RNA–Protein interactions for RNA: ENST00000357327.9

TNIK-203, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-203ENST00000357327 ERBB4Q15303 1308 aa11.95□□□□□ -0.5
TNIK-203ENST00000357327 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
TNIK-203ENST00000357327 XPCQ01831 940 aaPredicted RBP11.94□□□□□ -0.5
TNIK-203ENST00000357327 TAF3Q5VWG9 929 aa11.94□□□□□ -0.5
TNIK-203ENST00000357327 PPP2R1AP30153 589 aa11.94□□□□□ -0.5
TNIK-203ENST00000357327 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
TNIK-203ENST00000357327 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
TNIK-203ENST00000357327 BLMP54132 1417 aaPredicted RBP11.93□□□□□ -0.5
TNIK-203ENST00000357327 CCDC94Q9BW85 323 aaPredicted RBP11.93□□□□□ -0.5
TNIK-203ENST00000357327 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
TNIK-203ENST00000357327 NUCB2P80303 420 aa11.93□□□□□ -0.5
TNIK-203ENST00000357327 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
TNIK-203ENST00000357327 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
TNIK-203ENST00000357327 TCOF1Q13428 1488 aaKnown RBP11.92□□□□□ -0.5
TNIK-203ENST00000357327 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
TNIK-203ENST00000357327 CFAP44Q96MT7 982 aa11.92□□□□□ -0.5
TNIK-203ENST00000357327 CAVIN1Q6NZI2 390 aaKnown RBP11.92□□□□□ -0.5
TNIK-203ENST00000357327 DAPK1P53355 1430 aa11.92□□□□□ -0.5
TNIK-203ENST00000357327 PRDM4Q9UKN5 801 aa11.91□□□□□ -0.5
TNIK-203ENST00000357327 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
TNIK-203ENST00000357327 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
TNIK-203ENST00000357327 UTP14CQ5TAP6 766 aaKnown RBP11.91□□□□□ -0.5
TNIK-203ENST00000357327 SYAP1Q96A49 352 aaPredicted RBP11.91□□□□□ -0.5
TNIK-203ENST00000357327 ZNF771Q7L3S4 317 aaPredicted RBP11.91□□□□□ -0.5
TNIK-203ENST00000357327 NOL7Q9UMY1 257 aaKnown RBP11.91□□□□□ -0.5
TNIK-203ENST00000357327 KIF20AO95235 890 aa11.9□□□□□ -0.5
TNIK-203ENST00000357327 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.5
TNIK-203ENST00000357327 PLEKHD1A6NEE1 506 aa11.9□□□□□ -0.5
TNIK-203ENST00000357327 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
TNIK-203ENST00000357327 MCTP1Q6DN14 999 aa11.9□□□□□ -0.5
TNIK-203ENST00000357327 ZMYM3Q14202 1370 aa11.9□□□□□ -0.5
TNIK-203ENST00000357327 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
TNIK-203ENST00000357327 RIPK4P57078 832 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 GAS2L3Q86XJ1 694 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 ZKSCAN5Q9Y2L8 839 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 ZKSCAN2Q63HK3 967 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 SNX21Q969T3 373 aa11.89□□□□□ -0.51
TNIK-203ENST00000357327 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
TNIK-203ENST00000357327 GCC2Q8IWJ2 1684 aa11.88□□□□□ -0.51
TNIK-203ENST00000357327 K7ELQ4 463 aaPredicted RBP11.88□□□□□ -0.51
TNIK-203ENST00000357327 ZNF500O60304 480 aaPredicted RBP11.88□□□□□ -0.51
TNIK-203ENST00000357327 RAB3GAP1Q15042 981 aa11.88□□□□□ -0.51
TNIK-203ENST00000357327 SMC5Q8IY18 1101 aa11.88□□□□□ -0.51
TNIK-203ENST00000357327 ZNF644Q9H582 1327 aaPredicted RBP11.88□□□□□ -0.51
TNIK-203ENST00000357327 CBX1P83916 185 aa11.88□□□□□ -0.51
TNIK-203ENST00000357327 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
TNIK-203ENST00000357327 DMTNQ08495 405 aa11.87□□□□□ -0.51
TNIK-203ENST00000357327 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
TNIK-203ENST00000357327 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
TNIK-203ENST00000357327 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
TNIK-203ENST00000357327 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
TNIK-203ENST00000357327 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
TNIK-203ENST00000357327 POLR1AO95602 1720 aaPredicted RBP11.86□□□□□ -0.51
TNIK-203ENST00000357327 PHF14O94880 888 aa11.86□□□□□ -0.51
TNIK-203ENST00000357327 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
TNIK-203ENST00000357327 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
TNIK-203ENST00000357327 CASC1Q6TDU7 716 aa11.86□□□□□ -0.51
TNIK-203ENST00000357327 PRIMPOLQ96LW4 560 aa11.86□□□□□ -0.51
TNIK-203ENST00000357327 DIAPH3Q9NSV4 1193 aa11.86□□□□□ -0.51
TNIK-203ENST00000357327 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
TNIK-203ENST00000357327 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
TNIK-203ENST00000357327 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
TNIK-203ENST00000357327 ABCC5O15440 1437 aa11.85□□□□□ -0.51
TNIK-203ENST00000357327 IPO8O15397 1037 aaKnown RBP11.85□□□□□ -0.51
TNIK-203ENST00000357327 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
TNIK-203ENST00000357327 KIF14Q15058 1648 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
TNIK-203ENST00000357327 SSFA2P28290 1259 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
TNIK-203ENST00000357327 CCDC144AA2RUR9 1427 aa11.83□□□□□ -0.52
TNIK-203ENST00000357327 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
TNIK-203ENST00000357327 CCDC66A2RUB6 948 aa11.83□□□□□ -0.52
TNIK-203ENST00000357327 MBD3O95983 291 aa11.83□□□□□ -0.52
TNIK-203ENST00000357327 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
TNIK-203ENST00000357327 KDM5CP41229 1560 aa11.83□□□□□ -0.52
TNIK-203ENST00000357327 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
TNIK-203ENST00000357327 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
TNIK-203ENST00000357327 ST18O60284 1047 aa11.82□□□□□ -0.52
TNIK-203ENST00000357327 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
TNIK-203ENST00000357327 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
TNIK-203ENST00000357327 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
TNIK-203ENST00000357327 ZNF445P59923 1031 aa11.82□□□□□ -0.52
TNIK-203ENST00000357327 BCORL1Q5H9F3 1711 aa11.82□□□□□ -0.52
TNIK-203ENST00000357327 ZSCAN23Q3MJ62 389 aa11.82□□□□□ -0.52
TNIK-203ENST00000357327 RNF214Q8ND24 703 aa11.82□□□□□ -0.52
TNIK-203ENST00000357327 PDIA4P13667 645 aaKnown RBP11.81□□□□□ -0.52
TNIK-203ENST00000357327 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
TNIK-203ENST00000357327 CWC22Q9HCG8 908 aaKnown RBP11.81□□□□□ -0.52
TNIK-203ENST00000357327 IBTKQ9P2D0 1353 aaPredicted RBP11.8□□□□□ -0.52
TNIK-203ENST00000357327 NAP1L2Q9ULW6 460 aaPredicted RBP11.8□□□□□ -0.52
TNIK-203ENST00000357327 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
TNIK-203ENST00000357327 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
TNIK-203ENST00000357327 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
TNIK-203ENST00000357327 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms