RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 EID1Q9Y6B2 187 aa9.96□□□□□ -0.82
RNU1-55P-201ENST00000365510 NUP155O75694 1391 aa9.96□□□□□ -0.82
RNU1-55P-201ENST00000365510 KANK1Q14678 1352 aa9.96□□□□□ -0.82
RNU1-55P-201ENST00000365510 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.82
RNU1-55P-201ENST00000365510 ZC3H13Q5T200 1668 aaKnown RBP9.96□□□□□ -0.82
RNU1-55P-201ENST00000365510 KCNA6P17658 529 aa9.95□□□□□ -0.82
RNU1-55P-201ENST00000365510 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
RNU1-55P-201ENST00000365510 TMEM2Q9UHN6 1383 aa9.94□□□□□ -0.82
RNU1-55P-201ENST00000365510 PIK3C2BO00750 1634 aa9.93□□□□□ -0.82
RNU1-55P-201ENST00000365510 ARHGAP23Q9P227 1491 aa9.93□□□□□ -0.82
RNU1-55P-201ENST00000365510 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
RNU1-55P-201ENST00000365510 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
RNU1-55P-201ENST00000365510 CLSPNQ9HAW4 1339 aa9.92□□□□□ -0.82
RNU1-55P-201ENST00000365510 MPHOSPH9Q99550 1183 aa9.91□□□□□ -0.82
RNU1-55P-201ENST00000365510 SLAIN2Q9P270 581 aa9.91□□□□□ -0.82
RNU1-55P-201ENST00000365510 SLIT1O75093 1534 aa9.9□□□□□ -0.82
RNU1-55P-201ENST00000365510 LMTK2Q8IWU2 1503 aa9.9□□□□□ -0.82
RNU1-55P-201ENST00000365510 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.83
RNU1-55P-201ENST00000365510 TET3O43151 1660 aa9.9□□□□□ -0.83
RNU1-55P-201ENST00000365510 EFCAB6Q5THR3 1501 aa9.89□□□□□ -0.83
RNU1-55P-201ENST00000365510 NUTM2BA6NNL0 878 aaPredicted RBP9.88□□□□□ -0.83
RNU1-55P-201ENST00000365510 NUTM2EB1AL46 878 aaPredicted RBP9.88□□□□□ -0.83
RNU1-55P-201ENST00000365510 NUTM2AQ8IVF1 878 aaPredicted RBP9.88□□□□□ -0.83
RNU1-55P-201ENST00000365510 DDX17Q92841 729 aaKnown RBP9.88□□□□□ -0.83
RNU1-55P-201ENST00000365510 ARHGAP31Q2M1Z3 1444 aa9.88□□□□□ -0.83
RNU1-55P-201ENST00000365510 SYNMO15061 1565 aa9.88□□□□□ -0.83
RNU1-55P-201ENST00000365510 RPRD2Q5VT52 1461 aaKnown RBP9.87□□□□□ -0.83
RNU1-55P-201ENST00000365510 ROBO1Q9Y6N7 1651 aa9.87□□□□□ -0.83
RNU1-55P-201ENST00000365510 SETD1AO15047 1707 aaKnown RBP9.86□□□□□ -0.83
RNU1-55P-201ENST00000365510 PPP1R15AO75807 674 aaPredicted RBP9.86□□□□□ -0.83
RNU1-55P-201ENST00000365510 C14orf37Q86TY3 774 aa9.86□□□□□ -0.83
RNU1-55P-201ENST00000365510 MYO5BQ9ULV0 1848 aa9.86□□□□□ -0.83
RNU1-55P-201ENST00000365510 ANKRD30BQ9BXX2 1392 aa9.85□□□□□ -0.83
RNU1-55P-201ENST00000365510 E9PCH4 1651 aa9.84□□□□□ -0.83
RNU1-55P-201ENST00000365510 NOS1P29475 1434 aa9.84□□□□□ -0.83
RNU1-55P-201ENST00000365510 FOXD1Q16676 465 aa9.84□□□□□ -0.83
RNU1-55P-201ENST00000365510 RIMS2Q9UQ26 1411 aa9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 TRPM2O94759 1503 aa9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 ZEB1P37275 1124 aaPredicted RBP9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 MEX3CQ5U5Q3 659 aaKnown RBP9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 MSH6P52701 1360 aa9.83□□□□□ -0.84
RNU1-55P-201ENST00000365510 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
RNU1-55P-201ENST00000365510 LRP6O75581 1613 aa9.82□□□□□ -0.84
RNU1-55P-201ENST00000365510 SPHKAPQ2M3C7 1700 aa9.82□□□□□ -0.84
RNU1-55P-201ENST00000365510 AMOTL2Q9Y2J4 779 aa9.82□□□□□ -0.84
RNU1-55P-201ENST00000365510 TBX22Q9Y458 520 aa9.82□□□□□ -0.84
RNU1-55P-201ENST00000365510 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
RNU1-55P-201ENST00000365510 ZFYVE9O95405 1425 aa9.81□□□□□ -0.84
RNU1-55P-201ENST00000365510 PTPRUQ92729 1446 aa9.81□□□□□ -0.84
RNU1-55P-201ENST00000365510 JCADQ9P266 1359 aa9.8□□□□□ -0.84
RNU1-55P-201ENST00000365510 ADAMTS13Q76LX8 1427 aa9.8□□□□□ -0.84
RNU1-55P-201ENST00000365510 CHD2O14647 1828 aaKnown RBP9.79□□□□□ -0.84
RNU1-55P-201ENST00000365510 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
RNU1-55P-201ENST00000365510 ATF3P18847 181 aa9.79□□□□□ -0.84
RNU1-55P-201ENST00000365510 NEUROD1Q13562 356 aa9.79□□□□□ -0.84
RNU1-55P-201ENST00000365510 BRINP3Q76B58 766 aa9.79□□□□□ -0.84
RNU1-55P-201ENST00000365510 PLEKHG1Q9ULL1 1385 aa9.78□□□□□ -0.84
RNU1-55P-201ENST00000365510 ADGRB3O60242 1522 aa9.78□□□□□ -0.84
RNU1-55P-201ENST00000365510 SIN3AQ96ST3 1273 aa9.78□□□□□ -0.84
RNU1-55P-201ENST00000365510 C19orf44Q9H6X5 657 aa9.78□□□□□ -0.84
RNU1-55P-201ENST00000365510 TMEM131LA2VDJ0 1609 aa9.77□□□□□ -0.85
RNU1-55P-201ENST00000365510 CLTCL1P53675 1640 aa9.77□□□□□ -0.85
RNU1-55P-201ENST00000365510 COL16A1Q07092 1604 aaPredicted RBP9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 ADAMTS2O95450 1211 aa9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 RXRBP28702 533 aa9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 HDGFP51858 240 aaKnown RBP9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 AFF2P51816 1311 aa9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
RNU1-55P-201ENST00000365510 NWD1Q149M9 1564 aa9.75□□□□□ -0.85
RNU1-55P-201ENST00000365510 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
RNU1-55P-201ENST00000365510 CADPS2Q86UW7 1296 aa9.75□□□□□ -0.85
RNU1-55P-201ENST00000365510 C8orf37Q96NL8 207 aa9.75□□□□□ -0.85
RNU1-55P-201ENST00000365510 QTRT2Q9H974 415 aaKnown RBP9.75□□□□□ -0.85
RNU1-55P-201ENST00000365510 METP08581 1390 aa9.75□□□□□ -0.85
RNU1-55P-201ENST00000365510 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
RNU1-55P-201ENST00000365510 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.74□□□□□ -0.85
RNU1-55P-201ENST00000365510 ORAI2Q96SN7 254 aa9.74□□□□□ -0.85
RNU1-55P-201ENST00000365510 NKTRP30414 1462 aaKnown RBP9.73□□□□□ -0.85
RNU1-55P-201ENST00000365510 KDM5AP29375 1690 aaKnown RBP9.73□□□□□ -0.85
RNU1-55P-201ENST00000365510 SPATA31E1Q6ZUB1 1445 aa9.73□□□□□ -0.85
RNU1-55P-201ENST00000365510 SPATA31A6Q5VVP1 1343 aa9.72□□□□□ -0.85
RNU1-55P-201ENST00000365510 KIF1BO60333 1816 aa9.72□□□□□ -0.85
RNU1-55P-201ENST00000365510 PLEKHG5O94827 1062 aa9.71□□□□□ -0.86
RNU1-55P-201ENST00000365510 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.86
RNU1-55P-201ENST00000365510 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
RNU1-55P-201ENST00000365510 L3MBTL2Q969R5 705 aa9.7□□□□□ -0.86
RNU1-55P-201ENST00000365510 NGLY1Q96IV0 654 aa9.7□□□□□ -0.86
RNU1-55P-201ENST00000365510 MST1RQ04912 1400 aa9.69□□□□□ -0.86
RNU1-55P-201ENST00000365510 RGL3Q3MIN7 710 aa9.69□□□□□ -0.86
RNU1-55P-201ENST00000365510 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
RNU1-55P-201ENST00000365510 LRRC59Q96AG4 307 aaKnown RBP9.68□□□□□ -0.86
RNU1-55P-201ENST00000365510 MYOM2P54296 1465 aa9.67□□□□□ -0.86
RNU1-55P-201ENST00000365510 RPGRIP1LQ68CZ1 1315 aa9.67□□□□□ -0.86
RNU1-55P-201ENST00000365510 STAC3Q96MF2 364 aa9.67□□□□□ -0.86
RNU1-55P-201ENST00000365510 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
RNU1-55P-201ENST00000365510 NRXN3Q9Y4C0 1643 aa9.67□□□□□ -0.86
RNU1-55P-201ENST00000365510 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms