RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 CLTCL1P53675 1640 aa29.3■■■□□ 2.28
NKX2-4-201ENST00000351817 POGZQ7Z3K3 1410 aa29.27■■■□□ 2.28
NKX2-4-201ENST00000351817 KANK1Q14678 1352 aa29.27■■■□□ 2.28
NKX2-4-201ENST00000351817 SCAF11Q99590 1463 aaKnown RBP29.26■■■□□ 2.28
NKX2-4-201ENST00000351817 CDCA8Q53HL2 280 aa29.25■■■□□ 2.27
NKX2-4-201ENST00000351817 SYNMO15061 1565 aa29.23■■■□□ 2.27
NKX2-4-201ENST00000351817 EXOC6Q8TAG9 804 aa29.22■■■□□ 2.27
NKX2-4-201ENST00000351817 KIAA1210Q9ULL0 1709 aa29.22■■■□□ 2.27
NKX2-4-201ENST00000351817 NEURL4Q96JN8 1562 aa29.22■■■□□ 2.27
NKX2-4-201ENST00000351817 KNSTRNQ9Y448 316 aa29.21■■■□□ 2.27
NKX2-4-201ENST00000351817 MLH3Q9UHC1 1453 aa29.2■■■□□ 2.27
NKX2-4-201ENST00000351817 CDCA7LQ96GN5 454 aa29.2■■■□□ 2.27
NKX2-4-201ENST00000351817 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
NKX2-4-201ENST00000351817 FRMPD1Q5SYB0 1578 aa29.17■■■□□ 2.26
NKX2-4-201ENST00000351817 EIF3AQ14152 1382 aaKnown RBP29.17■■■□□ 2.26
NKX2-4-201ENST00000351817 NEO1Q92859 1461 aa29.17■■■□□ 2.26
NKX2-4-201ENST00000351817 EFCAB6Q5THR3 1501 aa29.15■■■□□ 2.26
NKX2-4-201ENST00000351817 PPP2R1AP30153 589 aa29.14■■■□□ 2.26
NKX2-4-201ENST00000351817 AMER1Q5JTC6 1135 aaPredicted RBP29.14■■■□□ 2.26
NKX2-4-201ENST00000351817 ASXL1Q8IXJ9 1541 aa29.13■■■□□ 2.25
NKX2-4-201ENST00000351817 PPRC1Q5VV67 1664 aaKnown RBP29.13■■■□□ 2.25
NKX2-4-201ENST00000351817 LMTK2Q8IWU2 1503 aa29.13■■■□□ 2.25
NKX2-4-201ENST00000351817 MYOM1P52179 1685 aa29.12■■■□□ 2.25
NKX2-4-201ENST00000351817 ABCA6Q8N139 1617 aa29.12■■■□□ 2.25
NKX2-4-201ENST00000351817 CYB5RLQ6IPT4 315 aa29.12■■■□□ 2.25
NKX2-4-201ENST00000351817 ADAMTS8Q9UP79 889 aa29.12■■■□□ 2.25
NKX2-4-201ENST00000351817 NOP58Q9Y2X3 529 aaKnown RBP29.1■■■□□ 2.25
NKX2-4-201ENST00000351817 MAP3K4Q9Y6R4 1608 aa29.1■■■□□ 2.25
NKX2-4-201ENST00000351817 KDM5AP29375 1690 aaKnown RBP29.1■■■□□ 2.25
NKX2-4-201ENST00000351817 NPC1L1Q9UHC9 1359 aa29.1■■■□□ 2.25
NKX2-4-201ENST00000351817 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
NKX2-4-201ENST00000351817 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
NKX2-4-201ENST00000351817 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
NKX2-4-201ENST00000351817 MYOM2P54296 1465 aa29.09■■■□□ 2.25
NKX2-4-201ENST00000351817 ANP32AP39687 249 aaKnown RBP29.09■■■□□ 2.25
NKX2-4-201ENST00000351817 UGGT1Q9NYU2 1555 aa29.09■■■□□ 2.25
NKX2-4-201ENST00000351817 WDR43Q15061 677 aaKnown RBP eCLIP29.08■■■□□ 2.25
NKX2-4-201ENST00000351817 PIK3C2GO75747 1445 aa29.08■■■□□ 2.25
NKX2-4-201ENST00000351817 KIF1BO60333 1816 aa29.07■■■□□ 2.24
NKX2-4-201ENST00000351817 TCERG1O14776 1098 aaKnown RBP29.07■■■□□ 2.24
NKX2-4-201ENST00000351817 SLC24A1O60721 1099 aa29.07■■■□□ 2.24
NKX2-4-201ENST00000351817 RAPGEF3O95398 923 aa29.07■■■□□ 2.24
NKX2-4-201ENST00000351817 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
NKX2-4-201ENST00000351817 IFT172Q9UG01 1749 aa29.03■■■□□ 2.24
NKX2-4-201ENST00000351817 GLI2P10070 1586 aa29.03■■■□□ 2.24
NKX2-4-201ENST00000351817 IPO9Q96P70 1041 aaKnown RBP29.02■■■□□ 2.24
NKX2-4-201ENST00000351817 PLIN1O60240 522 aa29■■■□□ 2.23
NKX2-4-201ENST00000351817 DIP2CQ9Y2E4 1556 aa28.99■■■□□ 2.23
NKX2-4-201ENST00000351817 PLEKHH1Q9ULM0 1364 aa28.99■■■□□ 2.23
NKX2-4-201ENST00000351817 CFAP70Q5T0N1 1121 aa28.98■■■□□ 2.23
NKX2-4-201ENST00000351817 GGT6Q6P531 493 aa28.98■■■□□ 2.23
NKX2-4-201ENST00000351817 MS4A1P11836 297 aa28.97■■■□□ 2.23
NKX2-4-201ENST00000351817 NPATQ14207 1427 aa28.97■■■□□ 2.23
NKX2-4-201ENST00000351817 MROH2AA6NES4 1674 aa28.97■■■□□ 2.23
NKX2-4-201ENST00000351817 ERVK-7P63135 1459 aa28.97■■■□□ 2.23
NKX2-4-201ENST00000351817 CRBNQ96SW2 442 aa28.97■■■□□ 2.23
NKX2-4-201ENST00000351817 ZNF521Q96K83 1311 aa28.97■■■□□ 2.23
NKX2-4-201ENST00000351817 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
NKX2-4-201ENST00000351817 ABCC3O15438 1527 aa28.95■■■□□ 2.22
NKX2-4-201ENST00000351817 PAK3O75914 559 aaPredicted RBP28.94■■■□□ 2.22
NKX2-4-201ENST00000351817 NRXN1Q9ULB1 1477 aa28.94■■■□□ 2.22
NKX2-4-201ENST00000351817 DUSP27Q5VZP5 1158 aa28.94■■■□□ 2.22
NKX2-4-201ENST00000351817 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
NKX2-4-201ENST00000351817 GOLGA2Q08379 1002 aa28.93■■■□□ 2.22
NKX2-4-201ENST00000351817 CFAP65Q6ZU64 1925 aaKnown RBP28.9■■■□□ 2.22
NKX2-4-201ENST00000351817 DIP2BQ9P265 1576 aa28.9■■■□□ 2.22
NKX2-4-201ENST00000351817 ADGRB3O60242 1522 aa28.9■■■□□ 2.22
NKX2-4-201ENST00000351817 PDE4AP27815 886 aa28.9■■■□□ 2.22
NKX2-4-201ENST00000351817 SBNO2Q9Y2G9 1366 aa28.9■■■□□ 2.22
NKX2-4-201ENST00000351817 ZBTB47Q9UFB7 747 aaPredicted RBP28.89■■■□□ 2.22
NKX2-4-201ENST00000351817 YEATS2Q9ULM3 1422 aa28.89■■■□□ 2.21
NKX2-4-201ENST00000351817 CAMSAP1Q5T5Y3 1602 aa28.88■■■□□ 2.21
NKX2-4-201ENST00000351817 SETBP1Q9Y6X0 1596 aa28.87■■■□□ 2.21
NKX2-4-201ENST00000351817 BACH2Q9BYV9 841 aa28.87■■■□□ 2.21
NKX2-4-201ENST00000351817 FAM69CQ0P6D2 419 aa28.85■■■□□ 2.21
NKX2-4-201ENST00000351817 SLFN5Q08AF3 891 aa28.85■■■□□ 2.21
NKX2-4-201ENST00000351817 SIGLEC1Q9BZZ2 1709 aa28.84■■■□□ 2.21
NKX2-4-201ENST00000351817 C20orf194Q5TEA3 1177 aa28.84■■■□□ 2.21
NKX2-4-201ENST00000351817 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.84■■■□□ 2.21
NKX2-4-201ENST00000351817 NOS1P29475 1434 aa28.83■■■□□ 2.21
NKX2-4-201ENST00000351817 CARD14Q9BXL6 1004 aa28.82■■■□□ 2.2
NKX2-4-201ENST00000351817 TRMT2AQ8IZ69 625 aaKnown RBP28.81■■■□□ 2.2
NKX2-4-201ENST00000351817 PPLO60437 1756 aa28.8■■■□□ 2.2
NKX2-4-201ENST00000351817 CCDC146Q8IYE0 955 aa28.79■■■□□ 2.2
NKX2-4-201ENST00000351817 CENPJQ9HC77 1338 aaPredicted RBP28.79■■■□□ 2.2
NKX2-4-201ENST00000351817 NGEFQ8N5V2 710 aa28.79■■■□□ 2.2
NKX2-4-201ENST00000351817 KDM2BQ8NHM5 1336 aa28.77■■■□□ 2.2
NKX2-4-201ENST00000351817 TSPOAP1O95153 1857 aa28.77■■■□□ 2.2
NKX2-4-201ENST00000351817 ZC3H13Q5T200 1668 aaKnown RBP28.77■■■□□ 2.2
NKX2-4-201ENST00000351817 APAF1O14727 1248 aa28.77■■■□□ 2.2
NKX2-4-201ENST00000351817 CHGAP10645 457 aaKnown RBP28.77■■■□□ 2.2
NKX2-4-201ENST00000351817 NPM2Q86SE8 214 aaKnown RBP28.75■■■□□ 2.19
NKX2-4-201ENST00000351817 PIK3C2BO00750 1634 aa28.75■■■□□ 2.19
NKX2-4-201ENST00000351817 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
NKX2-4-201ENST00000351817 CENPQQ7L2Z9 268 aaPredicted RBP28.74■■■□□ 2.19
NKX2-4-201ENST00000351817 ARHGAP31Q2M1Z3 1444 aa28.74■■■□□ 2.19
NKX2-4-201ENST00000351817 POLR3AO14802 1390 aaPredicted RBP28.74■■■□□ 2.19
NKX2-4-201ENST00000351817 C14orf93Q9H972 538 aaKnown RBP28.74■■■□□ 2.19
NKX2-4-201ENST00000351817 QRICH2Q9H0J4 1663 aa28.73■■■□□ 2.19
NKX2-4-201ENST00000351817 E9PSI1 815 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 286 ms