RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
CLSTN1-201ENST00000361311 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
CLSTN1-201ENST00000361311 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
CLSTN1-201ENST00000361311 KIAA1107Q9UPP5 1409 aa19.7■□□□□ 0.74
CLSTN1-201ENST00000361311 TRIM6-TRIM34B2RNG4 842 aa19.69■□□□□ 0.74
CLSTN1-201ENST00000361311 CAVIN1Q6NZI2 390 aaKnown RBP19.69■□□□□ 0.74
CLSTN1-201ENST00000361311 ELL2O00472 640 aaPredicted RBP19.69■□□□□ 0.74
CLSTN1-201ENST00000361311 HMMRO75330 724 aa19.69■□□□□ 0.74
CLSTN1-201ENST00000361311 ANKRD30BQ9BXX2 1392 aa19.69■□□□□ 0.74
CLSTN1-201ENST00000361311 EFCAB5A4FU69 1503 aa19.68■□□□□ 0.74
CLSTN1-201ENST00000361311 STK26Q9P289 416 aa19.68■□□□□ 0.74
CLSTN1-201ENST00000361311 HDGFL2Q7Z4V5 671 aaPredicted RBP19.68■□□□□ 0.74
CLSTN1-201ENST00000361311 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
CLSTN1-201ENST00000361311 ZMYND15Q9H091 742 aa19.66■□□□□ 0.74
CLSTN1-201ENST00000361311 RNF214Q8ND24 703 aa19.66■□□□□ 0.74
CLSTN1-201ENST00000361311 A0A0U1RQG5 324 aaPredicted RBP19.66■□□□□ 0.74
CLSTN1-201ENST00000361311 CCDC39Q9UFE4 941 aa19.66■□□□□ 0.74
CLSTN1-201ENST00000361311 MLECQ14165 292 aa19.65■□□□□ 0.74
CLSTN1-201ENST00000361311 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
CLSTN1-201ENST00000361311 KIF16BQ96L93 1317 aa19.65■□□□□ 0.74
CLSTN1-201ENST00000361311 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
CLSTN1-201ENST00000361311 SLFN5Q08AF3 891 aa19.65■□□□□ 0.74
CLSTN1-201ENST00000361311 ZNF771Q7L3S4 317 aaPredicted RBP19.65■□□□□ 0.74
CLSTN1-201ENST00000361311 REC8O95072 547 aa19.64■□□□□ 0.73
CLSTN1-201ENST00000361311 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
CLSTN1-201ENST00000361311 TNNT3P45378 269 aaPredicted RBP19.63■□□□□ 0.73
CLSTN1-201ENST00000361311 TBC1D2Q9BYX2 928 aa19.63■□□□□ 0.73
CLSTN1-201ENST00000361311 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
CLSTN1-201ENST00000361311 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
CLSTN1-201ENST00000361311 NAP1L2Q9ULW6 460 aaPredicted RBP19.62■□□□□ 0.73
CLSTN1-201ENST00000361311 ZSCAN30Q86W11 494 aa19.61■□□□□ 0.73
CLSTN1-201ENST00000361311 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
CLSTN1-201ENST00000361311 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
CLSTN1-201ENST00000361311 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
CLSTN1-201ENST00000361311 SLC4A10Q6U841 1118 aa19.6■□□□□ 0.73
CLSTN1-201ENST00000361311 C14orf37Q86TY3 774 aa19.6■□□□□ 0.73
CLSTN1-201ENST00000361311 TERF2IPQ9NYB0 399 aa19.6■□□□□ 0.73
CLSTN1-201ENST00000361311 KIF3BO15066 747 aa19.6■□□□□ 0.73
CLSTN1-201ENST00000361311 CLCN1P35523 988 aa19.6■□□□□ 0.73
CLSTN1-201ENST00000361311 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
CLSTN1-201ENST00000361311 PRPF40AO75400 957 aaKnown RBP19.58■□□□□ 0.73
CLSTN1-201ENST00000361311 CDC45O75419 566 aa19.58■□□□□ 0.73
CLSTN1-201ENST00000361311 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.73
CLSTN1-201ENST00000361311 PODXL2Q9NZ53 605 aa19.58■□□□□ 0.73
CLSTN1-201ENST00000361311 XRCC6P12956 609 aaKnown RBP eCLIP19.58■□□□□ 0.72
CLSTN1-201ENST00000361311 TAOK2Q9UL54 1235 aa19.58■□□□□ 0.72
CLSTN1-201ENST00000361311 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.72
CLSTN1-201ENST00000361311 RIPK4P57078 832 aa19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 INTS3Q68E01 1043 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 UQCRHLA0A096LP55 91 aa19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 HTATSF1O43719 755 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 UQCRHP07919 91 aa19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 PDCL3Q9H2J4 239 aa19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 DUSP27Q5VZP5 1158 aa19.57■□□□□ 0.72
CLSTN1-201ENST00000361311 C8orf34Q49A92 452 aa19.56■□□□□ 0.72
CLSTN1-201ENST00000361311 RPRD2Q5VT52 1461 aaKnown RBP19.56■□□□□ 0.72
CLSTN1-201ENST00000361311 GGT6Q6P531 493 aa19.56■□□□□ 0.72
CLSTN1-201ENST00000361311 RILPL2Q969X0 211 aa19.56■□□□□ 0.72
CLSTN1-201ENST00000361311 SUPT6HQ7KZ85 1726 aaKnown RBP19.55■□□□□ 0.72
CLSTN1-201ENST00000361311 DAPK1P53355 1430 aa19.55■□□□□ 0.72
CLSTN1-201ENST00000361311 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
CLSTN1-201ENST00000361311 LMOD3Q0VAK6 560 aa19.55■□□□□ 0.72
CLSTN1-201ENST00000361311 SOX12O15370 315 aa19.55■□□□□ 0.72
CLSTN1-201ENST00000361311 MBD3O95983 291 aa19.54■□□□□ 0.72
CLSTN1-201ENST00000361311 HMGN5P82970 282 aaKnown RBP19.54■□□□□ 0.72
CLSTN1-201ENST00000361311 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
CLSTN1-201ENST00000361311 PANK2Q9BZ23 570 aa19.54■□□□□ 0.72
CLSTN1-201ENST00000361311 DIAPH3Q9NSV4 1193 aa19.53■□□□□ 0.72
CLSTN1-201ENST00000361311 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
CLSTN1-201ENST00000361311 SPAG9O60271 1321 aaKnown RBP19.53■□□□□ 0.72
CLSTN1-201ENST00000361311 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
CLSTN1-201ENST00000361311 MTHFSP49914 203 aa19.53■□□□□ 0.72
CLSTN1-201ENST00000361311 STK31Q9BXU1 1019 aa19.53■□□□□ 0.72
CLSTN1-201ENST00000361311 RABEP1Q15276 862 aa19.52■□□□□ 0.72
CLSTN1-201ENST00000361311 RNF123Q5XPI4 1314 aa19.52■□□□□ 0.72
CLSTN1-201ENST00000361311 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
CLSTN1-201ENST00000361311 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
CLSTN1-201ENST00000361311 API5Q9BZZ5 524 aaKnown RBP19.52■□□□□ 0.72
CLSTN1-201ENST00000361311 ZNF592Q92610 1267 aa19.52■□□□□ 0.71
CLSTN1-201ENST00000361311 ROCK1Q13464 1354 aa19.51■□□□□ 0.71
CLSTN1-201ENST00000361311 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
CLSTN1-201ENST00000361311 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.717e-7■■■■■ 35.9
CLSTN1-201ENST00000361311 ERBINQ96RT1 1412 aa19.51■□□□□ 0.71
CLSTN1-201ENST00000361311 IGHDP01880 384 aa19.5■□□□□ 0.71
CLSTN1-201ENST00000361311 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
CLSTN1-201ENST00000361311 TBC1D32Q96NH3 1257 aa19.5■□□□□ 0.71
CLSTN1-201ENST00000361311 ANO2Q9NQ90 1003 aa19.49■□□□□ 0.71
CLSTN1-201ENST00000361311 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
CLSTN1-201ENST00000361311 WWC1Q8IX03 1113 aa19.48■□□□□ 0.71
CLSTN1-201ENST00000361311 STAC3Q96MF2 364 aa19.48■□□□□ 0.71
CLSTN1-201ENST00000361311 NUTM2DQ5VT03 806 aaPredicted RBP19.48■□□□□ 0.71
CLSTN1-201ENST00000361311 TSPY26PQ9H489 355 aa19.48■□□□□ 0.71
CLSTN1-201ENST00000361311 RRAGDQ9NQL2 400 aaPredicted RBP19.48■□□□□ 0.71
CLSTN1-201ENST00000361311 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
CLSTN1-201ENST00000361311 WDR63Q8IWG1 891 aa19.47■□□□□ 0.71
CLSTN1-201ENST00000361311 TNPO1Q92973 898 aaKnown RBP19.47■□□□□ 0.71
CLSTN1-201ENST00000361311 MPNDQ8N594 471 aa19.47■□□□□ 0.71
CLSTN1-201ENST00000361311 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
CLSTN1-201ENST00000361311 GOLGA6L19H0YKK7 550 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms