RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 FOXD4L4Q8WXT5 416 aaPredicted RBP17.72■□□□□ 0.43
PCMTD1-201ENST00000360540 RAPGEF3O95398 923 aa17.72■□□□□ 0.43
PCMTD1-201ENST00000360540 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
PCMTD1-201ENST00000360540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■■■ 40.5
PCMTD1-201ENST00000360540 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
PCMTD1-201ENST00000360540 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
PCMTD1-201ENST00000360540 FAM69CQ0P6D2 419 aa17.71■□□□□ 0.43
PCMTD1-201ENST00000360540 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
PCMTD1-201ENST00000360540 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
PCMTD1-201ENST00000360540 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
PCMTD1-201ENST00000360540 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
PCMTD1-201ENST00000360540 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
PCMTD1-201ENST00000360540 DNTTIP2Q5QJE6 756 aaKnown RBP17.7■□□□□ 0.42
PCMTD1-201ENST00000360540 COG3Q96JB2 828 aa17.69■□□□□ 0.42
PCMTD1-201ENST00000360540 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
PCMTD1-201ENST00000360540 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
PCMTD1-201ENST00000360540 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
PCMTD1-201ENST00000360540 DZIP1LQ8IYY4 767 aaKnown RBP17.69■□□□□ 0.42
PCMTD1-201ENST00000360540 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
PCMTD1-201ENST00000360540 MAPKBP1O60336 1514 aa17.67■□□□□ 0.42
PCMTD1-201ENST00000360540 FOXD4L6Q3SYB3 417 aaPredicted RBP17.67■□□□□ 0.42
PCMTD1-201ENST00000360540 FOXD4L3Q6VB84 417 aaPredicted RBP17.67■□□□□ 0.42
PCMTD1-201ENST00000360540 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
PCMTD1-201ENST00000360540 CSB-PGBD3P0DP91 1061 aa17.67■□□□□ 0.42
PCMTD1-201ENST00000360540 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
PCMTD1-201ENST00000360540 C20orf194Q5TEA3 1177 aa17.66■□□□□ 0.42
PCMTD1-201ENST00000360540 EID1Q9Y6B2 187 aa17.66■□□□□ 0.42
PCMTD1-201ENST00000360540 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
PCMTD1-201ENST00000360540 PTPN23Q9H3S7 1636 aa17.64■□□□□ 0.42
PCMTD1-201ENST00000360540 IQGAP2Q13576 1575 aa17.63■□□□□ 0.41
PCMTD1-201ENST00000360540 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
PCMTD1-201ENST00000360540 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
PCMTD1-201ENST00000360540 MSH5O43196 834 aa17.63■□□□□ 0.41
PCMTD1-201ENST00000360540 EXOSC9Q06265 439 aaKnown RBP17.62■□□□□ 0.41
PCMTD1-201ENST00000360540 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
PCMTD1-201ENST00000360540 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
PCMTD1-201ENST00000360540 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
PCMTD1-201ENST00000360540 MCCP23508 829 aa17.6■□□□□ 0.41
PCMTD1-201ENST00000360540 ROCK1Q13464 1354 aa17.6■□□□□ 0.41
PCMTD1-201ENST00000360540 KIAA1211Q6ZU35 1233 aa17.6■□□□□ 0.41
PCMTD1-201ENST00000360540 RILPL2Q969X0 211 aa17.6■□□□□ 0.41
PCMTD1-201ENST00000360540 GBP4Q96PP9 640 aa17.6■□□□□ 0.41
PCMTD1-201ENST00000360540 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
PCMTD1-201ENST00000360540 CAMSAP2Q08AD1 1489 aa17.59■□□□□ 0.41
PCMTD1-201ENST00000360540 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
PCMTD1-201ENST00000360540 ERBINQ96RT1 1412 aa17.59■□□□□ 0.41
PCMTD1-201ENST00000360540 L1TD1Q5T7N2 865 aaKnown RBP17.59■□□□□ 0.41
PCMTD1-201ENST00000360540 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.41
PCMTD1-201ENST00000360540 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
PCMTD1-201ENST00000360540 CHMP3Q9Y3E7 222 aa17.58■□□□□ 0.4
PCMTD1-201ENST00000360540 GSE1Q14687 1217 aa17.58■□□□□ 0.4
PCMTD1-201ENST00000360540 CABP1Q9NZU7 370 aa17.58■□□□□ 0.4
PCMTD1-201ENST00000360540 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
PCMTD1-201ENST00000360540 TXNDC2Q86VQ3 553 aa17.57■□□□□ 0.4
PCMTD1-201ENST00000360540 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
PCMTD1-201ENST00000360540 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
PCMTD1-201ENST00000360540 HMMRO75330 724 aa17.57■□□□□ 0.4
PCMTD1-201ENST00000360540 GOLGA6L4A6NEF3 574 aa17.56■□□□□ 0.4
PCMTD1-201ENST00000360540 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
PCMTD1-201ENST00000360540 NFKBIBQ15653 356 aa17.56■□□□□ 0.4
PCMTD1-201ENST00000360540 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
PCMTD1-201ENST00000360540 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
PCMTD1-201ENST00000360540 ZRSR1Q15695 479 aaKnown RBP17.55■□□□□ 0.4
PCMTD1-201ENST00000360540 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
PCMTD1-201ENST00000360540 ARID3AQ99856 593 aa17.55■□□□□ 0.4
PCMTD1-201ENST00000360540 BACH2Q9BYV9 841 aa17.55■□□□□ 0.4
PCMTD1-201ENST00000360540 GLIPR1L2Q4G1C9 344 aa17.54■□□□□ 0.4
PCMTD1-201ENST00000360540 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
PCMTD1-201ENST00000360540 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
PCMTD1-201ENST00000360540 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
PCMTD1-201ENST00000360540 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
PCMTD1-201ENST00000360540 GRIN2AQ12879 1464 aa17.52■□□□□ 0.4
PCMTD1-201ENST00000360540 THUMPD2Q9BTF0 503 aaKnown RBP17.52■□□□□ 0.4
PCMTD1-201ENST00000360540 FRAT2O75474 233 aaPredicted RBP17.51■□□□□ 0.39
PCMTD1-201ENST00000360540 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
PCMTD1-201ENST00000360540 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
PCMTD1-201ENST00000360540 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
PCMTD1-201ENST00000360540 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
PCMTD1-201ENST00000360540 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
PCMTD1-201ENST00000360540 PLEKHH2Q8IVE3 1493 aa17.49■□□□□ 0.39
PCMTD1-201ENST00000360540 NPHP1O15259 732 aa17.49■□□□□ 0.39
PCMTD1-201ENST00000360540 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
PCMTD1-201ENST00000360540 MSNP26038 577 aaKnown RBP17.48■□□□□ 0.39
PCMTD1-201ENST00000360540 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
PCMTD1-201ENST00000360540 CUL7Q14999 1698 aa17.48■□□□□ 0.39
PCMTD1-201ENST00000360540 TEFQ10587 303 aa17.48■□□□□ 0.39
PCMTD1-201ENST00000360540 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
PCMTD1-201ENST00000360540 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
PCMTD1-201ENST00000360540 TSPYL4Q9UJ04 414 aa17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 FBLN1P23142 703 aa17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 NLRP6P59044 892 aa17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 WAPLQ7Z5K2 1190 aa17.47■□□□□ 0.39
PCMTD1-201ENST00000360540 CCDC141Q6ZP82 1450 aa17.46■□□□□ 0.39
PCMTD1-201ENST00000360540 GNAI1P63096 354 aa17.46■□□□□ 0.39
PCMTD1-201ENST00000360540 KIF16BQ96L93 1317 aa17.46■□□□□ 0.39
PCMTD1-201ENST00000360540 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
PCMTD1-201ENST00000360540 API5Q9BZZ5 524 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms