RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 CCDC144AA2RUR9 1427 aa9.89□□□□□ -0.83
CTNND1-204ENST00000361796 EVA1CP58658 441 aa9.89□□□□□ -0.83
CTNND1-204ENST00000361796 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
CTNND1-204ENST00000361796 WIZO95785 1651 aa9.89□□□□□ -0.83
CTNND1-204ENST00000361796 E9PSI1 815 aa9.88□□□□□ -0.83
CTNND1-204ENST00000361796 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-204ENST00000361796 VSIG10Q8N0Z9 540 aa9.88□□□□□ -0.83
CTNND1-204ENST00000361796 C9orf78Q9NZ63 289 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-204ENST00000361796 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
CTNND1-204ENST00000361796 PRKRIP1Q9H875 184 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-204ENST00000361796 USP47Q96K76 1375 aa9.88□□□□□ -0.83
CTNND1-204ENST00000361796 CTDP1Q9Y5B0 961 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-204ENST00000361796 PHLDB1Q86UU1 1377 aa9.88□□□□□ -0.83
CTNND1-204ENST00000361796 HMOX1P09601 288 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 HDAC5Q9UQL6 1122 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 CGNL1Q0VF96 1302 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 RIPK4P57078 832 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 TEFQ10587 303 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 ZNF428Q96B54 188 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 KIF3AQ9Y496 699 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 TSR1Q2NL82 804 aaKnown RBP9.87□□□□□ -0.83
CTNND1-204ENST00000361796 ZNF771Q7L3S4 317 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-204ENST00000361796 CCDC18Q5T9S5 1454 aa9.87□□□□□ -0.83
CTNND1-204ENST00000361796 VPS37CA5D8V6 355 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-204ENST00000361796 DHX16O60231 1041 aaKnown RBP9.86□□□□□ -0.83
CTNND1-204ENST00000361796 IFIT2P09913 472 aaKnown RBP9.86□□□□□ -0.83
CTNND1-204ENST00000361796 BICD2Q8TD16 824 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 NUTM2GQ5VZR2 741 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 FAM13BQ9NYF5 915 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 FYB1O15117 783 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 SYNE3Q6ZMZ3 975 aa9.86□□□□□ -0.83
CTNND1-204ENST00000361796 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
CTNND1-204ENST00000361796 LNPKQ9C0E8 428 aa9.85□□□□□ -0.83
CTNND1-204ENST00000361796 PANK1Q8TE04 598 aa9.85□□□□□ -0.83
CTNND1-204ENST00000361796 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
CTNND1-204ENST00000361796 EVC2Q86UK5 1308 aa9.85□□□□□ -0.83
CTNND1-204ENST00000361796 NFXL1Q6ZNB6 911 aa9.85□□□□□ -0.83
CTNND1-204ENST00000361796 ZBED9Q6R2W3 1325 aa9.84□□□□□ -0.83
CTNND1-204ENST00000361796 FKBP5Q13451 457 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-204ENST00000361796 TRIM29Q14134 588 aa9.84□□□□□ -0.83
CTNND1-204ENST00000361796 TPM2P07951 284 aa9.84□□□□□ -0.83
CTNND1-204ENST00000361796 AIMP1Q12904 312 aaKnown RBP9.84□□□□□ -0.83
CTNND1-204ENST00000361796 RUSC2Q8N2Y8 1516 aa9.84□□□□□ -0.83
CTNND1-204ENST00000361796 DZIP1LQ8IYY4 767 aaKnown RBP9.84□□□□□ -0.83
CTNND1-204ENST00000361796 TCEAL9Q9UHQ7 104 aa9.84□□□□□ -0.83
CTNND1-204ENST00000361796 DIAPH1O60610 1272 aaKnown RBP9.84□□□□□ -0.83
CTNND1-204ENST00000361796 HOMER1Q86YM7 354 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 NEXNQ0ZGT2 675 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 SKOR2Q2VWA4 1001 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-204ENST00000361796 RSPH6AQ9H0K4 717 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 CPLX1O14810 134 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 TPM1P09493 284 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 VPS37DQ86XT2 251 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 ATP6V1DQ9Y5K8 247 aa9.83□□□□□ -0.84
CTNND1-204ENST00000361796 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTNND1-204ENST00000361796 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-204ENST00000361796 PDS5BQ9NTI5 1447 aa9.82□□□□□ -0.84
CTNND1-204ENST00000361796 DDX19BQ9UMR2 479 aa9.82□□□□□ -0.84
CTNND1-204ENST00000361796 ZKSCAN1P17029 563 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-204ENST00000361796 SETQ01105 290 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-204ENST00000361796 CCDC27Q2M243 656 aa9.81□□□□□ -0.84
CTNND1-204ENST00000361796 TSPYL4Q9UJ04 414 aa9.81□□□□□ -0.84
CTNND1-204ENST00000361796 USP35Q9P2H5 1018 aa9.81□□□□□ -0.84
CTNND1-204ENST00000361796 REC8O95072 547 aa9.81□□□□□ -0.84
CTNND1-204ENST00000361796 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
CTNND1-204ENST00000361796 RUFY2Q8WXA3 655 aa9.81□□□□□ -0.84
CTNND1-204ENST00000361796 NEUROD6Q96NK8 337 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 G3BP1Q13283 466 aaKnown RBP eCLIP9.8□□□□□ -0.848e-9■□□□□ 11.1
CTNND1-204ENST00000361796 JPH4Q96JJ6 628 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 GGNBP2Q9H3C7 697 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 PSME1Q06323 249 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 NAP1L1P55209 391 aaKnown RBP9.8□□□□□ -0.84
CTNND1-204ENST00000361796 TTLL5Q6EMB2 1281 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 AMOTL1Q8IY63 956 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 RNF214Q8ND24 703 aa9.8□□□□□ -0.84
CTNND1-204ENST00000361796 C1orf115Q9H7X2 142 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 IFT57Q9NWB7 429 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 FAM177BA6PVY3 158 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 CCDC70Q6NSX1 233 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 SASS6Q6UVJ0 657 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 C22orf23Q9BZE7 217 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 CHMP5Q9NZZ3 219 aa9.79□□□□□ -0.84
CTNND1-204ENST00000361796 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
CTNND1-204ENST00000361796 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
CTNND1-204ENST00000361796 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-204ENST00000361796 TRDNQ13061 729 aa9.78□□□□□ -0.84
CTNND1-204ENST00000361796 PDILTQ8N807 584 aa9.78□□□□□ -0.84
CTNND1-204ENST00000361796 RUNDC1Q96C34 613 aa9.78□□□□□ -0.84
CTNND1-204ENST00000361796 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
CTNND1-204ENST00000361796 CPLX2Q6PUV4 134 aaKnown RBP9.77□□□□□ -0.84
CTNND1-204ENST00000361796 CCAR1Q8IX12 1150 aaKnown RBP9.77□□□□□ -0.84
CTNND1-204ENST00000361796 ZNF644Q9H582 1327 aaPredicted RBP9.77□□□□□ -0.84
CTNND1-204ENST00000361796 SKIDA1Q1XH10 827 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 TMEM132EQ6IEE7 984 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 RIC3Q7Z5B4 369 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms