RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.51□□□□□ -0.894e-7■■□□□ 13
ABCD3-202ENST00000370214 FOXD4L1Q9NU39 408 aa9.51□□□□□ -0.89
ABCD3-202ENST00000370214 PRAG1Q86YV5 1406 aa9.51□□□□□ -0.89
ABCD3-202ENST00000370214 NFKBIBQ15653 356 aa9.51□□□□□ -0.89
ABCD3-202ENST00000370214 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
ABCD3-202ENST00000370214 LRPPRCP42704 1394 aaKnown RBP9.51□□□□□ -0.89
ABCD3-202ENST00000370214 PDE3BQ13370 1112 aa9.5□□□□□ -0.89
ABCD3-202ENST00000370214 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
ABCD3-202ENST00000370214 TRAPPC8Q9Y2L5 1435 aa9.5□□□□□ -0.89
ABCD3-202ENST00000370214 PLA2R1Q13018 1463 aa9.5□□□□□ -0.89
ABCD3-202ENST00000370214 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
ABCD3-202ENST00000370214 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
ABCD3-202ENST00000370214 TCP11L2Q8N4U5 519 aa9.5□□□□□ -0.89
ABCD3-202ENST00000370214 A2MP01023 1474 aa9.5□□□□□ -0.89
ABCD3-202ENST00000370214 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
ABCD3-202ENST00000370214 RALGAPBQ86X10 1494 aa9.49□□□□□ -0.89
ABCD3-202ENST00000370214 APBB1O00213 710 aa9.49□□□□□ -0.89
ABCD3-202ENST00000370214 STAG3Q9UJ98 1225 aa9.49□□□□□ -0.89
ABCD3-202ENST00000370214 ADCY10Q96PN6 1610 aa9.49□□□□□ -0.89
ABCD3-202ENST00000370214 FAM135AQ9P2D6 1515 aa9.49□□□□□ -0.89
ABCD3-202ENST00000370214 RLBP1P12271 317 aa9.48□□□□□ -0.89
ABCD3-202ENST00000370214 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
ABCD3-202ENST00000370214 POLR1AO95602 1720 aaPredicted RBP9.48□□□□□ -0.89
ABCD3-202ENST00000370214 ARID4BQ4LE39 1312 aaPredicted RBP9.48□□□□□ -0.89
ABCD3-202ENST00000370214 KDM5CP41229 1560 aa9.48□□□□□ -0.89
ABCD3-202ENST00000370214 CENPJQ9HC77 1338 aaPredicted RBP9.48□□□□□ -0.89
ABCD3-202ENST00000370214 THUMPD2Q9BTF0 503 aaKnown RBP9.48□□□□□ -0.89
ABCD3-202ENST00000370214 CCDC141Q6ZP82 1450 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 MBD5Q9P267 1494 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
ABCD3-202ENST00000370214 MAGI2Q86UL8 1455 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 WASHC2CQ9Y4E1 1318 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 ERCC6L2Q5T890 1561 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 MFAP1P55081 439 aaKnown RBP9.47□□□□□ -0.89
ABCD3-202ENST00000370214 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
ABCD3-202ENST00000370214 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
ABCD3-202ENST00000370214 HMOX1P09601 288 aa9.46□□□□□ -0.9
ABCD3-202ENST00000370214 RSPH4AQ5TD94 716 aa9.46□□□□□ -0.9
ABCD3-202ENST00000370214 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
ABCD3-202ENST00000370214 C1orf115Q9H7X2 142 aa9.46□□□□□ -0.9
ABCD3-202ENST00000370214 CFAP65Q6ZU64 1925 aaKnown RBP9.46□□□□□ -0.9
ABCD3-202ENST00000370214 C8orf34Q49A92 452 aa9.45□□□□□ -0.9
ABCD3-202ENST00000370214 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
ABCD3-202ENST00000370214 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
ABCD3-202ENST00000370214 CENPQQ7L2Z9 268 aaPredicted RBP9.45□□□□□ -0.9
ABCD3-202ENST00000370214 POGKQ9P215 609 aa9.45□□□□□ -0.9
ABCD3-202ENST00000370214 PCDHB15Q9Y5E8 787 aa9.45□□□□□ -0.9
ABCD3-202ENST00000370214 ABCC10Q5T3U5 1492 aa9.44□□□□□ -0.9
ABCD3-202ENST00000370214 SMC4Q9NTJ3 1288 aa9.44□□□□□ -0.9
ABCD3-202ENST00000370214 ARHGEF12Q9NZN5 1544 aa9.43□□□□□ -0.9
ABCD3-202ENST00000370214 UGGT1Q9NYU2 1555 aa9.43□□□□□ -0.9
ABCD3-202ENST00000370214 CROCC2H7BZ55 1655 aa9.43□□□□□ -0.9
ABCD3-202ENST00000370214 UHRF1BP1Q6BDS2 1440 aa9.43□□□□□ -0.9
ABCD3-202ENST00000370214 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
ABCD3-202ENST00000370214 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
ABCD3-202ENST00000370214 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
ABCD3-202ENST00000370214 E9PSI1 815 aa9.42□□□□□ -0.9
ABCD3-202ENST00000370214 GSE1Q14687 1217 aa9.42□□□□□ -0.9
ABCD3-202ENST00000370214 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
ABCD3-202ENST00000370214 ADGBQ8N7X0 1667 aa9.41□□□□□ -0.9
ABCD3-202ENST00000370214 MS4A1P11836 297 aa9.41□□□□□ -0.9
ABCD3-202ENST00000370214 FBXO31Q5XUX0 539 aaPredicted RBP9.41□□□□□ -0.9
ABCD3-202ENST00000370214 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
ABCD3-202ENST00000370214 ADGRL2O95490 1459 aa9.4□□□□□ -0.9
ABCD3-202ENST00000370214 LNPKQ9C0E8 428 aa9.4□□□□□ -0.9
ABCD3-202ENST00000370214 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.9
ABCD3-202ENST00000370214 KANK1Q14678 1352 aa9.4□□□□□ -0.9
ABCD3-202ENST00000370214 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.91
ABCD3-202ENST00000370214 NUP160Q12769 1436 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 DCTN1Q14203 1278 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
ABCD3-202ENST00000370214 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
ABCD3-202ENST00000370214 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
ABCD3-202ENST00000370214 MAPK8IP3Q9UPT6 1336 aa9.38□□□□□ -0.91
ABCD3-202ENST00000370214 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
ABCD3-202ENST00000370214 RIPK4P57078 832 aa9.38□□□□□ -0.91
ABCD3-202ENST00000370214 CDC42BPAQ5VT25 1732 aa9.38□□□□□ -0.91
ABCD3-202ENST00000370214 PRAM1Q96QH2 718 aa9.38□□□□□ -0.91
ABCD3-202ENST00000370214 NOS1P29475 1434 aa9.37□□□□□ -0.91
ABCD3-202ENST00000370214 RUNDC1Q96C34 613 aa9.37□□□□□ -0.91
ABCD3-202ENST00000370214 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
ABCD3-202ENST00000370214 CABP1Q9NZU7 370 aa9.37□□□□□ -0.91
ABCD3-202ENST00000370214 NOB1Q9ULX3 412 aaKnown RBP9.37□□□□□ -0.91
ABCD3-202ENST00000370214 TTC37Q6PGP7 1564 aa9.37□□□□□ -0.91
ABCD3-202ENST00000370214 KDM5DQ9BY66 1539 aa9.37□□□□□ -0.91
ABCD3-202ENST00000370214 HSP90AA1P07900 732 aaKnown RBP9.36□□□□□ -0.91
ABCD3-202ENST00000370214 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
ABCD3-202ENST00000370214 IDI1Q13907 227 aa9.36□□□□□ -0.91
ABCD3-202ENST00000370214 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
ABCD3-202ENST00000370214 FOXD4L4Q8WXT5 416 aaPredicted RBP9.36□□□□□ -0.91
ABCD3-202ENST00000370214 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
ABCD3-202ENST00000370214 WDR7Q9Y4E6 1490 aa9.35□□□□□ -0.91
ABCD3-202ENST00000370214 FAM83GA6ND36 823 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms