RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 FOXK2Q01167 660 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 AKAP4Q5JQC9 854 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 SPINK5Q9NQ38 1064 aaPredicted RBP4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 GTF3C3Q9Y5Q9 886 aa4.24□□□□□ -1.73
PCDH11X-203ENST00000361724 SECISBP2LQ93073 1101 aaKnown RBP4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 CFTRP13569 1480 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 NBPF11Q86T75 865 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 LTBP4Q8N2S1 1624 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 TCIRG1Q13488 830 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 ILDR2Q71H61 639 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 USP35Q9P2H5 1018 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 KCNA6P17658 529 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 PKN2Q16513 984 aaKnown RBP4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 NPATQ14207 1427 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 FGD6Q6ZV73 1430 aa4.23□□□□□ -1.73
PCDH11X-203ENST00000361724 SMARCC1Q92922 1105 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 PLEKHG2Q9H7P9 1386 aa4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 ABCA8O94911 1581 aa4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 HOXD10P28358 340 aa4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 GTF2E1P29083 439 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 BLMP54132 1417 aaPredicted RBP4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 ABT1Q9ULW3 272 aaKnown RBP4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 ATP10AO60312 1499 aa4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 SDHBP21912 280 aa4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 UTP14AQ9BVJ6 771 aaKnown RBP4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 PRDM11Q9NQV5 511 aa4.22□□□□□ -1.73
PCDH11X-203ENST00000361724 DCDC2CA8MYV0 355 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 PDE6BP35913 854 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 NGDNQ8NEJ9 315 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 PRDM10Q9NQV6 1147 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 SLC52A1Q9NWF4 448 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 NBPF1Q3BBV0 1214 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 NBPF9Q3BBW0 867 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 MAPKBP1O60336 1514 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 ABCC2Q92887 1545 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 NCKAP5LQ9HCH0 1330 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 NKX2-3Q8TAU0 364 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 RBM46Q8TBY0 533 aaKnown RBP4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 ANP32EQ9BTT0 268 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 TOPBP1Q92547 1522 aa4.21□□□□□ -1.74
PCDH11X-203ENST00000361724 DMWDQ09019 674 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 AFAP1Q8N556 730 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 PRRX2Q99811 253 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 CCNB3Q8WWL7 1395 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 MROH2BQ7Z745 1585 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 GRIN2AQ12879 1464 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 PRPF38BQ5VTL8 546 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 ARXQ96QS3 562 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 LBHD1Q9BQE6 289 aaPredicted RBP4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 SLAIN2Q9P270 581 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 TTC37Q6PGP7 1564 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 KDM5DQ9BY66 1539 aa4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 NOLC1Q14978 699 aaKnown RBP eCLIP4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 INTS3Q68E01 1043 aaKnown RBP4.2□□□□□ -1.74
PCDH11X-203ENST00000361724 EPRSP07814 1512 aaKnown RBP4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 KIF3BO15066 747 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 TOMM70O94826 608 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 HOOK2Q96ED9 719 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 AK7Q96M32 723 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 PARP3Q9Y6F1 533 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 CLASP1Q7Z460 1538 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 BRD4O60885 1362 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 CARMIL1Q5VZK9 1371 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 THOC2Q8NI27 1593 aaKnown RBP4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 PAK3O75914 559 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 BIN2Q9UBW5 565 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 MAP3K13O43283 966 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 GRIPAP1Q4V328 841 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 JDP2Q8WYK2 163 aa4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 NPHP4O75161 1426 aaPredicted RBP4.19□□□□□ -1.74
PCDH11X-203ENST00000361724 MTFR1LQ9H019 292 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 CDK12Q9NYV4 1490 aaPredicted RBP4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 EIF6P56537 245 aaKnown RBP4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 NBPF10Q6P3W6 841 aaKnown RBP4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 CCDC102AQ96A19 550 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 EEA1Q15075 1411 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 CLSPNQ9HAW4 1339 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 A2ML1A8K2U0 1454 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 KIF15Q9NS87 1388 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 VGFO15240 615 aaPredicted RBP4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 ARHGEF10O15013 1369 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 C1QTNF1Q9BXJ1 281 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 ZFYVE16Q7Z3T8 1539 aa4.18□□□□□ -1.74
PCDH11X-203ENST00000361724 CRBNQ96SW2 442 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 UBXN2AP68543 259 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 R3HDM1Q15032 1099 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 SLC4A8Q2Y0W8 1093 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 TFCP2L1Q9NZI6 479 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 MAGI3Q5TCQ9 1506 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 ARHGAP27Q6ZUM4 889 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 PPARGC1BQ86YN6 1023 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 MTUS2Q5JR59 1369 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 KDM5CP41229 1560 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 A0A087WZG4 1122 aa4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 TTLL12Q14166 644 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-203ENST00000361724 SCAPERQ9BY12 1400 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 UNC5CLQ8IV45 518 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 JAG2Q9Y219 1238 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 CAPN8A6NHC0 703 aa4.16□□□□□ -1.74
PCDH11X-203ENST00000361724 PNMA8AQ86V59 439 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms