RNA–Protein interactions for RNA: ENST00000358066.8

SEMA6D-204, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-204ENST00000358066 CPLX1O14810 134 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 ODF2Q5BJF6 829 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 REC8O95072 547 aa13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 ERICH2A1L162 156 aa13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 HSP90B2PQ58FF3 399 aa13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 CCDC43Q96MW1 224 aaKnown RBP13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 RRP7AQ9Y3A4 280 aaKnown RBP13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 RAB3GAP2Q9H2M9 1393 aa13.56□□□□□ -0.24
SEMA6D-204ENST00000358066 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 CCDC39Q9UFE4 941 aa13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 ERCC4Q92889 916 aaPredicted RBP13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 IFIT2P09913 472 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 RDXP35241 583 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 CRBNQ96SW2 442 aa13.55□□□□□ -0.24
SEMA6D-204ENST00000358066 E9PSI1 815 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 MYO6Q9UM54 1294 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 APPP05067 770 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 RNF20Q5VTR2 975 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 OLFM4Q6UX06 510 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 EPS15P42566 896 aa13.54□□□□□ -0.24
SEMA6D-204ENST00000358066 CUX2O14529 1486 aa13.53□□□□□ -0.24
SEMA6D-204ENST00000358066 FAM43AQ8N2R8 423 aa13.53□□□□□ -0.24
SEMA6D-204ENST00000358066 TRDNQ13061 729 aa13.53□□□□□ -0.24
SEMA6D-204ENST00000358066 FOSBP53539 338 aa13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 CCDC173Q0VFZ6 552 aa13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 CWC22Q9HCG8 908 aaKnown RBP13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 FMN1Q68DA7 1419 aa13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.24
SEMA6D-204ENST00000358066 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
SEMA6D-204ENST00000358066 CARMIL2Q6F5E8 1435 aa13.52□□□□□ -0.25
SEMA6D-204ENST00000358066 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
SEMA6D-204ENST00000358066 CCDC73Q6ZRK6 1079 aa13.51□□□□□ -0.25
SEMA6D-204ENST00000358066 H0YHG0 523 aa13.51□□□□□ -0.25
SEMA6D-204ENST00000358066 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
SEMA6D-204ENST00000358066 PDILTQ8N807 584 aa13.51□□□□□ -0.25
SEMA6D-204ENST00000358066 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
SEMA6D-204ENST00000358066 VPS37CA5D8V6 355 aaPredicted RBP13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 PLIN1O60240 522 aa13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 C9orf78Q9NZ63 289 aaPredicted RBP13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
SEMA6D-204ENST00000358066 NUCB2P80303 420 aa13.49□□□□□ -0.25
SEMA6D-204ENST00000358066 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
SEMA6D-204ENST00000358066 COG3Q96JB2 828 aa13.49□□□□□ -0.25
SEMA6D-204ENST00000358066 DDX19BQ9UMR2 479 aa13.49□□□□□ -0.25
SEMA6D-204ENST00000358066 MSH5O43196 834 aa13.48□□□□□ -0.25
SEMA6D-204ENST00000358066 LETM1O95202 739 aaPredicted RBP13.48□□□□□ -0.25
SEMA6D-204ENST00000358066 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
SEMA6D-204ENST00000358066 ZFYVE27Q5T4F4 411 aa13.48□□□□□ -0.25
SEMA6D-204ENST00000358066 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
SEMA6D-204ENST00000358066 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 EVA1CP58658 441 aa13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 R3HCC1Q9Y3T6 440 aaKnown RBP13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 CCP110O43303 1012 aa13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 EIF2S2P20042 333 aaKnown RBP13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 CCDC66A2RUB6 948 aa13.47□□□□□ -0.25
SEMA6D-204ENST00000358066 G3BP1Q13283 466 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEMA6D-204ENST00000358066 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.25
SEMA6D-204ENST00000358066 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
SEMA6D-204ENST00000358066 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
SEMA6D-204ENST00000358066 PANK3Q9H999 370 aa13.46□□□□□ -0.26
SEMA6D-204ENST00000358066 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 PLCD4Q9BRC7 762 aa13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 DDX58O95786 925 aaKnown RBP13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 ERC2O15083 957 aa13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 TEFQ10587 303 aa13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
SEMA6D-204ENST00000358066 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
SEMA6D-204ENST00000358066 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
SEMA6D-204ENST00000358066 OFD1O75665 1012 aa13.44□□□□□ -0.26
SEMA6D-204ENST00000358066 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
SEMA6D-204ENST00000358066 KIF3BO15066 747 aa13.43□□□□□ -0.26
SEMA6D-204ENST00000358066 XBP1P17861 261 aa13.43□□□□□ -0.26
SEMA6D-204ENST00000358066 TRAK1Q9UPV9 953 aa13.43□□□□□ -0.26
SEMA6D-204ENST00000358066 MAGEC2Q9UBF1 373 aaPredicted RBP13.43□□□□□ -0.26
SEMA6D-204ENST00000358066 SMC2O95347 1197 aa13.42□□□□□ -0.26
SEMA6D-204ENST00000358066 NASPP49321 788 aaPredicted RBP13.42□□□□□ -0.26
SEMA6D-204ENST00000358066 DZIP1LQ8IYY4 767 aaKnown RBP13.42□□□□□ -0.26
SEMA6D-204ENST00000358066 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
SEMA6D-204ENST00000358066 NUTM2FA1L443 756 aa13.42□□□□□ -0.26
SEMA6D-204ENST00000358066 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
SEMA6D-204ENST00000358066 ZBED9Q6R2W3 1325 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms