RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 MBD5Q9P267 1494 aa10.66□□□□□ -0.7
HHLA3-201ENST00000359875 ADGBQ8N7X0 1667 aa10.66□□□□□ -0.7
HHLA3-201ENST00000359875 ZMYM3Q14202 1370 aa10.65□□□□□ -0.7
HHLA3-201ENST00000359875 STRCQ7RTU9 1775 aa10.65□□□□□ -0.7
HHLA3-201ENST00000359875 PSEN1P49768 467 aa10.65□□□□□ -0.7
HHLA3-201ENST00000359875 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
HHLA3-201ENST00000359875 COLQQ9Y215 455 aaPredicted RBP10.65□□□□□ -0.7
HHLA3-201ENST00000359875 FAM135AQ9P2D6 1515 aa10.64□□□□□ -0.71
HHLA3-201ENST00000359875 NCOA1Q15788 1441 aa10.64□□□□□ -0.71
HHLA3-201ENST00000359875 IRX5P78411 483 aaPredicted RBP10.63□□□□□ -0.71
HHLA3-201ENST00000359875 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
HHLA3-201ENST00000359875 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
HHLA3-201ENST00000359875 PLA2R1Q13018 1463 aa10.62□□□□□ -0.71
HHLA3-201ENST00000359875 NCOA2Q15596 1464 aa10.62□□□□□ -0.71
HHLA3-201ENST00000359875 IQSEC2Q5JU85 1478 aa10.62□□□□□ -0.71
HHLA3-201ENST00000359875 CCDC141Q6ZP82 1450 aa10.62□□□□□ -0.71
HHLA3-201ENST00000359875 POTEJP0CG39 1038 aa10.62□□□□□ -0.71
HHLA3-201ENST00000359875 DHX29Q7Z478 1369 aaKnown RBP10.62□□□□□ -0.71
HHLA3-201ENST00000359875 PTPRKQ15262 1439 aa10.61□□□□□ -0.71
HHLA3-201ENST00000359875 CAMSAP2Q08AD1 1489 aa10.61□□□□□ -0.71
HHLA3-201ENST00000359875 ZNF644Q9H582 1327 aaPredicted RBP10.6□□□□□ -0.71
HHLA3-201ENST00000359875 ZNF142P52746 1687 aaPredicted RBP10.6□□□□□ -0.71
HHLA3-201ENST00000359875 CLTCQ00610 1675 aaKnown RBP10.6□□□□□ -0.71
HHLA3-201ENST00000359875 VPS8Q8N3P4 1428 aa10.6□□□□□ -0.71
HHLA3-201ENST00000359875 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
HHLA3-201ENST00000359875 MYO3AQ8NEV4 1616 aa10.6□□□□□ -0.71
HHLA3-201ENST00000359875 GGT6Q6P531 493 aa10.6□□□□□ -0.71
HHLA3-201ENST00000359875 ARHGEF5Q12774 1597 aa10.6□□□□□ -0.71
HHLA3-201ENST00000359875 CEP170BQ9Y4F5 1589 aaPredicted RBP10.6□□□□□ -0.71
HHLA3-201ENST00000359875 MAP3K1Q13233 1512 aa10.59□□□□□ -0.71
HHLA3-201ENST00000359875 PKD2Q13563 968 aa10.59□□□□□ -0.71
HHLA3-201ENST00000359875 LRRC9Q6ZRR7 1453 aa10.58□□□□□ -0.72
HHLA3-201ENST00000359875 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
HHLA3-201ENST00000359875 KDM5DQ9BY66 1539 aa10.58□□□□□ -0.72
HHLA3-201ENST00000359875 TCOF1Q13428 1488 aaKnown RBP10.57□□□□□ -0.72
HHLA3-201ENST00000359875 TSPY4P0CV99 314 aa10.57□□□□□ -0.72
HHLA3-201ENST00000359875 TSPY10P0CW01 314 aa10.57□□□□□ -0.72
HHLA3-201ENST00000359875 A2ML1A8K2U0 1454 aa10.56□□□□□ -0.72
HHLA3-201ENST00000359875 TAOK2Q9UL54 1235 aa10.56□□□□□ -0.72
HHLA3-201ENST00000359875 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
HHLA3-201ENST00000359875 PZPP20742 1482 aa10.55□□□□□ -0.72
HHLA3-201ENST00000359875 KIF3BO15066 747 aa10.55□□□□□ -0.72
HHLA3-201ENST00000359875 MAST1Q9Y2H9 1570 aa10.54□□□□□ -0.72
HHLA3-201ENST00000359875 WASHC2CQ9Y4E1 1318 aa10.54□□□□□ -0.72
HHLA3-201ENST00000359875 RIOK3O14730 519 aaKnown RBP10.53□□□□□ -0.72
HHLA3-201ENST00000359875 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
HHLA3-201ENST00000359875 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
HHLA3-201ENST00000359875 NLRP1Q9C000 1473 aa10.53□□□□□ -0.72
HHLA3-201ENST00000359875 TNRQ92752 1358 aa10.52□□□□□ -0.72
HHLA3-201ENST00000359875 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
HHLA3-201ENST00000359875 DNMT1P26358 1616 aaKnown RBP10.52□□□□□ -0.73
HHLA3-201ENST00000359875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.73
HHLA3-201ENST00000359875 RNF17Q9BXT8 1623 aaKnown RBP10.51□□□□□ -0.73
HHLA3-201ENST00000359875 EIF2AK4Q9P2K8 1649 aaKnown RBP10.51□□□□□ -0.73
HHLA3-201ENST00000359875 ZC3H13Q5T200 1668 aaKnown RBP10.51□□□□□ -0.73
HHLA3-201ENST00000359875 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
HHLA3-201ENST00000359875 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
HHLA3-201ENST00000359875 CABP2Q9NPB3 220 aa10.5□□□□□ -0.73
HHLA3-201ENST00000359875 THEMISQ8N1K5 641 aaPredicted RBP10.49□□□□□ -0.73
HHLA3-201ENST00000359875 ZNF335Q9H4Z2 1342 aaPredicted RBP10.49□□□□□ -0.73
HHLA3-201ENST00000359875 SHANK2Q9UPX8 1470 aa10.49□□□□□ -0.73
HHLA3-201ENST00000359875 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
HHLA3-201ENST00000359875 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
HHLA3-201ENST00000359875 ABCC3O15438 1527 aa10.48□□□□□ -0.73
HHLA3-201ENST00000359875 CPS1P31327 1500 aa10.48□□□□□ -0.73
HHLA3-201ENST00000359875 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
HHLA3-201ENST00000359875 UGGT1Q9NYU2 1555 aa10.48□□□□□ -0.73
HHLA3-201ENST00000359875 POLR1AO95602 1720 aaPredicted RBP10.47□□□□□ -0.73
HHLA3-201ENST00000359875 LOC105371045A0A1W2PR82 267 aa10.47□□□□□ -0.73
HHLA3-201ENST00000359875 KANK4Q5T7N3 995 aaPredicted RBP10.47□□□□□ -0.73
HHLA3-201ENST00000359875 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
HHLA3-201ENST00000359875 ANKLE2Q86XL3 938 aa10.47□□□□□ -0.73
HHLA3-201ENST00000359875 SLAIN1Q8ND83 568 aa10.47□□□□□ -0.73
HHLA3-201ENST00000359875 SPATA31D1Q6ZQQ2 1576 aa10.47□□□□□ -0.73
HHLA3-201ENST00000359875 ERBINQ96RT1 1412 aa10.46□□□□□ -0.74
HHLA3-201ENST00000359875 MED14O60244 1454 aa10.46□□□□□ -0.74
HHLA3-201ENST00000359875 NEURL4Q96JN8 1562 aa10.46□□□□□ -0.74
HHLA3-201ENST00000359875 DEPDC5O75140 1603 aa10.46□□□□□ -0.74
HHLA3-201ENST00000359875 MROH1Q8NDA8 1641 aa10.44□□□□□ -0.74
HHLA3-201ENST00000359875 PRDM15P57071 1507 aaPredicted RBP10.44□□□□□ -0.74
HHLA3-201ENST00000359875 ERVK-7P63135 1459 aa10.44□□□□□ -0.74
HHLA3-201ENST00000359875 ARHGAP31Q2M1Z3 1444 aa10.44□□□□□ -0.74
HHLA3-201ENST00000359875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
HHLA3-201ENST00000359875 DISP3Q9P2K9 1392 aa10.44□□□□□ -0.74
HHLA3-201ENST00000359875 G3V3G9 751 aa10.44□□□□□ -0.74
HHLA3-201ENST00000359875 C3orf67Q6ZVT6 689 aa10.44□□□□□ -0.74
HHLA3-201ENST00000359875 NPHP4O75161 1426 aaPredicted RBP10.43□□□□□ -0.74
HHLA3-201ENST00000359875 KIF15Q9NS87 1388 aa10.43□□□□□ -0.74
HHLA3-201ENST00000359875 UBAP1LF5GYI3 381 aa10.43□□□□□ -0.74
HHLA3-201ENST00000359875 ABCC5O15440 1437 aa10.42□□□□□ -0.74
HHLA3-201ENST00000359875 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
HHLA3-201ENST00000359875 SNPHO15079 494 aa10.42□□□□□ -0.74
HHLA3-201ENST00000359875 PTPN23Q9H3S7 1636 aa10.42□□□□□ -0.74
HHLA3-201ENST00000359875 DAPK1P53355 1430 aa10.41□□□□□ -0.74
HHLA3-201ENST00000359875 FGD6Q6ZV73 1430 aa10.41□□□□□ -0.74
HHLA3-201ENST00000359875 SOX12O15370 315 aa10.41□□□□□ -0.74
HHLA3-201ENST00000359875 TOM1O60784 492 aa10.41□□□□□ -0.74
HHLA3-201ENST00000359875 ECM2O94769 699 aaPredicted RBP10.41□□□□□ -0.74
HHLA3-201ENST00000359875 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
HHLA3-201ENST00000359875 KANK1Q14678 1352 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms