RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
TRAF3-202ENST00000351691 CYB5RLQ6IPT4 315 aa19.46■□□□□ 0.71
TRAF3-202ENST00000351691 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
TRAF3-202ENST00000351691 C8orf34Q49A92 452 aa19.45■□□□□ 0.7
TRAF3-202ENST00000351691 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
TRAF3-202ENST00000351691 COL17A1Q9UMD9 1497 aaPredicted RBP19.44■□□□□ 0.7
TRAF3-202ENST00000351691 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
TRAF3-202ENST00000351691 FRAT2O75474 233 aaPredicted RBP19.44■□□□□ 0.7
TRAF3-202ENST00000351691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRAF3-202ENST00000351691 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRAF3-202ENST00000351691 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
TRAF3-202ENST00000351691 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
TRAF3-202ENST00000351691 GLIPR1L2Q4G1C9 344 aa19.41■□□□□ 0.7
TRAF3-202ENST00000351691 STAC3Q96MF2 364 aa19.41■□□□□ 0.7
TRAF3-202ENST00000351691 RNF17Q9BXT8 1623 aaKnown RBP19.41■□□□□ 0.7
TRAF3-202ENST00000351691 L1TD1Q5T7N2 865 aaKnown RBP19.4■□□□□ 0.7
TRAF3-202ENST00000351691 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
TRAF3-202ENST00000351691 RGL3Q3MIN7 710 aa19.39■□□□□ 0.69
TRAF3-202ENST00000351691 PLIN1O60240 522 aa19.39■□□□□ 0.69
TRAF3-202ENST00000351691 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.69
TRAF3-202ENST00000351691 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
TRAF3-202ENST00000351691 DEPDC5O75140 1603 aa19.36■□□□□ 0.69
TRAF3-202ENST00000351691 TESK2Q96S53 571 aa19.36■□□□□ 0.69
TRAF3-202ENST00000351691 TRPM2O94759 1503 aa19.36■□□□□ 0.69
TRAF3-202ENST00000351691 PER1O15534 1290 aaPredicted RBP19.35■□□□□ 0.69
TRAF3-202ENST00000351691 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
TRAF3-202ENST00000351691 SPAG9O60271 1321 aaKnown RBP19.35■□□□□ 0.69
TRAF3-202ENST00000351691 SKAP1Q86WV1 359 aa19.35■□□□□ 0.69
TRAF3-202ENST00000351691 TMF1P82094 1093 aa19.34■□□□□ 0.69
TRAF3-202ENST00000351691 PKNOX2Q96KN3 472 aa19.34■□□□□ 0.69
TRAF3-202ENST00000351691 FANCAO15360 1455 aa19.34■□□□□ 0.69
TRAF3-202ENST00000351691 CEP152O94986 1710 aa19.33■□□□□ 0.69
TRAF3-202ENST00000351691 PTPRTO14522 1441 aa19.33■□□□□ 0.69
TRAF3-202ENST00000351691 NEURL4Q96JN8 1562 aa19.33■□□□□ 0.68
TRAF3-202ENST00000351691 MADDQ8WXG6 1647 aa19.32■□□□□ 0.68
TRAF3-202ENST00000351691 TET3O43151 1660 aa19.32■□□□□ 0.68
TRAF3-202ENST00000351691 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.32■□□□□ 0.68
TRAF3-202ENST00000351691 SPHKAPQ2M3C7 1700 aa19.32■□□□□ 0.68
TRAF3-202ENST00000351691 IQGAP1P46940 1657 aa19.31■□□□□ 0.68
TRAF3-202ENST00000351691 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
TRAF3-202ENST00000351691 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
TRAF3-202ENST00000351691 INO80Q9ULG1 1556 aaPredicted RBP19.3■□□□□ 0.68
TRAF3-202ENST00000351691 RRAGDQ9NQL2 400 aaPredicted RBP19.3■□□□□ 0.68
TRAF3-202ENST00000351691 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
TRAF3-202ENST00000351691 VWDEQ8N2E2 1590 aa19.3■□□□□ 0.68
TRAF3-202ENST00000351691 C20orf194Q5TEA3 1177 aa19.29■□□□□ 0.68
TRAF3-202ENST00000351691 KANK1Q14678 1352 aa19.28■□□□□ 0.68
TRAF3-202ENST00000351691 BECN1Q14457 450 aa19.28■□□□□ 0.68
TRAF3-202ENST00000351691 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
TRAF3-202ENST00000351691 KIAA1210Q9ULL0 1709 aa19.27■□□□□ 0.68
TRAF3-202ENST00000351691 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
TRAF3-202ENST00000351691 TSPOAP1O95153 1857 aa19.26■□□□□ 0.67
TRAF3-202ENST00000351691 POGKQ9P215 609 aa19.25■□□□□ 0.67
TRAF3-202ENST00000351691 CD109Q6YHK3 1445 aa19.25■□□□□ 0.67
TRAF3-202ENST00000351691 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
TRAF3-202ENST00000351691 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
TRAF3-202ENST00000351691 USP19O94966 1318 aa19.24■□□□□ 0.67
TRAF3-202ENST00000351691 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
TRAF3-202ENST00000351691 PANK3Q9H999 370 aa19.24■□□□□ 0.67
TRAF3-202ENST00000351691 MAP3K4Q9Y6R4 1608 aa19.24■□□□□ 0.67
TRAF3-202ENST00000351691 SCAF11Q99590 1463 aaKnown RBP19.24■□□□□ 0.67
TRAF3-202ENST00000351691 RRP9O43818 475 aaKnown RBP19.23■□□□□ 0.67
TRAF3-202ENST00000351691 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
TRAF3-202ENST00000351691 CLCN1P35523 988 aa19.23■□□□□ 0.67
TRAF3-202ENST00000351691 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
TRAF3-202ENST00000351691 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
TRAF3-202ENST00000351691 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
TRAF3-202ENST00000351691 SYNMO15061 1565 aa19.21■□□□□ 0.67
TRAF3-202ENST00000351691 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
TRAF3-202ENST00000351691 ZMYM3Q14202 1370 aa19.2■□□□□ 0.66
TRAF3-202ENST00000351691 FSD2A1L4K1 749 aa19.19■□□□□ 0.66
TRAF3-202ENST00000351691 ANTXR1Q9H6X2 564 aa19.19■□□□□ 0.66
TRAF3-202ENST00000351691 MAPK8IP3Q9UPT6 1336 aa19.19■□□□□ 0.66
TRAF3-202ENST00000351691 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
TRAF3-202ENST00000351691 PNNQ9H307 717 aaKnown RBP19.17■□□□□ 0.66
TRAF3-202ENST00000351691 MYOM2P54296 1465 aa19.17■□□□□ 0.66
TRAF3-202ENST00000351691 NLRP1Q9C000 1473 aa19.17■□□□□ 0.66
TRAF3-202ENST00000351691 RGS3P49796 1198 aa19.17■□□□□ 0.66
TRAF3-202ENST00000351691 MROH1Q8NDA8 1641 aa19.16■□□□□ 0.66
TRAF3-202ENST00000351691 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
TRAF3-202ENST00000351691 CC2D1BQ5T0F9 858 aaKnown RBP19.16■□□□□ 0.66
TRAF3-202ENST00000351691 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
TRAF3-202ENST00000351691 NPC1L1Q9UHC9 1359 aa19.16■□□□□ 0.66
TRAF3-202ENST00000351691 PLEKHH1Q9ULM0 1364 aa19.16■□□□□ 0.66
TRAF3-202ENST00000351691 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
TRAF3-202ENST00000351691 HSP90AA1P07900 732 aaKnown RBP19.15■□□□□ 0.66
TRAF3-202ENST00000351691 NINLQ9Y2I6 1382 aa19.15■□□□□ 0.66
TRAF3-202ENST00000351691 GLI2P10070 1586 aa19.15■□□□□ 0.66
TRAF3-202ENST00000351691 GOLGA6L3A6NEY3 463 aa19.15■□□□□ 0.66
TRAF3-202ENST00000351691 LMTK2Q8IWU2 1503 aa19.14■□□□□ 0.66
TRAF3-202ENST00000351691 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.65
TRAF3-202ENST00000351691 HSP90AA2PQ14568 343 aaPredicted RBP19.14■□□□□ 0.65
TRAF3-202ENST00000351691 SLFN5Q08AF3 891 aa19.13■□□□□ 0.65
TRAF3-202ENST00000351691 ADAMTS8Q9UP79 889 aa19.13■□□□□ 0.65
TRAF3-202ENST00000351691 KNSTRNQ9Y448 316 aa19.13■□□□□ 0.65
TRAF3-202ENST00000351691 KIF1BO60333 1816 aa19.13■□□□□ 0.65
TRAF3-202ENST00000351691 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.65
TRAF3-202ENST00000351691 EFCAB6Q5THR3 1501 aa19.12■□□□□ 0.65
TRAF3-202ENST00000351691 ASXL1Q8IXJ9 1541 aa19.12■□□□□ 0.65
TRAF3-202ENST00000351691 KIF3BO15066 747 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms