RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 ADAMTS8Q9UP79 889 aa33.32■■■□□ 2.92
HDGF-201ENST00000357325 PPP2R1AP30153 589 aa33.31■■■□□ 2.92
HDGF-201ENST00000357325 PDE3BQ13370 1112 aa33.26■■■□□ 2.92
HDGF-201ENST00000357325 PPRC1Q5VV67 1664 aaKnown RBP33.25■■■□□ 2.91
HDGF-201ENST00000357325 MYOM1P52179 1685 aa33.25■■■□□ 2.91
HDGF-201ENST00000357325 STAC3Q96MF2 364 aa33.25■■■□□ 2.91
HDGF-201ENST00000357325 ABCA6Q8N139 1617 aa33.24■■■□□ 2.91
HDGF-201ENST00000357325 EFCAB6Q5THR3 1501 aa33.24■■■□□ 2.91
HDGF-201ENST00000357325 PLIN1O60240 522 aa33.24■■■□□ 2.91
HDGF-201ENST00000357325 MROH2AA6NES4 1674 aa33.23■■■□□ 2.91
HDGF-201ENST00000357325 SYNMO15061 1565 aa33.23■■■□□ 2.91
HDGF-201ENST00000357325 MAP3K4Q9Y6R4 1608 aa33.22■■■□□ 2.91
HDGF-201ENST00000357325 CHGAP10645 457 aaKnown RBP33.19■■■□□ 2.9
HDGF-201ENST00000357325 CDCA8Q53HL2 280 aa33.19■■■□□ 2.9
HDGF-201ENST00000357325 CFAP65Q6ZU64 1925 aaKnown RBP33.18■■■□□ 2.9
HDGF-201ENST00000357325 ZNF518AQ6AHZ1 1483 aa33.18■■■□□ 2.9
HDGF-201ENST00000357325 GGT6Q6P531 493 aa33.18■■■□□ 2.9
HDGF-201ENST00000357325 EIF3AQ14152 1382 aaKnown RBP33.17■■■□□ 2.9
HDGF-201ENST00000357325 KIF1BO60333 1816 aa33.17■■■□□ 2.9
HDGF-201ENST00000357325 NPM1P06748 294 aaKnown RBP eCLIP33.16■■■□□ 2.9
HDGF-201ENST00000357325 KIAA1210Q9ULL0 1709 aa33.16■■■□□ 2.9
HDGF-201ENST00000357325 ASXL1Q8IXJ9 1541 aa33.16■■■□□ 2.9
HDGF-201ENST00000357325 MYOM2P54296 1465 aa33.16■■■□□ 2.9
HDGF-201ENST00000357325 ERVK-7P63135 1459 aa33.16■■■□□ 2.9
HDGF-201ENST00000357325 INSRP06213 1382 aa33.15■■■□□ 2.9
HDGF-201ENST00000357325 PLEKHH1Q9ULM0 1364 aa33.15■■■□□ 2.9
HDGF-201ENST00000357325 ZMYM4Q5VZL5 1548 aa33.15■■■□□ 2.9
HDGF-201ENST00000357325 CD109Q6YHK3 1445 aa33.14■■■□□ 2.9
HDGF-201ENST00000357325 NOS1P29475 1434 aa33.13■■■□□ 2.89
HDGF-201ENST00000357325 NEURL4Q96JN8 1562 aa33.12■■■□□ 2.89
HDGF-201ENST00000357325 OSCARQ8IYS5 282 aa33.12■■■□□ 2.89
HDGF-201ENST00000357325 CARD14Q9BXL6 1004 aa33.12■■■□□ 2.89
HDGF-201ENST00000357325 IFT172Q9UG01 1749 aa33.12■■■□□ 2.89
HDGF-201ENST00000357325 FRMPD1Q5SYB0 1578 aa33.12■■■□□ 2.89
HDGF-201ENST00000357325 WDR43Q15061 677 aaKnown RBP eCLIP33.11■■■□□ 2.896e-7■□□□□ 10.3
HDGF-201ENST00000357325 KDM5AP29375 1690 aaKnown RBP33.11■■■□□ 2.89
HDGF-201ENST00000357325 NPATQ14207 1427 aa33.09■■■□□ 2.89
HDGF-201ENST00000357325 POGZQ7Z3K3 1410 aa33.09■■■□□ 2.89
HDGF-201ENST00000357325 CCDC146Q8IYE0 955 aa33.07■■■□□ 2.89
HDGF-201ENST00000357325 LMTK2Q8IWU2 1503 aa33.07■■■□□ 2.89
HDGF-201ENST00000357325 RAPGEF3O95398 923 aa33.05■■■□□ 2.88
HDGF-201ENST00000357325 NRXN1Q9ULB1 1477 aa33.05■■■□□ 2.88
HDGF-201ENST00000357325 TRAK1Q9UPV9 953 aa33.05■■■□□ 2.88
HDGF-201ENST00000357325 ADGRB3O60242 1522 aa33.04■■■□□ 2.88
HDGF-201ENST00000357325 C20orf194Q5TEA3 1177 aa33.04■■■□□ 2.88
HDGF-201ENST00000357325 TMEM132EQ6IEE7 984 aa33.03■■■□□ 2.88
HDGF-201ENST00000357325 CRBNQ96SW2 442 aa33.03■■■□□ 2.88
HDGF-201ENST00000357325 NUTM2DQ5VT03 806 aaPredicted RBP33.02■■■□□ 2.88
HDGF-201ENST00000357325 PIK3C2GO75747 1445 aa33.02■■■□□ 2.88
HDGF-201ENST00000357325 DUSP27Q5VZP5 1158 aa33■■■□□ 2.87
HDGF-201ENST00000357325 ZNF521Q96K83 1311 aa33■■■□□ 2.87
HDGF-201ENST00000357325 NPC1L1Q9UHC9 1359 aa32.99■■■□□ 2.87
HDGF-201ENST00000357325 SKAP1Q86WV1 359 aa32.99■■■□□ 2.87
HDGF-201ENST00000357325 MLH3Q9UHC1 1453 aa32.98■■■□□ 2.87
HDGF-201ENST00000357325 ERICH6Q7L0X2 663 aa32.98■■■□□ 2.87
HDGF-201ENST00000357325 HECW2Q9P2P5 1572 aa32.96■■■□□ 2.87
HDGF-201ENST00000357325 CENPJQ9HC77 1338 aaPredicted RBP32.96■■■□□ 2.87
HDGF-201ENST00000357325 SPINK5Q9NQ38 1064 aaPredicted RBP32.95■■■□□ 2.86
HDGF-201ENST00000357325 SENP3Q9H4L4 574 aaPredicted RBP32.94■■■□□ 2.86
HDGF-201ENST00000357325 APAF1O14727 1248 aa32.92■■■□□ 2.86
HDGF-201ENST00000357325 C14orf93Q9H972 538 aaKnown RBP32.92■■■□□ 2.86
HDGF-201ENST00000357325 PAK3O75914 559 aaPredicted RBP32.91■■■□□ 2.86
HDGF-201ENST00000357325 SLC12A5Q9H2X9 1139 aa32.91■■■□□ 2.86
HDGF-201ENST00000357325 MYO3AQ8NEV4 1616 aa32.91■■■□□ 2.86
HDGF-201ENST00000357325 ABCC3O15438 1527 aa32.91■■■□□ 2.86
HDGF-201ENST00000357325 PPLO60437 1756 aa32.91■■■□□ 2.86
HDGF-201ENST00000357325 GOLGA2Q08379 1002 aa32.91■■■□□ 2.86
HDGF-201ENST00000357325 SIGLEC1Q9BZZ2 1709 aa32.89■■■□□ 2.86
HDGF-201ENST00000357325 CFAP74Q9C0B2 1584 aa32.89■■■□□ 2.85
HDGF-201ENST00000357325 ADGRB1O14514 1584 aa32.88■■■□□ 2.85
HDGF-201ENST00000357325 TNNT2P45379 298 aaPredicted RBP32.88■■■□□ 2.85
HDGF-201ENST00000357325 DMRT2Q9Y5R5 561 aa32.87■■■□□ 2.85
HDGF-201ENST00000357325 SBNO2Q9Y2G9 1366 aa32.86■■■□□ 2.85
HDGF-201ENST00000357325 SLFN5Q08AF3 891 aa32.86■■■□□ 2.85
HDGF-201ENST00000357325 SETBP1Q9Y6X0 1596 aa32.86■■■□□ 2.85
HDGF-201ENST00000357325 NSD3Q9BZ95 1437 aa32.84■■■□□ 2.85
HDGF-201ENST00000357325 SLC24A1O60721 1099 aa32.83■■■□□ 2.85
HDGF-201ENST00000357325 QRICH2Q9H0J4 1663 aa32.82■■■□□ 2.84
HDGF-201ENST00000357325 NOP58Q9Y2X3 529 aaKnown RBP32.81■■■□□ 2.84
HDGF-201ENST00000357325 CAMSAP1Q5T5Y3 1602 aa32.81■■■□□ 2.84
HDGF-201ENST00000357325 ZC3H13Q5T200 1668 aaKnown RBP32.79■■■□□ 2.84
HDGF-201ENST00000357325 TCERG1O14776 1098 aaKnown RBP32.78■■■□□ 2.84
HDGF-201ENST00000357325 TRMT2AQ8IZ69 625 aaKnown RBP32.78■■■□□ 2.84
HDGF-201ENST00000357325 DIP2CQ9Y2E4 1556 aa32.77■■■□□ 2.84
HDGF-201ENST00000357325 PDE4AP27815 886 aa32.76■■■□□ 2.83
HDGF-201ENST00000357325 YEATS2Q9ULM3 1422 aa32.75■■■□□ 2.83
HDGF-201ENST00000357325 ANP32AP39687 249 aaKnown RBP32.75■■■□□ 2.83
HDGF-201ENST00000357325 SAFB2Q14151 953 aaKnown RBP eCLIP32.75■■■□□ 2.83
HDGF-201ENST00000357325 MORC1Q86VD1 984 aa32.75■■■□□ 2.83
HDGF-201ENST00000357325 IDI1Q13907 227 aa32.74■■■□□ 2.83
HDGF-201ENST00000357325 NPM2Q86SE8 214 aaKnown RBP32.74■■■□□ 2.83
HDGF-201ENST00000357325 RPGRIP1LQ68CZ1 1315 aa32.74■■■□□ 2.83
HDGF-201ENST00000357325 IPO9Q96P70 1041 aaKnown RBP32.73■■■□□ 2.83
HDGF-201ENST00000357325 NEO1Q92859 1461 aa32.73■■■□□ 2.83
HDGF-201ENST00000357325 BCAR3O75815 825 aa32.72■■■□□ 2.83
HDGF-201ENST00000357325 GLI2P10070 1586 aa32.71■■■□□ 2.83
HDGF-201ENST00000357325 NEXMIFQ5QGS0 1516 aa32.71■■■□□ 2.83
HDGF-201ENST00000357325 POLR3AO14802 1390 aaPredicted RBP32.7■■■□□ 2.83
HDGF-201ENST00000357325 PIK3C2BO00750 1634 aa32.7■■■□□ 2.83
HDGF-201ENST00000357325 BACH2Q9BYV9 841 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms