RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
CHTOP-201ENST00000368686 BCAR3O75815 825 aa22.73■■□□□ 1.23
CHTOP-201ENST00000368686 GPRASP1Q5JY77 1395 aa22.73■■□□□ 1.23
CHTOP-201ENST00000368686 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
CHTOP-201ENST00000368686 SPRYD3Q8NCJ5 442 aa22.71■■□□□ 1.23
CHTOP-201ENST00000368686 AAMPQ13685 434 aa22.71■■□□□ 1.23
CHTOP-201ENST00000368686 PMFBP1Q8TBY8 1022 aa22.71■■□□□ 1.23
CHTOP-201ENST00000368686 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
CHTOP-201ENST00000368686 NUP155O75694 1391 aa22.7■■□□□ 1.22
CHTOP-201ENST00000368686 OFD1O75665 1012 aa22.7■■□□□ 1.22
CHTOP-201ENST00000368686 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.7■■□□□ 1.22
CHTOP-201ENST00000368686 PRDM15P57071 1507 aaPredicted RBP22.7■■□□□ 1.22
CHTOP-201ENST00000368686 PLXNC1O60486 1568 aa22.69■■□□□ 1.22
CHTOP-201ENST00000368686 CCDC173Q0VFZ6 552 aa22.69■■□□□ 1.22
CHTOP-201ENST00000368686 ERBINQ96RT1 1412 aa22.69■■□□□ 1.22
CHTOP-201ENST00000368686 E9PSI1 815 aa22.68■■□□□ 1.22
CHTOP-201ENST00000368686 PPP2R1AP30153 589 aa22.68■■□□□ 1.22
CHTOP-201ENST00000368686 RBM10P98175 930 aaKnown RBP22.68■■□□□ 1.22
CHTOP-201ENST00000368686 TESK2Q96S53 571 aa22.68■■□□□ 1.22
CHTOP-201ENST00000368686 ZSCAN30Q86W11 494 aa22.67■■□□□ 1.22
CHTOP-201ENST00000368686 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
CHTOP-201ENST00000368686 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
CHTOP-201ENST00000368686 PTMSP20962 102 aa22.66■■□□□ 1.22
CHTOP-201ENST00000368686 SKOR2Q2VWA4 1001 aaPredicted RBP22.66■■□□□ 1.22
CHTOP-201ENST00000368686 RTEL1-TNFRSF6BF6WH68 1400 aa22.66■■□□□ 1.22
CHTOP-201ENST00000368686 SCAPERQ9BY12 1400 aa22.66■■□□□ 1.22
CHTOP-201ENST00000368686 PPP1R9BQ96SB3 815 aa22.65■■□□□ 1.22
CHTOP-201ENST00000368686 TMF1P82094 1093 aa22.65■■□□□ 1.22
CHTOP-201ENST00000368686 ZNF692Q9BU19 519 aaPredicted RBP22.65■■□□□ 1.22
CHTOP-201ENST00000368686 NCOA3Q9Y6Q9 1424 aa22.64■■□□□ 1.21
CHTOP-201ENST00000368686 GAS2L3Q86XJ1 694 aa22.64■■□□□ 1.21
CHTOP-201ENST00000368686 C22orf23Q9BZE7 217 aa22.64■■□□□ 1.21
CHTOP-201ENST00000368686 CANXP27824 592 aaKnown RBP22.63■■□□□ 1.21
CHTOP-201ENST00000368686 RIPK4P57078 832 aa22.63■■□□□ 1.21
CHTOP-201ENST00000368686 HSCBQ8IWL3 235 aa22.63■■□□□ 1.21
CHTOP-201ENST00000368686 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
CHTOP-201ENST00000368686 COG6Q9Y2V7 657 aa22.63■■□□□ 1.21
CHTOP-201ENST00000368686 PIK3C2GO75747 1445 aa22.63■■□□□ 1.21
CHTOP-201ENST00000368686 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
CHTOP-201ENST00000368686 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
CHTOP-201ENST00000368686 SMAP1Q8IYB5 467 aaPredicted RBP22.61■■□□□ 1.21
CHTOP-201ENST00000368686 GBP4Q96PP9 640 aa22.61■■□□□ 1.21
CHTOP-201ENST00000368686 MSNP26038 577 aaKnown RBP22.61■■□□□ 1.21
CHTOP-201ENST00000368686 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
CHTOP-201ENST00000368686 PTPRGP23470 1445 aa22.61■■□□□ 1.21
CHTOP-201ENST00000368686 DDIT3P35638 169 aa22.6■■□□□ 1.21
CHTOP-201ENST00000368686 MTERF4Q7Z6M4 381 aaKnown RBP22.6■■□□□ 1.21
CHTOP-201ENST00000368686 PANK1Q8TE04 598 aa22.6■■□□□ 1.21
CHTOP-201ENST00000368686 ANP32BQ92688 251 aaKnown RBP22.6■■□□□ 1.21
CHTOP-201ENST00000368686 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
CHTOP-201ENST00000368686 CIZ1Q9ULV3 898 aaPredicted RBP22.59■■□□□ 1.21
CHTOP-201ENST00000368686 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
CHTOP-201ENST00000368686 EIF2AK4Q9P2K8 1649 aaKnown RBP22.59■■□□□ 1.21
CHTOP-201ENST00000368686 KNSTRNQ9Y448 316 aa22.59■■□□□ 1.21
CHTOP-201ENST00000368686 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.2
CHTOP-201ENST00000368686 SHANK2Q9UPX8 1470 aa22.58■■□□□ 1.2
CHTOP-201ENST00000368686 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
CHTOP-201ENST00000368686 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
CHTOP-201ENST00000368686 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
CHTOP-201ENST00000368686 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
CHTOP-201ENST00000368686 MAGI2Q86UL8 1455 aa22.56■■□□□ 1.2
CHTOP-201ENST00000368686 TROQ12816 1431 aaPredicted RBP22.56■■□□□ 1.2
CHTOP-201ENST00000368686 APAF1O14727 1248 aa22.55■■□□□ 1.2
CHTOP-201ENST00000368686 NASPP49321 788 aaPredicted RBP22.55■■□□□ 1.2
CHTOP-201ENST00000368686 TNPO1Q92973 898 aaKnown RBP22.55■■□□□ 1.2
CHTOP-201ENST00000368686 RWDD1Q9H446 243 aaPredicted RBP22.55■■□□□ 1.2
CHTOP-201ENST00000368686 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
CHTOP-201ENST00000368686 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
CHTOP-201ENST00000368686 HS1BP3Q53T59 392 aa22.54■■□□□ 1.2
CHTOP-201ENST00000368686 FAM13BQ9NYF5 915 aa22.54■■□□□ 1.2
CHTOP-201ENST00000368686 RAPGEF6Q8TEU7 1601 aa22.54■■□□□ 1.2
CHTOP-201ENST00000368686 PCDHB15Q9Y5E8 787 aa22.54■■□□□ 1.2
CHTOP-201ENST00000368686 IBTKQ9P2D0 1353 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-201ENST00000368686 A0A0U1RQG5 324 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-201ENST00000368686 MFAP1P55081 439 aaKnown RBP22.53■■□□□ 1.2
CHTOP-201ENST00000368686 AMER1Q5JTC6 1135 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-201ENST00000368686 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
CHTOP-201ENST00000368686 ADCY10Q96PN6 1610 aa22.52■■□□□ 1.2
CHTOP-201ENST00000368686 SNX21Q969T3 373 aa22.52■■□□□ 1.2
CHTOP-201ENST00000368686 ASXL1Q8IXJ9 1541 aa22.51■■□□□ 1.19
CHTOP-201ENST00000368686 FAM135AQ9P2D6 1515 aa22.51■■□□□ 1.19
CHTOP-201ENST00000368686 KIAA0556O60303 1618 aa22.51■■□□□ 1.19
CHTOP-201ENST00000368686 RAB3GAP1Q15042 981 aa22.51■■□□□ 1.19
CHTOP-201ENST00000368686 SYNMO15061 1565 aa22.5■■□□□ 1.19
CHTOP-201ENST00000368686 NUP160Q12769 1436 aa22.5■■□□□ 1.19
CHTOP-201ENST00000368686 A2MP01023 1474 aa22.5■■□□□ 1.19
CHTOP-201ENST00000368686 R3HCC1Q9Y3T6 440 aaKnown RBP22.5■■□□□ 1.19
CHTOP-201ENST00000368686 C9orf84Q5VXU9 1444 aa22.49■■□□□ 1.19
CHTOP-201ENST00000368686 NPC1L1Q9UHC9 1359 aa22.49■■□□□ 1.19
CHTOP-201ENST00000368686 ZNF777Q9ULD5 760 aaPredicted RBP22.48■■□□□ 1.19
CHTOP-201ENST00000368686 ZNF500O60304 480 aaPredicted RBP22.48■■□□□ 1.19
CHTOP-201ENST00000368686 CDC42BPAQ5VT25 1732 aa22.47■■□□□ 1.19
CHTOP-201ENST00000368686 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
CHTOP-201ENST00000368686 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
CHTOP-201ENST00000368686 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
CHTOP-201ENST00000368686 DYNC1I1O14576 645 aa22.47■■□□□ 1.19
CHTOP-201ENST00000368686 UQCRHLA0A096LP55 91 aa22.46■■□□□ 1.19
CHTOP-201ENST00000368686 UQCRHP07919 91 aa22.46■■□□□ 1.19
CHTOP-201ENST00000368686 MYO5CQ9NQX4 1742 aa22.46■■□□□ 1.19
CHTOP-201ENST00000368686 DISP1Q96F81 1524 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms