RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 LETM1O95202 739 aaPredicted RBP15.62■□□□□ 0.09
SMC4-202ENST00000357388 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
SMC4-202ENST00000357388 NGEFQ8N5V2 710 aa15.62■□□□□ 0.09
SMC4-202ENST00000357388 MYBBP1AQ9BQG0 1328 aaKnown RBP15.62■□□□□ 0.09
SMC4-202ENST00000357388 DHX8Q14562 1220 aaKnown RBP15.62■□□□□ 0.09
SMC4-202ENST00000357388 AAMPQ13685 434 aa15.61■□□□□ 0.09
SMC4-202ENST00000357388 SYNE3Q6ZMZ3 975 aa15.61■□□□□ 0.09
SMC4-202ENST00000357388 LTV1Q96GA3 475 aaPredicted RBP15.61■□□□□ 0.09
SMC4-202ENST00000357388 FMN1Q68DA7 1419 aa15.61■□□□□ 0.09
SMC4-202ENST00000357388 MSH5O43196 834 aa15.61■□□□□ 0.09
SMC4-202ENST00000357388 TRIM29Q14134 588 aa15.61■□□□□ 0.09
SMC4-202ENST00000357388 R3HCC1Q9Y3T6 440 aaKnown RBP15.61■□□□□ 0.09
SMC4-202ENST00000357388 E9PSI1 815 aa15.6■□□□□ 0.09
SMC4-202ENST00000357388 LEKR1Q6ZMV7 388 aa15.6■□□□□ 0.09
SMC4-202ENST00000357388 PCMTD1Q96MG8 357 aaPredicted RBP15.6■□□□□ 0.09
SMC4-202ENST00000357388 MYO6Q9UM54 1294 aa15.6■□□□□ 0.09
SMC4-202ENST00000357388 ZKSCAN1P17029 563 aaPredicted RBP15.6■□□□□ 0.09
SMC4-202ENST00000357388 TAF3Q5VWG9 929 aa15.6■□□□□ 0.09
SMC4-202ENST00000357388 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
SMC4-202ENST00000357388 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
SMC4-202ENST00000357388 CLUAP1Q96AJ1 413 aa15.59■□□□□ 0.09
SMC4-202ENST00000357388 NAT10Q9H0A0 1025 aaKnown RBP15.59■□□□□ 0.09
SMC4-202ENST00000357388 BICD2Q8TD16 824 aa15.58■□□□□ 0.09
SMC4-202ENST00000357388 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.09
SMC4-202ENST00000357388 NASPP49321 788 aaPredicted RBP15.58■□□□□ 0.08
SMC4-202ENST00000357388 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
SMC4-202ENST00000357388 SLC4A3P48751 1232 aa15.58■□□□□ 0.08
SMC4-202ENST00000357388 CCDC173Q0VFZ6 552 aa15.57■□□□□ 0.08
SMC4-202ENST00000357388 NEXNQ0ZGT2 675 aa15.57■□□□□ 0.08
SMC4-202ENST00000357388 USP8P40818 1118 aa15.57■□□□□ 0.08
SMC4-202ENST00000357388 ANKRD45Q5TZF3 282 aa15.57■□□□□ 0.08
SMC4-202ENST00000357388 TTC5Q8N0Z6 440 aa15.57■□□□□ 0.08
SMC4-202ENST00000357388 CCDC73Q6ZRK6 1079 aa15.56■□□□□ 0.08
SMC4-202ENST00000357388 TEFQ10587 303 aa15.56■□□□□ 0.08
SMC4-202ENST00000357388 RNF20Q5VTR2 975 aa15.56■□□□□ 0.08
SMC4-202ENST00000357388 MCTP1Q6DN14 999 aa15.56■□□□□ 0.08
SMC4-202ENST00000357388 RILPL2Q969X0 211 aa15.56■□□□□ 0.08
SMC4-202ENST00000357388 ZRSR2Q15696 482 aaKnown RBP15.55■□□□□ 0.08
SMC4-202ENST00000357388 ROCK1Q13464 1354 aa15.55■□□□□ 0.08
SMC4-202ENST00000357388 PODXL2Q9NZ53 605 aa15.55■□□□□ 0.08
SMC4-202ENST00000357388 DDX19BQ9UMR2 479 aa15.55■□□□□ 0.08
SMC4-202ENST00000357388 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
SMC4-202ENST00000357388 NFKBIBQ15653 356 aa15.54■□□□□ 0.08
SMC4-202ENST00000357388 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
SMC4-202ENST00000357388 COG3Q96JB2 828 aa15.54■□□□□ 0.08
SMC4-202ENST00000357388 RAB3GAP2Q9H2M9 1393 aa15.54■□□□□ 0.08
SMC4-202ENST00000357388 MBD3O95983 291 aa15.54■□□□□ 0.08
SMC4-202ENST00000357388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.086e-65■■■■■ 143.5
SMC4-202ENST00000357388 CAVIN1Q6NZI2 390 aaKnown RBP15.53■□□□□ 0.08
SMC4-202ENST00000357388 MEX3CQ5U5Q3 659 aaKnown RBP15.53■□□□□ 0.08
SMC4-202ENST00000357388 EXOC6Q8TAG9 804 aa15.53■□□□□ 0.08
SMC4-202ENST00000357388 CWC22Q9HCG8 908 aaKnown RBP15.53■□□□□ 0.08
SMC4-202ENST00000357388 RRP9O43818 475 aaKnown RBP15.53■□□□□ 0.08
SMC4-202ENST00000357388 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
SMC4-202ENST00000357388 CRBNQ96SW2 442 aa15.52■□□□□ 0.08
SMC4-202ENST00000357388 INTS3Q68E01 1043 aaKnown RBP15.52■□□□□ 0.08
SMC4-202ENST00000357388 SMC3Q9UQE7 1217 aa15.52■□□□□ 0.08
SMC4-202ENST00000357388 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
SMC4-202ENST00000357388 GOLGA6L7A0A1B0GV03 622 aa15.51■□□□□ 0.07
SMC4-202ENST00000357388 AEBP2Q6ZN18 517 aaPredicted RBP15.51■□□□□ 0.07
SMC4-202ENST00000357388 SOGA1O94964 1423 aa15.51■□□□□ 0.07
SMC4-202ENST00000357388 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
SMC4-202ENST00000357388 ANO8Q9HCE9 1232 aaPredicted RBP15.5■□□□□ 0.07
SMC4-202ENST00000357388 CPLX1O14810 134 aa15.5■□□□□ 0.07
SMC4-202ENST00000357388 FOXD1Q16676 465 aa15.5■□□□□ 0.07
SMC4-202ENST00000357388 ANO2Q9NQ90 1003 aa15.5■□□□□ 0.07
SMC4-202ENST00000357388 CCDC146Q8IYE0 955 aa15.5■□□□□ 0.07
SMC4-202ENST00000357388 KIF7Q2M1P5 1343 aa15.49■□□□□ 0.07
SMC4-202ENST00000357388 TSPYL1Q9H0U9 437 aa15.49■□□□□ 0.07
SMC4-202ENST00000357388 CAGE1Q8TC20 777 aa15.49■□□□□ 0.07
SMC4-202ENST00000357388 WASHC2AQ641Q2 1341 aa15.49■□□□□ 0.07
SMC4-202ENST00000357388 NUTM2FA1L443 756 aa15.49■□□□□ 0.07
SMC4-202ENST00000357388 KIAA0754O94854 1291 aa15.49■□□□□ 0.07
SMC4-202ENST00000357388 DDX58O95786 925 aaKnown RBP15.48■□□□□ 0.07
SMC4-202ENST00000357388 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
SMC4-202ENST00000357388 HNRNPMP52272 730 aaKnown RBP eCLIP15.47■□□□□ 0.072e-9■□□□□ 8.7
SMC4-202ENST00000357388 FOXD4L6Q3SYB3 417 aaPredicted RBP15.47■□□□□ 0.07
SMC4-202ENST00000357388 FOXD4L3Q6VB84 417 aaPredicted RBP15.47■□□□□ 0.07
SMC4-202ENST00000357388 EVC2Q86UK5 1308 aa15.47■□□□□ 0.07
SMC4-202ENST00000357388 RAD21O60216 631 aa15.47■□□□□ 0.07
SMC4-202ENST00000357388 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
SMC4-202ENST00000357388 CCDC43Q96MW1 224 aaKnown RBP15.47■□□□□ 0.07
SMC4-202ENST00000357388 API5Q9BZZ5 524 aaKnown RBP15.47■□□□□ 0.07
SMC4-202ENST00000357388 CCDC18Q5T9S5 1454 aa15.47■□□□□ 0.07
SMC4-202ENST00000357388 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
SMC4-202ENST00000357388 INCENPQ9NQS7 918 aa15.47■□□□□ 0.07
SMC4-202ENST00000357388 TRAK1Q9UPV9 953 aa15.47■□□□□ 0.07
SMC4-202ENST00000357388 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMC4-202ENST00000357388 C22orf23Q9BZE7 217 aa15.47■□□□□ 0.07
SMC4-202ENST00000357388 SMARCE1Q969G3 411 aa15.46■□□□□ 0.07
SMC4-202ENST00000357388 TSPY26PQ9H489 355 aa15.46■□□□□ 0.07
SMC4-202ENST00000357388 C9orf78Q9NZ63 289 aaPredicted RBP15.46■□□□□ 0.07
SMC4-202ENST00000357388 DHX16O60231 1041 aaKnown RBP15.46■□□□□ 0.07
SMC4-202ENST00000357388 EIF3JO75822 258 aaKnown RBP15.46■□□□□ 0.07
SMC4-202ENST00000357388 SAFBQ15424 915 aaKnown RBP eCLIP15.46■□□□□ 0.062e-9■■□□□ 11.5
SMC4-202ENST00000357388 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
SMC4-202ENST00000357388 TRAK2O60296 914 aa15.45■□□□□ 0.06
SMC4-202ENST00000357388 TRDNQ13061 729 aa15.45■□□□□ 0.06
SMC4-202ENST00000357388 PDCL2Q8N4E4 241 aa15.45■□□□□ 0.06
SMC4-202ENST00000357388 VPS37CA5D8V6 355 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms