0.05
PDE6C-201ENST00000371447 CGNL1Q0VF96 1302 aa15.35■□□□□ 0.05
PDE6C-201ENST00000371447 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
PDE6C-201ENST00000371447 SLFN5Q08AF3 891 aa15.34■□□□□ 0.05
PDE6C-201ENST00000371447 ABCA6Q8N139 1617 aa15.34■□□□□ 0.05
PDE6C-201ENST00000371447 CABP1Q9NZU7 370 aa15.33■□□□□ 0.05
PDE6C-201ENST00000371447 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.04
PDE6C-201ENST00000371447 SOX12O15370 315 aa15.33■□□□□ 0.04
PDE6C-201ENST00000371447 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
PDE6C-201ENST00000371447 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
PDE6C-201ENST00000371447 PANK1Q8TE04 598 aa15.32■□□□□ 0.04
PDE6C-201ENST00000371447 DEPDC5O75140 1603 aa15.32■□□□□ 0.04
PDE6C-201ENST00000371447 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
PDE6C-201ENST00000371447 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
PDE6C-201ENST00000371447 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
PDE6C-201ENST00000371447 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
PDE6C-201ENST00000371447 VWDEQ8N2E2 1590 aa15.31■□□□□ 0.04
PDE6C-201ENST00000371447 MROH2AA6NES4 1674 aa15.31■□□□□ 0.04
PDE6C-201ENST00000371447 WWC1Q8IX03 1113 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms