RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 PTPRTO14522 1441 aa30.49■■■□□ 2.47
NKX2-3-201ENST00000344586 KNSTRNQ9Y448 316 aa30.49■■■□□ 2.47
NKX2-3-201ENST00000344586 DEPDC5O75140 1603 aa30.48■■■□□ 2.47
NKX2-3-201ENST00000344586 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
NKX2-3-201ENST00000344586 ASXL1Q8IXJ9 1541 aa30.47■■■□□ 2.47
NKX2-3-201ENST00000344586 UHRF1BP1LA0JNW5 1464 aa30.46■■■□□ 2.47
NKX2-3-201ENST00000344586 C20orf194Q5TEA3 1177 aa30.45■■■□□ 2.47
NKX2-3-201ENST00000344586 RTEL1-TNFRSF6BF6WH68 1400 aa30.45■■■□□ 2.46
NKX2-3-201ENST00000344586 ZNF521Q96K83 1311 aa30.44■■■□□ 2.46
NKX2-3-201ENST00000344586 WDR43Q15061 677 aaKnown RBP eCLIP30.44■■■□□ 2.46
NKX2-3-201ENST00000344586 PIK3C2GO75747 1445 aa30.44■■■□□ 2.46
NKX2-3-201ENST00000344586 RTL5Q5HYW3 569 aaPredicted RBP30.43■■■□□ 2.46
NKX2-3-201ENST00000344586 DUSP27Q5VZP5 1158 aa30.43■■■□□ 2.46
NKX2-3-201ENST00000344586 TET3O43151 1660 aa30.43■■■□□ 2.46
NKX2-3-201ENST00000344586 CDCA8Q53HL2 280 aa30.42■■■□□ 2.46
NKX2-3-201ENST00000344586 SKAP1Q86WV1 359 aa30.42■■■□□ 2.46
NKX2-3-201ENST00000344586 SPAG9O60271 1321 aaKnown RBP30.42■■■□□ 2.46
NKX2-3-201ENST00000344586 ARAP3Q8WWN8 1544 aa30.4■■■□□ 2.46
NKX2-3-201ENST00000344586 KDM2BQ8NHM5 1336 aa30.4■■■□□ 2.46
NKX2-3-201ENST00000344586 STAC3Q96MF2 364 aa30.4■■■□□ 2.46
NKX2-3-201ENST00000344586 KIAA1210Q9ULL0 1709 aa30.39■■■□□ 2.46
NKX2-3-201ENST00000344586 NPC1L1Q9UHC9 1359 aa30.39■■■□□ 2.45
NKX2-3-201ENST00000344586 VWDEQ8N2E2 1590 aa30.37■■■□□ 2.45
NKX2-3-201ENST00000344586 KDM5AP29375 1690 aaKnown RBP30.36■■■□□ 2.45
NKX2-3-201ENST00000344586 AFAP1Q8N556 730 aa30.35■■■□□ 2.45
NKX2-3-201ENST00000344586 EIF3AQ14152 1382 aaKnown RBP30.35■■■□□ 2.45
NKX2-3-201ENST00000344586 GOLGA2Q08379 1002 aa30.34■■■□□ 2.45
NKX2-3-201ENST00000344586 NEURL4Q96JN8 1562 aa30.34■■■□□ 2.45
NKX2-3-201ENST00000344586 INO80Q9ULG1 1556 aaPredicted RBP30.33■■■□□ 2.45
NKX2-3-201ENST00000344586 ATP7AQ04656 1500 aa30.3■■■□□ 2.44
NKX2-3-201ENST00000344586 CENPQQ7L2Z9 268 aaPredicted RBP30.29■■■□□ 2.44
NKX2-3-201ENST00000344586 SLFN5Q08AF3 891 aa30.29■■■□□ 2.44
NKX2-3-201ENST00000344586 ABCA6Q8N139 1617 aa30.28■■■□□ 2.44
NKX2-3-201ENST00000344586 LAS1LQ9Y4W2 734 aaKnown RBP30.27■■■□□ 2.44
NKX2-3-201ENST00000344586 MAP3K4Q9Y6R4 1608 aa30.27■■■□□ 2.44
NKX2-3-201ENST00000344586 MYOM2P54296 1465 aa30.26■■■□□ 2.44
NKX2-3-201ENST00000344586 TRMT2AQ8IZ69 625 aaKnown RBP30.26■■■□□ 2.43
NKX2-3-201ENST00000344586 ERVK-7P63135 1459 aa30.26■■■□□ 2.43
NKX2-3-201ENST00000344586 KANK1Q14678 1352 aa30.25■■■□□ 2.43
NKX2-3-201ENST00000344586 ABCA9Q8IUA7 1624 aa30.25■■■□□ 2.43
NKX2-3-201ENST00000344586 MROH1Q8NDA8 1641 aa30.25■■■□□ 2.43
NKX2-3-201ENST00000344586 CCDC146Q8IYE0 955 aa30.24■■■□□ 2.43
NKX2-3-201ENST00000344586 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.24■■■□□ 2.43
NKX2-3-201ENST00000344586 UGGT1Q9NYU2 1555 aa30.23■■■□□ 2.43
NKX2-3-201ENST00000344586 DDRGK1Q96HY6 314 aa30.23■■■□□ 2.43
NKX2-3-201ENST00000344586 NKTRP30414 1462 aaKnown RBP30.21■■■□□ 2.43
NKX2-3-201ENST00000344586 IFT172Q9UG01 1749 aa30.2■■■□□ 2.43
NKX2-3-201ENST00000344586 USP35Q9P2H5 1018 aa30.2■■■□□ 2.43
NKX2-3-201ENST00000344586 NEFMP07197 916 aa30.19■■■□□ 2.42
NKX2-3-201ENST00000344586 FANCAO15360 1455 aa30.19■■■□□ 2.42
NKX2-3-201ENST00000344586 SPINK5Q9NQ38 1064 aaPredicted RBP30.19■■■□□ 2.42
NKX2-3-201ENST00000344586 CFAP70Q5T0N1 1121 aa30.18■■■□□ 2.42
NKX2-3-201ENST00000344586 MYO3AQ8NEV4 1616 aa30.17■■■□□ 2.42
NKX2-3-201ENST00000344586 APAF1O14727 1248 aa30.16■■■□□ 2.42
NKX2-3-201ENST00000344586 PPM1GO15355 546 aaPredicted RBP30.16■■■□□ 2.42
NKX2-3-201ENST00000344586 MROH2AA6NES4 1674 aa30.15■■■□□ 2.42
NKX2-3-201ENST00000344586 KIF3BO15066 747 aa30.15■■■□□ 2.42
NKX2-3-201ENST00000344586 ADGRF5Q8IZF2 1346 aa30.15■■■□□ 2.42
NKX2-3-201ENST00000344586 EFCAB6Q5THR3 1501 aa30.15■■■□□ 2.42
NKX2-3-201ENST00000344586 CARD14Q9BXL6 1004 aa30.15■■■□□ 2.42
NKX2-3-201ENST00000344586 KIF1BO60333 1816 aa30.14■■■□□ 2.42
NKX2-3-201ENST00000344586 C8orf34Q49A92 452 aa30.13■■■□□ 2.41
NKX2-3-201ENST00000344586 FAM161AQ3B820 660 aa30.13■■■□□ 2.41
NKX2-3-201ENST00000344586 NRXN1Q9ULB1 1477 aa30.13■■■□□ 2.41
NKX2-3-201ENST00000344586 SLC24A1O60721 1099 aa30.11■■■□□ 2.41
NKX2-3-201ENST00000344586 E9PSI1 815 aa30.1■■■□□ 2.41
NKX2-3-201ENST00000344586 ADGRL1O94910 1474 aa30.1■■■□□ 2.41
NKX2-3-201ENST00000344586 PPRC1Q5VV67 1664 aaKnown RBP30.09■■■□□ 2.41
NKX2-3-201ENST00000344586 BCAR3O75815 825 aa30.08■■■□□ 2.41
NKX2-3-201ENST00000344586 DMRT2Q9Y5R5 561 aa30.08■■■□□ 2.41
NKX2-3-201ENST00000344586 SBNO2Q9Y2G9 1366 aa30.07■■■□□ 2.4
NKX2-3-201ENST00000344586 NGEFQ8N5V2 710 aa30.05■■■□□ 2.4
NKX2-3-201ENST00000344586 POLR3AO14802 1390 aaPredicted RBP30.04■■■□□ 2.4
NKX2-3-201ENST00000344586 ADGRB3O60242 1522 aa30.03■■■□□ 2.4
NKX2-3-201ENST00000344586 SHPRHQ149N8 1683 aa30.03■■■□□ 2.4
NKX2-3-201ENST00000344586 SETBP1Q9Y6X0 1596 aa30.03■■■□□ 2.4
NKX2-3-201ENST00000344586 LMTK2Q8IWU2 1503 aa30.02■■■□□ 2.4
NKX2-3-201ENST00000344586 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.39
NKX2-3-201ENST00000344586 KIDINS220Q9ULH0 1771 aa30■■■□□ 2.39
NKX2-3-201ENST00000344586 RGS3P49796 1198 aa30■■■□□ 2.39
NKX2-3-201ENST00000344586 SLC4A3P48751 1232 aa29.99■■■□□ 2.39
NKX2-3-201ENST00000344586 NOS1P29475 1434 aa29.98■■■□□ 2.39
NKX2-3-201ENST00000344586 NINLQ9Y2I6 1382 aa29.96■■■□□ 2.39
NKX2-3-201ENST00000344586 NSD3Q9BZ95 1437 aa29.96■■■□□ 2.39
NKX2-3-201ENST00000344586 CENPJQ9HC77 1338 aaPredicted RBP29.96■■■□□ 2.39
NKX2-3-201ENST00000344586 VIRMAQ69YN4 1812 aaKnown RBP29.96■■■□□ 2.39
NKX2-3-201ENST00000344586 WWC1Q8IX03 1113 aa29.95■■■□□ 2.39
NKX2-3-201ENST00000344586 QRICH2Q9H0J4 1663 aa29.95■■■□□ 2.38
NKX2-3-201ENST00000344586 PDE3AQ14432 1141 aa29.94■■■□□ 2.38
NKX2-3-201ENST00000344586 CGNL1Q0VF96 1302 aa29.94■■■□□ 2.38
NKX2-3-201ENST00000344586 IQSEC2Q5JU85 1478 aa29.94■■■□□ 2.38
NKX2-3-201ENST00000344586 IGHDP01880 384 aa29.94■■■□□ 2.38
NKX2-3-201ENST00000344586 NFKBIBQ15653 356 aa29.92■■■□□ 2.38
NKX2-3-201ENST00000344586 PPLO60437 1756 aa29.92■■■□□ 2.38
NKX2-3-201ENST00000344586 DAXXQ9UER7 740 aaPredicted RBP29.91■■■□□ 2.38
NKX2-3-201ENST00000344586 ADGRB1O14514 1584 aa29.91■■■□□ 2.38
NKX2-3-201ENST00000344586 USP32Q8NFA0 1604 aa29.91■■■□□ 2.38
NKX2-3-201ENST00000344586 ASXL2Q76L83 1435 aa29.87■■■□□ 2.37
NKX2-3-201ENST00000344586 MORC1Q86VD1 984 aa29.87■■■□□ 2.37
NKX2-3-201ENST00000344586 CLUAP1Q96AJ1 413 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms