RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LTV1Q96GA3 475 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-202ENST00000360093 NUTM2FA1L443 756 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 DDX58O95786 925 aaKnown RBP6.05□□□□□ -1.44
SCN3A-202ENST00000360093 AFAP1Q8N556 730 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 GRIN2AQ12879 1464 aa6.05□□□□□ -1.44
SCN3A-202ENST00000360093 TRIM6-TRIM34B2RNG4 842 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 BRD4O60885 1362 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-202ENST00000360093 DDX19BQ9UMR2 479 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 API5Q9BZZ5 524 aaKnown RBP6.04□□□□□ -1.44
SCN3A-202ENST00000360093 CCDC141Q6ZP82 1450 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 APBB1O00213 710 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 GTF2E1P29083 439 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-202ENST00000360093 KIF16BQ96L93 1317 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 GPRASP1Q5JY77 1395 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 ANKRD30BQ9BXX2 1392 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 PTPN23Q9H3S7 1636 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 ST18O60284 1047 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 GNAI1P63096 354 aa6.04□□□□□ -1.44
SCN3A-202ENST00000360093 PCF11O94913 1555 aaKnown RBP6.04□□□□□ -1.44
SCN3A-202ENST00000360093 G3V3G9 751 aa6.03□□□□□ -1.44
SCN3A-202ENST00000360093 DCAF8Q5TAQ9 597 aa6.03□□□□□ -1.44
SCN3A-202ENST00000360093 ZNF692Q9BU19 519 aaPredicted RBP6.03□□□□□ -1.44
SCN3A-202ENST00000360093 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
SCN3A-202ENST00000360093 THOC2Q8NI27 1593 aaKnown RBP6.03□□□□□ -1.44
SCN3A-202ENST00000360093 WWC1Q8IX03 1113 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 KIF7Q2M1P5 1343 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 CTTNBP2Q8WZ74 1663 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 RRP1P56182 461 aaKnown RBP6.02□□□□□ -1.45
SCN3A-202ENST00000360093 RIPK4P57078 832 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 PLCB2Q00722 1185 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 SMG6Q86US8 1419 aaKnown RBP6.02□□□□□ -1.45
SCN3A-202ENST00000360093 TPM4P67936 248 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 RBM19Q9Y4C8 960 aaKnown RBP6.02□□□□□ -1.45
SCN3A-202ENST00000360093 ITSN2Q9NZM3 1697 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 RAPGEF4Q8WZA2 1011 aa6.02□□□□□ -1.45
SCN3A-202ENST00000360093 TXNDC2Q86VQ3 553 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 RUFY2Q8WXA3 655 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 CLUAP1Q96AJ1 413 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 HSP90AB4PQ58FF6 505 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 C9orf78Q9NZ63 289 aaPredicted RBP6.01□□□□□ -1.45
SCN3A-202ENST00000360093 HSP90B1P14625 803 aaKnown RBP6.01□□□□□ -1.45
SCN3A-202ENST00000360093 ISY1Q9ULR0 285 aaKnown RBP6.01□□□□□ -1.45
SCN3A-202ENST00000360093 RRP7AQ9Y3A4 280 aaKnown RBP6.01□□□□□ -1.45
SCN3A-202ENST00000360093 PHF14O94880 888 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 APAF1O14727 1248 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 FRAT2O75474 233 aaPredicted RBP6.01□□□□□ -1.45
SCN3A-202ENST00000360093 PPP6R1Q9UPN7 881 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 CAMSAP2Q08AD1 1489 aa6.01□□□□□ -1.45
SCN3A-202ENST00000360093 GAS2L2Q8NHY3 880 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 MSNP26038 577 aaKnown RBP6□□□□□ -1.45
SCN3A-202ENST00000360093 HMGB2P26583 209 aaKnown RBP6□□□□□ -1.45
SCN3A-202ENST00000360093 CDK13Q14004 1512 aaKnown RBP6□□□□□ -1.45
SCN3A-202ENST00000360093 TPRNQ4KMQ1 711 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 ATP6V1DQ9Y5K8 247 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 URB2Q14146 1524 aaKnown RBP6□□□□□ -1.45
SCN3A-202ENST00000360093 CD109Q6YHK3 1445 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 REC8O95072 547 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 MFAP1P55081 439 aaKnown RBP6□□□□□ -1.45
SCN3A-202ENST00000360093 FAM161AQ3B820 660 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 AMOTL1Q8IY63 956 aa6□□□□□ -1.45
SCN3A-202ENST00000360093 DZIP1LQ8IYY4 767 aaKnown RBP6□□□□□ -1.45
SCN3A-202ENST00000360093 DRC7Q8IY82 874 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 IPO9Q96P70 1041 aaKnown RBP5.99□□□□□ -1.45
SCN3A-202ENST00000360093 TAOK2Q9UL54 1235 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 ATAD2Q6PL18 1390 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 ANKRD45Q5TZF3 282 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 AEBP2Q6ZN18 517 aaPredicted RBP5.99□□□□□ -1.45
SCN3A-202ENST00000360093 ERBINQ96RT1 1412 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 ARHGEF11O15085 1522 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 KIAA2012Q0VF49 1180 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 ANKLE2Q86XL3 938 aa5.99□□□□□ -1.45
SCN3A-202ENST00000360093 MEX3CQ5U5Q3 659 aaKnown RBP5.98□□□□□ -1.45
SCN3A-202ENST00000360093 NOL10Q9BSC4 688 aaKnown RBP5.98□□□□□ -1.45
SCN3A-202ENST00000360093 ANO8Q9HCE9 1232 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-202ENST00000360093 CT47B1P0C2W7 299 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-202ENST00000360093 NLRP6P59044 892 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 CFAP70Q5T0N1 1121 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 TSPYL4Q9UJ04 414 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 ADGRL1O94910 1474 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 CPLX2Q6PUV4 134 aaKnown RBP5.98□□□□□ -1.45
SCN3A-202ENST00000360093 ABTB2Q8N961 1025 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 CABP2Q9NPB3 220 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 PLEKHO1Q53GL0 409 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-202ENST00000360093 RAPGEF6Q8TEU7 1601 aa5.98□□□□□ -1.45
SCN3A-202ENST00000360093 TULP1O00294 542 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-202ENST00000360093 NAIPQ13075 1403 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 ZKSCAN1P17029 563 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-202ENST00000360093 RNF20Q5VTR2 975 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 TMEM132EQ6IEE7 984 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 PRAM1Q96QH2 718 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 DIAPH3Q9NSV4 1193 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 DDX11L8A8MPP1 907 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 G3BP1Q13283 466 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCN3A-202ENST00000360093 FKBP5Q13451 457 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-202ENST00000360093 NINLQ9Y2I6 1382 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 FAM135AQ9P2D6 1515 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 ERC2O15083 957 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 CCDC30Q5VVM6 783 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 SYNE3Q6ZMZ3 975 aa5.97□□□□□ -1.45
SCN3A-202ENST00000360093 PNISRQ8TF01 805 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms