RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MAPKBP1O60336 1514 aa14.62□□□□□ -0.07
CDC42BPA-202ENST00000366764 HSP90AA2PQ14568 343 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPA-202ENST00000366764 RPRD2Q5VT52 1461 aaKnown RBP14.61□□□□□ -0.07
CDC42BPA-202ENST00000366764 APAF1O14727 1248 aa14.61□□□□□ -0.07
CDC42BPA-202ENST00000366764 DRC7Q8IY82 874 aa14.61□□□□□ -0.07
CDC42BPA-202ENST00000366764 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
CDC42BPA-202ENST00000366764 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
CDC42BPA-202ENST00000366764 BACH2Q9BYV9 841 aa14.6□□□□□ -0.07
CDC42BPA-202ENST00000366764 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
CDC42BPA-202ENST00000366764 KIF3AQ9Y496 699 aa14.59□□□□□ -0.07
CDC42BPA-202ENST00000366764 SAFB2Q14151 953 aaKnown RBP eCLIP14.59□□□□□ -0.075e-6■■■□□ 16.3
CDC42BPA-202ENST00000366764 KIAA0586Q9BVV6 1533 aa14.59□□□□□ -0.07
CDC42BPA-202ENST00000366764 ZNF644Q9H582 1327 aaPredicted RBP14.59□□□□□ -0.07
CDC42BPA-202ENST00000366764 COG6Q9Y2V7 657 aa14.59□□□□□ -0.07
CDC42BPA-202ENST00000366764 STK26Q9P289 416 aa14.59□□□□□ -0.07
CDC42BPA-202ENST00000366764 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
CDC42BPA-202ENST00000366764 ERBINQ96RT1 1412 aa14.57□□□□□ -0.08
CDC42BPA-202ENST00000366764 NUCB2P80303 420 aa14.57□□□□□ -0.08
CDC42BPA-202ENST00000366764 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
CDC42BPA-202ENST00000366764 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
CDC42BPA-202ENST00000366764 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
CDC42BPA-202ENST00000366764 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.55□□□□□ -0.08
CDC42BPA-202ENST00000366764 MRE11P49959 708 aa14.55□□□□□ -0.08
CDC42BPA-202ENST00000366764 C22orf23Q9BZE7 217 aa14.55□□□□□ -0.08
CDC42BPA-202ENST00000366764 TPM4P67936 248 aa14.54□□□□□ -0.08
CDC42BPA-202ENST00000366764 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
CDC42BPA-202ENST00000366764 CDK13Q14004 1512 aaKnown RBP14.53□□□□□ -0.08
CDC42BPA-202ENST00000366764 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
CDC42BPA-202ENST00000366764 MTERF4Q7Z6M4 381 aaKnown RBP14.53□□□□□ -0.08
CDC42BPA-202ENST00000366764 TRIM6-TRIM34B2RNG4 842 aa14.53□□□□□ -0.08
CDC42BPA-202ENST00000366764 ADAMTS8Q9UP79 889 aa14.52□□□□□ -0.08
CDC42BPA-202ENST00000366764 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.08
CDC42BPA-202ENST00000366764 ANKRD45Q5TZF3 282 aa14.52□□□□□ -0.08
CDC42BPA-202ENST00000366764 RRP7AQ9Y3A4 280 aaKnown RBP14.52□□□□□ -0.08
CDC42BPA-202ENST00000366764 ZBTB7CA1YPR0 619 aa14.52□□□□□ -0.08
CDC42BPA-202ENST00000366764 NBPF8Q3BBV2 869 aa14.52□□□□□ -0.08
CDC42BPA-202ENST00000366764 UGGT2Q9NYU1 1516 aa14.52□□□□□ -0.09
CDC42BPA-202ENST00000366764 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
CDC42BPA-202ENST00000366764 APBB1O00213 710 aa14.51□□□□□ -0.09
CDC42BPA-202ENST00000366764 EIF2AK4Q9P2K8 1649 aaKnown RBP14.51□□□□□ -0.09
CDC42BPA-202ENST00000366764 MAP7D2Q96T17 732 aa14.5□□□□□ -0.09
CDC42BPA-202ENST00000366764 GNAI1P63096 354 aa14.5□□□□□ -0.09
CDC42BPA-202ENST00000366764 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
CDC42BPA-202ENST00000366764 DIAPH1O60610 1272 aaKnown RBP14.5□□□□□ -0.09
CDC42BPA-202ENST00000366764 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
CDC42BPA-202ENST00000366764 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
CDC42BPA-202ENST00000366764 INTS3Q68E01 1043 aaKnown RBP14.49□□□□□ -0.09
CDC42BPA-202ENST00000366764 FAM43AQ8N2R8 423 aa14.49□□□□□ -0.09
CDC42BPA-202ENST00000366764 COG3Q96JB2 828 aa14.49□□□□□ -0.09
CDC42BPA-202ENST00000366764 SLC4A3P48751 1232 aa14.48□□□□□ -0.09
CDC42BPA-202ENST00000366764 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
CDC42BPA-202ENST00000366764 ZNF428Q96B54 188 aa14.48□□□□□ -0.09
CDC42BPA-202ENST00000366764 RUFY2Q8WXA3 655 aa14.48□□□□□ -0.09
CDC42BPA-202ENST00000366764 GNL2Q13823 731 aaKnown RBP14.47□□□□□ -0.09
CDC42BPA-202ENST00000366764 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
CDC42BPA-202ENST00000366764 ARHGEF12Q9NZN5 1544 aa14.47□□□□□ -0.09
CDC42BPA-202ENST00000366764 BCL2L13Q9BXK5 485 aa14.47□□□□□ -0.09
CDC42BPA-202ENST00000366764 MAGI1Q96QZ7 1491 aaPredicted RBP14.47□□□□□ -0.09
CDC42BPA-202ENST00000366764 CIZ1Q9ULV3 898 aaPredicted RBP14.46□□□□□ -0.09
CDC42BPA-202ENST00000366764 ABCC5O15440 1437 aa14.46□□□□□ -0.09
CDC42BPA-202ENST00000366764 NKTRP30414 1462 aaKnown RBP14.46□□□□□ -0.1
CDC42BPA-202ENST00000366764 MCM2P49736 904 aa14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 CDC45O75419 566 aa14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 RIPK4P57078 832 aa14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 RALGAPBQ86X10 1494 aa14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 PRG4Q92954 1404 aaPredicted RBP14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 RAPGEF6Q8TEU7 1601 aa14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 MBD3O95983 291 aa14.45□□□□□ -0.1
CDC42BPA-202ENST00000366764 RABEP1Q15276 862 aa14.44□□□□□ -0.1
CDC42BPA-202ENST00000366764 PANK1Q8TE04 598 aa14.44□□□□□ -0.1
CDC42BPA-202ENST00000366764 FAM135AQ9P2D6 1515 aa14.44□□□□□ -0.1
CDC42BPA-202ENST00000366764 ADGBQ8N7X0 1667 aa14.43□□□□□ -0.1
CDC42BPA-202ENST00000366764 NASPP49321 788 aaPredicted RBP14.43□□□□□ -0.1
CDC42BPA-202ENST00000366764 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
CDC42BPA-202ENST00000366764 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.43□□□□□ -0.1
CDC42BPA-202ENST00000366764 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
CDC42BPA-202ENST00000366764 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 TCP11L2Q8N4U5 519 aa14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 CDCA7LQ96GN5 454 aa14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 LRRFIP1Q32MZ4 808 aaKnown RBP14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 SLC4A10Q6U841 1118 aa14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 GCC1Q96CN9 775 aa14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 ZKSCAN1P17029 563 aaPredicted RBP14.42□□□□□ -0.1
CDC42BPA-202ENST00000366764 TPM2P07951 284 aa14.41□□□□□ -0.1
CDC42BPA-202ENST00000366764 TCOF1Q13428 1488 aaKnown RBP14.41□□□□□ -0.1
CDC42BPA-202ENST00000366764 KAT6BQ8WYB5 2073 aa14.41□□□□□ -0.1
CDC42BPA-202ENST00000366764 TPM3P06753 285 aa14.4□□□□□ -0.1
CDC42BPA-202ENST00000366764 HSP90AB4PQ58FF6 505 aa14.4□□□□□ -0.1
CDC42BPA-202ENST00000366764 AMPHP49418 695 aa14.4□□□□□ -0.1
CDC42BPA-202ENST00000366764 DIAPH3Q9NSV4 1193 aa14.4□□□□□ -0.1
CDC42BPA-202ENST00000366764 TRAK2O60296 914 aa14.4□□□□□ -0.11
CDC42BPA-202ENST00000366764 RPGRIP1LQ68CZ1 1315 aa14.39□□□□□ -0.11
CDC42BPA-202ENST00000366764 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
CDC42BPA-202ENST00000366764 CCDC39Q9UFE4 941 aa14.39□□□□□ -0.11
CDC42BPA-202ENST00000366764 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 NUP160Q12769 1436 aa14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 SOX12O15370 315 aa14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 FRAT2O75474 233 aaPredicted RBP14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
CDC42BPA-202ENST00000366764 CCDC173Q0VFZ6 552 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms