RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
TRIM4-201ENST00000349062 YEATS2Q9ULM3 1422 aa18.47■□□□□ 0.55
TRIM4-201ENST00000349062 GPRASP1Q5JY77 1395 aa18.46■□□□□ 0.55
TRIM4-201ENST00000349062 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
TRIM4-201ENST00000349062 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
TRIM4-201ENST00000349062 ESF1Q9H501 851 aaKnown RBP18.45■□□□□ 0.54
TRIM4-201ENST00000349062 CENPJQ9HC77 1338 aaPredicted RBP18.45■□□□□ 0.54
TRIM4-201ENST00000349062 COL17A1Q9UMD9 1497 aaPredicted RBP18.45■□□□□ 0.54
TRIM4-201ENST00000349062 MINK1Q8N4C8 1332 aaPredicted RBP18.45■□□□□ 0.54
TRIM4-201ENST00000349062 PRDM15P57071 1507 aaPredicted RBP18.45■□□□□ 0.54
TRIM4-201ENST00000349062 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
TRIM4-201ENST00000349062 NPATQ14207 1427 aa18.44■□□□□ 0.54
TRIM4-201ENST00000349062 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
TRIM4-201ENST00000349062 POGKQ9P215 609 aa18.43■□□□□ 0.54
TRIM4-201ENST00000349062 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
TRIM4-201ENST00000349062 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
TRIM4-201ENST00000349062 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
TRIM4-201ENST00000349062 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
TRIM4-201ENST00000349062 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
TRIM4-201ENST00000349062 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
TRIM4-201ENST00000349062 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
TRIM4-201ENST00000349062 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
TRIM4-201ENST00000349062 EXOC6Q8TAG9 804 aa18.41■□□□□ 0.54
TRIM4-201ENST00000349062 TRPM2O94759 1503 aa18.4■□□□□ 0.54
TRIM4-201ENST00000349062 KIDINS220Q9ULH0 1771 aa18.4■□□□□ 0.54
TRIM4-201ENST00000349062 PTPRTO14522 1441 aa18.4■□□□□ 0.54
TRIM4-201ENST00000349062 APAF1O14727 1248 aa18.39■□□□□ 0.54
TRIM4-201ENST00000349062 TSPOAP1O95153 1857 aa18.39■□□□□ 0.53
TRIM4-201ENST00000349062 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
TRIM4-201ENST00000349062 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
TRIM4-201ENST00000349062 POLR1AO95602 1720 aaPredicted RBP18.38■□□□□ 0.53
TRIM4-201ENST00000349062 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
TRIM4-201ENST00000349062 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
TRIM4-201ENST00000349062 CEP152O94986 1710 aa18.37■□□□□ 0.53
TRIM4-201ENST00000349062 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
TRIM4-201ENST00000349062 SKAP1Q86WV1 359 aa18.36■□□□□ 0.53
TRIM4-201ENST00000349062 ARAP3Q8WWN8 1544 aa18.35■□□□□ 0.53
TRIM4-201ENST00000349062 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
TRIM4-201ENST00000349062 TET3O43151 1660 aa18.34■□□□□ 0.53
TRIM4-201ENST00000349062 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
TRIM4-201ENST00000349062 C14orf93Q9H972 538 aaKnown RBP18.34■□□□□ 0.53
TRIM4-201ENST00000349062 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
TRIM4-201ENST00000349062 MADDQ8WXG6 1647 aa18.33■□□□□ 0.52
TRIM4-201ENST00000349062 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.52
TRIM4-201ENST00000349062 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
TRIM4-201ENST00000349062 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
TRIM4-201ENST00000349062 PPRC1Q5VV67 1664 aaKnown RBP18.32■□□□□ 0.52
TRIM4-201ENST00000349062 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
TRIM4-201ENST00000349062 FBLN1P23142 703 aa18.31■□□□□ 0.52
TRIM4-201ENST00000349062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM4-201ENST00000349062 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
TRIM4-201ENST00000349062 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
TRIM4-201ENST00000349062 STAC3Q96MF2 364 aa18.3■□□□□ 0.52
TRIM4-201ENST00000349062 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
TRIM4-201ENST00000349062 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
TRIM4-201ENST00000349062 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
TRIM4-201ENST00000349062 MROH1Q8NDA8 1641 aa18.29■□□□□ 0.52
TRIM4-201ENST00000349062 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
TRIM4-201ENST00000349062 MTHFSP49914 203 aa18.28■□□□□ 0.52
TRIM4-201ENST00000349062 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
TRIM4-201ENST00000349062 HECW2Q9P2P5 1572 aa18.28■□□□□ 0.52
TRIM4-201ENST00000349062 MLH3Q9UHC1 1453 aa18.27■□□□□ 0.52
TRIM4-201ENST00000349062 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.52
TRIM4-201ENST00000349062 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.51
TRIM4-201ENST00000349062 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.51
TRIM4-201ENST00000349062 ABCA6Q8N139 1617 aa18.26■□□□□ 0.51
TRIM4-201ENST00000349062 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
TRIM4-201ENST00000349062 EVC2Q86UK5 1308 aa18.26■□□□□ 0.51
TRIM4-201ENST00000349062 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
TRIM4-201ENST00000349062 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRIM4-201ENST00000349062 FRMPD1Q5SYB0 1578 aa18.26■□□□□ 0.51
TRIM4-201ENST00000349062 SOX12O15370 315 aa18.25■□□□□ 0.51
TRIM4-201ENST00000349062 KIF1BO60333 1816 aa18.25■□□□□ 0.51
TRIM4-201ENST00000349062 GOLGA2Q08379 1002 aa18.25■□□□□ 0.51
TRIM4-201ENST00000349062 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
TRIM4-201ENST00000349062 CANXP27824 592 aaKnown RBP18.24■□□□□ 0.51
TRIM4-201ENST00000349062 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
TRIM4-201ENST00000349062 BCL2L13Q9BXK5 485 aa18.24■□□□□ 0.51
TRIM4-201ENST00000349062 SLC52A1Q9NWF4 448 aa18.24■□□□□ 0.51
TRIM4-201ENST00000349062 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
TRIM4-201ENST00000349062 PLEKHH1Q9ULM0 1364 aa18.24■□□□□ 0.51
TRIM4-201ENST00000349062 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
TRIM4-201ENST00000349062 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
TRIM4-201ENST00000349062 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
TRIM4-201ENST00000349062 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
TRIM4-201ENST00000349062 ABCC3O15438 1527 aa18.23■□□□□ 0.51
TRIM4-201ENST00000349062 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
TRIM4-201ENST00000349062 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
TRIM4-201ENST00000349062 NEO1Q92859 1461 aa18.21■□□□□ 0.51
TRIM4-201ENST00000349062 MAP3K4Q9Y6R4 1608 aa18.21■□□□□ 0.5
TRIM4-201ENST00000349062 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
TRIM4-201ENST00000349062 NCKAP5LQ9HCH0 1330 aa18.2■□□□□ 0.5
TRIM4-201ENST00000349062 ASXL1Q8IXJ9 1541 aa18.2■□□□□ 0.5
TRIM4-201ENST00000349062 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
TRIM4-201ENST00000349062 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
TRIM4-201ENST00000349062 BCAR3O75815 825 aa18.19■□□□□ 0.5
TRIM4-201ENST00000349062 PAK3O75914 559 aaPredicted RBP18.19■□□□□ 0.5
TRIM4-201ENST00000349062 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
TRIM4-201ENST00000349062 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
TRIM4-201ENST00000349062 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms