RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 FAM184AQ8NB25 1140 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 NCOA2Q15596 1464 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 NGDNQ8NEJ9 315 aaKnown RBP10.12□□□□□ -0.79
SHPRH-203ENST00000367505 ANKRD50Q9ULJ7 1429 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 EID1Q9Y6B2 187 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 PDE3AQ14432 1141 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 TAF7LQ5H9L4 462 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 PTPRGP23470 1445 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
SHPRH-203ENST00000367505 GPS2Q13227 327 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.12□□□□□ -0.795e-7■■□□□ 12
SHPRH-203ENST00000367505 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 DIAPH3Q9NSV4 1193 aa10.12□□□□□ -0.79
SHPRH-203ENST00000367505 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
SHPRH-203ENST00000367505 GNAI1P63096 354 aa10.11□□□□□ -0.79
SHPRH-203ENST00000367505 NOC3LQ8WTT2 800 aaKnown RBP10.1□□□□□ -0.79
SHPRH-203ENST00000367505 RIPK4P57078 832 aa10.1□□□□□ -0.79
SHPRH-203ENST00000367505 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-203ENST00000367505 CPLX2Q6PUV4 134 aaKnown RBP10.1□□□□□ -0.79
SHPRH-203ENST00000367505 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
SHPRH-203ENST00000367505 SMG6Q86US8 1419 aaKnown RBP10.1□□□□□ -0.79
SHPRH-203ENST00000367505 CSB-PGBD3P0DP91 1061 aa10.1□□□□□ -0.79
SHPRH-203ENST00000367505 EFCAB5A4FU69 1503 aa10.1□□□□□ -0.79
SHPRH-203ENST00000367505 RNF20Q5VTR2 975 aa10.1□□□□□ -0.79
SHPRH-203ENST00000367505 CHMP3Q9Y3E7 222 aa10.1□□□□□ -0.79
SHPRH-203ENST00000367505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.09□□□□□ -0.79
SHPRH-203ENST00000367505 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
SHPRH-203ENST00000367505 ARAP1Q96P48 1450 aa10.09□□□□□ -0.79
SHPRH-203ENST00000367505 ELL2O00472 640 aaPredicted RBP10.09□□□□□ -0.79
SHPRH-203ENST00000367505 TPM1P09493 284 aa10.09□□□□□ -0.79
SHPRH-203ENST00000367505 HSP90AB4PQ58FF6 505 aa10.09□□□□□ -0.79
SHPRH-203ENST00000367505 BACH2Q9BYV9 841 aa10.08□□□□□ -0.8
SHPRH-203ENST00000367505 HFM1A2PYH4 1435 aa10.08□□□□□ -0.8
SHPRH-203ENST00000367505 CDC45O75419 566 aa10.08□□□□□ -0.8
SHPRH-203ENST00000367505 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
SHPRH-203ENST00000367505 MBD3O95983 291 aa10.08□□□□□ -0.8
SHPRH-203ENST00000367505 MCM2P49736 904 aa10.07□□□□□ -0.8
SHPRH-203ENST00000367505 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-203ENST00000367505 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
SHPRH-203ENST00000367505 ADAMTS8Q9UP79 889 aa10.07□□□□□ -0.8
SHPRH-203ENST00000367505 TRAK2O60296 914 aa10.07□□□□□ -0.8
SHPRH-203ENST00000367505 RASSF8Q8NHQ8 419 aa10.07□□□□□ -0.8
SHPRH-203ENST00000367505 CT47B1P0C2W7 299 aaPredicted RBP10.07□□□□□ -0.8
SHPRH-203ENST00000367505 LNPKQ9C0E8 428 aa10.07□□□□□ -0.8
SHPRH-203ENST00000367505 TPM2P07951 284 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 NEXNQ0ZGT2 675 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 PNISRQ8TF01 805 aaKnown RBP10.06□□□□□ -0.8
SHPRH-203ENST00000367505 CCDC70Q6NSX1 233 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 SMC3Q9UQE7 1217 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 LETM1O95202 739 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-203ENST00000367505 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 TEX35Q5T0J7 233 aa10.06□□□□□ -0.8
SHPRH-203ENST00000367505 PRXQ9BXM0 1461 aa10.05□□□□□ -0.8
SHPRH-203ENST00000367505 TEFQ10587 303 aa10.05□□□□□ -0.8
SHPRH-203ENST00000367505 HOOK1Q9UJC3 728 aaKnown RBP10.05□□□□□ -0.8
SHPRH-203ENST00000367505 EHBP1L1Q8N3D4 1523 aa10.05□□□□□ -0.8
SHPRH-203ENST00000367505 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
SHPRH-203ENST00000367505 ERC2O15083 957 aa10.05□□□□□ -0.8
SHPRH-203ENST00000367505 MCTP1Q6DN14 999 aa10.05□□□□□ -0.8
SHPRH-203ENST00000367505 A0A0U1RQG5 324 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-203ENST00000367505 TPD52L1Q16890 204 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 C9orf78Q9NZ63 289 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 IFIT2P09913 472 aaKnown RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 KIAA1107Q9UPP5 1409 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 RABEP1Q15276 862 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 C1orf141Q5JVX7 400 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 DDX58O95786 925 aaKnown RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 SASS6Q6UVJ0 657 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-203ENST00000367505 TIAM1Q13009 1591 aa10.04□□□□□ -0.8
SHPRH-203ENST00000367505 ZNF771Q7L3S4 317 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
SHPRH-203ENST00000367505 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 HMGN5P82970 282 aaKnown RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 AKAP17AQ02040 695 aaKnown RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 CCDC173Q0VFZ6 552 aa10.03□□□□□ -0.8
SHPRH-203ENST00000367505 SETQ01105 290 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
SHPRH-203ENST00000367505 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 IPO7O95373 1038 aaKnown RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 FOXD4L6Q3SYB3 417 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 FOXD4L3Q6VB84 417 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 ARGLU1Q9NWB6 273 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-203ENST00000367505 ZNF644Q9H582 1327 aaPredicted RBP10.02□□□□□ -0.8
SHPRH-203ENST00000367505 TRIM29Q14134 588 aa10.02□□□□□ -0.8
SHPRH-203ENST00000367505 TCP11L2Q8N4U5 519 aa10.02□□□□□ -0.8
SHPRH-203ENST00000367505 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.8
SHPRH-203ENST00000367505 AKNAQ7Z591 1439 aa10.02□□□□□ -0.8
SHPRH-203ENST00000367505 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
SHPRH-203ENST00000367505 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
SHPRH-203ENST00000367505 SYNJ1O43426 1573 aa10.02□□□□□ -0.81
SHPRH-203ENST00000367505 FKBP5Q13451 457 aaPredicted RBP10.02□□□□□ -0.81
SHPRH-203ENST00000367505 CCDC73Q6ZRK6 1079 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms