RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 AMER1Q5JTC6 1135 aaPredicted RBP20.58■□□□□ 0.89
MBD1-204ENST00000347968 FOXD4L1Q9NU39 408 aa20.58■□□□□ 0.89
MBD1-204ENST00000347968 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.88
MBD1-204ENST00000347968 ABCC10Q5T3U5 1492 aa20.58■□□□□ 0.88
MBD1-204ENST00000347968 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
MBD1-204ENST00000347968 CHMP5Q9NZZ3 219 aa20.57■□□□□ 0.88
MBD1-204ENST00000347968 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
MBD1-204ENST00000347968 PANK1Q8TE04 598 aa20.57■□□□□ 0.88
MBD1-204ENST00000347968 PLEKHH1Q9ULM0 1364 aa20.57■□□□□ 0.88
MBD1-204ENST00000347968 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
MBD1-204ENST00000347968 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
MBD1-204ENST00000347968 UQCRHLA0A096LP55 91 aa20.56■□□□□ 0.88
MBD1-204ENST00000347968 UQCRHP07919 91 aa20.56■□□□□ 0.88
MBD1-204ENST00000347968 MSNP26038 577 aaKnown RBP20.56■□□□□ 0.88
MBD1-204ENST00000347968 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.56■□□□□ 0.88
MBD1-204ENST00000347968 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
MBD1-204ENST00000347968 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
MBD1-204ENST00000347968 MFAP1P55081 439 aaKnown RBP20.56■□□□□ 0.88
MBD1-204ENST00000347968 OFD1O75665 1012 aa20.55■□□□□ 0.88
MBD1-204ENST00000347968 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
MBD1-204ENST00000347968 CCDC146Q8IYE0 955 aa20.55■□□□□ 0.88
MBD1-204ENST00000347968 JARID2Q92833 1246 aaPredicted RBP20.55■□□□□ 0.88
MBD1-204ENST00000347968 SPINK5Q9NQ38 1064 aaPredicted RBP20.55■□□□□ 0.88
MBD1-204ENST00000347968 CDC42BPAQ5VT25 1732 aa20.55■□□□□ 0.88
MBD1-204ENST00000347968 ITSN2Q9NZM3 1697 aa20.54■□□□□ 0.88
MBD1-204ENST00000347968 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
MBD1-204ENST00000347968 ZSCAN30Q86W11 494 aa20.53■□□□□ 0.88
MBD1-204ENST00000347968 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
MBD1-204ENST00000347968 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
MBD1-204ENST00000347968 GTF2E1P29083 439 aaPredicted RBP20.51■□□□□ 0.87
MBD1-204ENST00000347968 ABCC2Q92887 1545 aa20.51■□□□□ 0.87
MBD1-204ENST00000347968 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
MBD1-204ENST00000347968 NASPP49321 788 aaPredicted RBP20.5■□□□□ 0.87
MBD1-204ENST00000347968 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.5■□□□□ 0.87
MBD1-204ENST00000347968 SMAP1Q8IYB5 467 aaPredicted RBP20.49■□□□□ 0.87
MBD1-204ENST00000347968 TSC1Q92574 1164 aa20.49■□□□□ 0.87
MBD1-204ENST00000347968 PARD3Q8TEW0 1356 aa20.49■□□□□ 0.87
MBD1-204ENST00000347968 DDX11L8A8MPP1 907 aa20.48■□□□□ 0.87
MBD1-204ENST00000347968 TSPY4P0CV99 314 aa20.47■□□□□ 0.87
MBD1-204ENST00000347968 TSPY10P0CW01 314 aa20.47■□□□□ 0.87
MBD1-204ENST00000347968 VGLL3A8MV65 326 aa20.47■□□□□ 0.87
MBD1-204ENST00000347968 TNPO1Q92973 898 aaKnown RBP20.47■□□□□ 0.87
MBD1-204ENST00000347968 PKD2Q13563 968 aa20.46■□□□□ 0.87
MBD1-204ENST00000347968 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
MBD1-204ENST00000347968 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
MBD1-204ENST00000347968 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
MBD1-204ENST00000347968 ANKRD30AQ9BXX3 1397 aa20.45■□□□□ 0.86
MBD1-204ENST00000347968 C9orf84Q5VXU9 1444 aa20.45■□□□□ 0.86
MBD1-204ENST00000347968 KDM5CP41229 1560 aa20.44■□□□□ 0.86
MBD1-204ENST00000347968 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
MBD1-204ENST00000347968 WDR43Q15061 677 aaKnown RBP eCLIP20.44■□□□□ 0.86
MBD1-204ENST00000347968 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
MBD1-204ENST00000347968 C22orf23Q9BZE7 217 aa20.44■□□□□ 0.86
MBD1-204ENST00000347968 NAP1L2Q9ULW6 460 aaPredicted RBP20.44■□□□□ 0.86
MBD1-204ENST00000347968 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
MBD1-204ENST00000347968 PDIA4P13667 645 aaKnown RBP20.44■□□□□ 0.86
MBD1-204ENST00000347968 STAC3Q96MF2 364 aa20.44■□□□□ 0.86
MBD1-204ENST00000347968 PANK3Q9H999 370 aa20.44■□□□□ 0.86
MBD1-204ENST00000347968 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
MBD1-204ENST00000347968 IGSF3O75054 1194 aa20.43■□□□□ 0.86
MBD1-204ENST00000347968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.86
MBD1-204ENST00000347968 CCDC173Q0VFZ6 552 aa20.43■□□□□ 0.86
MBD1-204ENST00000347968 DMRT2Q9Y5R5 561 aa20.43■□□□□ 0.86
MBD1-204ENST00000347968 BLMP54132 1417 aaPredicted RBP20.43■□□□□ 0.86
MBD1-204ENST00000347968 ARHGAP5Q13017 1502 aa20.43■□□□□ 0.86
MBD1-204ENST00000347968 CBX1P83916 185 aa20.42■□□□□ 0.86
MBD1-204ENST00000347968 FAM177BA6PVY3 158 aa20.42■□□□□ 0.86
MBD1-204ENST00000347968 HSCBQ8IWL3 235 aa20.42■□□□□ 0.86
MBD1-204ENST00000347968 ANP32BQ92688 251 aaKnown RBP20.42■□□□□ 0.86
MBD1-204ENST00000347968 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
MBD1-204ENST00000347968 CDC42BPBQ9Y5S2 1711 aa20.41■□□□□ 0.86
MBD1-204ENST00000347968 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
MBD1-204ENST00000347968 ZNF692Q9BU19 519 aaPredicted RBP20.41■□□□□ 0.86
MBD1-204ENST00000347968 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
MBD1-204ENST00000347968 SAMD9LQ8IVG5 1584 aa20.4■□□□□ 0.86
MBD1-204ENST00000347968 PLCD3Q8N3E9 789 aa20.4■□□□□ 0.86
MBD1-204ENST00000347968 BCL2L13Q9BXK5 485 aa20.4■□□□□ 0.86
MBD1-204ENST00000347968 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
MBD1-204ENST00000347968 NCLP19338 710 aaKnown RBP20.4■□□□□ 0.86
MBD1-204ENST00000347968 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
MBD1-204ENST00000347968 ANKRD50Q9ULJ7 1429 aa20.4■□□□□ 0.86
MBD1-204ENST00000347968 ZSCAN20P17040 1043 aaPredicted RBP20.4■□□□□ 0.86
MBD1-204ENST00000347968 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
MBD1-204ENST00000347968 EIF3AQ14152 1382 aaKnown RBP20.39■□□□□ 0.85
MBD1-204ENST00000347968 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.85
MBD1-204ENST00000347968 DMTNQ08495 405 aa20.38■□□□□ 0.85
MBD1-204ENST00000347968 MPNDQ8N594 471 aa20.38■□□□□ 0.85
MBD1-204ENST00000347968 MBD5Q9P267 1494 aa20.38■□□□□ 0.85
MBD1-204ENST00000347968 ZBTB22O15209 634 aa20.38■□□□□ 0.85
MBD1-204ENST00000347968 APAF1O14727 1248 aa20.38■□□□□ 0.85
MBD1-204ENST00000347968 SYCP2Q9BX26 1530 aa20.37■□□□□ 0.85
MBD1-204ENST00000347968 PPP4R3BQ5MIZ7 849 aa20.37■□□□□ 0.85
MBD1-204ENST00000347968 PPP1R9BQ96SB3 815 aa20.36■□□□□ 0.85
MBD1-204ENST00000347968 ADGBQ8N7X0 1667 aa20.36■□□□□ 0.85
MBD1-204ENST00000347968 PREX2Q70Z35 1606 aa20.36■□□□□ 0.85
MBD1-204ENST00000347968 PZPP20742 1482 aa20.36■□□□□ 0.85
MBD1-204ENST00000347968 NUP155O75694 1391 aa20.35■□□□□ 0.85
MBD1-204ENST00000347968 ADGRL2O95490 1459 aa20.35■□□□□ 0.85
MBD1-204ENST00000347968 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.35■□□□□ 0.85
MBD1-204ENST00000347968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms