RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 AAMPQ13685 434 aa13.62□□□□□ -0.23
RPL28-201ENST00000344063 VGFO15240 615 aaPredicted RBP13.62□□□□□ -0.23
RPL28-201ENST00000344063 MCCP23508 829 aa13.62□□□□□ -0.23
RPL28-201ENST00000344063 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
RPL28-201ENST00000344063 PPP2R1AP30153 589 aa13.6□□□□□ -0.23
RPL28-201ENST00000344063 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
RPL28-201ENST00000344063 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
RPL28-201ENST00000344063 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
RPL28-201ENST00000344063 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
RPL28-201ENST00000344063 DDX49Q9Y6V7 483 aaKnown RBP13.6□□□□□ -0.23
RPL28-201ENST00000344063 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
RPL28-201ENST00000344063 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
RPL28-201ENST00000344063 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
RPL28-201ENST00000344063 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
RPL28-201ENST00000344063 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
RPL28-201ENST00000344063 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
RPL28-201ENST00000344063 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
RPL28-201ENST00000344063 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
RPL28-201ENST00000344063 CAMSAP2Q08AD1 1489 aa13.57□□□□□ -0.24
RPL28-201ENST00000344063 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
RPL28-201ENST00000344063 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
RPL28-201ENST00000344063 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
RPL28-201ENST00000344063 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
RPL28-201ENST00000344063 A0A0U1RQG5 324 aaPredicted RBP13.56□□□□□ -0.24
RPL28-201ENST00000344063 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
RPL28-201ENST00000344063 FOXD4L6Q3SYB3 417 aaPredicted RBP13.56□□□□□ -0.24
RPL28-201ENST00000344063 FOXD4L3Q6VB84 417 aaPredicted RBP13.56□□□□□ -0.24
RPL28-201ENST00000344063 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
RPL28-201ENST00000344063 OS9Q13438 667 aaPredicted RBP13.55□□□□□ -0.24
RPL28-201ENST00000344063 MLECQ14165 292 aa13.55□□□□□ -0.24
RPL28-201ENST00000344063 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
RPL28-201ENST00000344063 A0A0G2JS52 829 aa13.55□□□□□ -0.24
RPL28-201ENST00000344063 CHMP5Q9NZZ3 219 aa13.55□□□□□ -0.24
RPL28-201ENST00000344063 CFAP43Q8NDM7 1665 aa13.55□□□□□ -0.24
RPL28-201ENST00000344063 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
RPL28-201ENST00000344063 SCAPERQ9BY12 1400 aa13.54□□□□□ -0.24
RPL28-201ENST00000344063 HMMRO75330 724 aa13.54□□□□□ -0.24
RPL28-201ENST00000344063 SOX12O15370 315 aa13.54□□□□□ -0.24
RPL28-201ENST00000344063 PDE3AQ14432 1141 aa13.54□□□□□ -0.24
RPL28-201ENST00000344063 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
RPL28-201ENST00000344063 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
RPL28-201ENST00000344063 TRAK2O60296 914 aa13.53□□□□□ -0.24
RPL28-201ENST00000344063 DRC7Q8IY82 874 aa13.53□□□□□ -0.24
RPL28-201ENST00000344063 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
RPL28-201ENST00000344063 KCNJ4P48050 445 aa13.51□□□□□ -0.25
RPL28-201ENST00000344063 UBE2Q2Q8WVN8 375 aa13.51□□□□□ -0.25
RPL28-201ENST00000344063 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
RPL28-201ENST00000344063 R3HCC1Q9Y3T6 440 aaKnown RBP13.51□□□□□ -0.25
RPL28-201ENST00000344063 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
RPL28-201ENST00000344063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPL28-201ENST00000344063 STK31Q9BXU1 1019 aa13.51□□□□□ -0.25
RPL28-201ENST00000344063 DIAPH1O60610 1272 aaKnown RBP13.5□□□□□ -0.25
RPL28-201ENST00000344063 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
RPL28-201ENST00000344063 MRE11P49959 708 aa13.5□□□□□ -0.25
RPL28-201ENST00000344063 KIF16BQ96L93 1317 aa13.5□□□□□ -0.25
RPL28-201ENST00000344063 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
RPL28-201ENST00000344063 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
RPL28-201ENST00000344063 TCP11L2Q8N4U5 519 aa13.5□□□□□ -0.25
RPL28-201ENST00000344063 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
RPL28-201ENST00000344063 ZRSR1Q15695 479 aaKnown RBP13.49□□□□□ -0.25
RPL28-201ENST00000344063 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
RPL28-201ENST00000344063 NINLQ9Y2I6 1382 aa13.49□□□□□ -0.25
RPL28-201ENST00000344063 RIPK4P57078 832 aa13.48□□□□□ -0.25
RPL28-201ENST00000344063 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
RPL28-201ENST00000344063 BCAR3O75815 825 aa13.48□□□□□ -0.25
RPL28-201ENST00000344063 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
RPL28-201ENST00000344063 ST18O60284 1047 aa13.48□□□□□ -0.25
RPL28-201ENST00000344063 MTHFSP49914 203 aa13.48□□□□□ -0.25
RPL28-201ENST00000344063 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
RPL28-201ENST00000344063 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
RPL28-201ENST00000344063 ARHGEF11O15085 1522 aa13.47□□□□□ -0.25
RPL28-201ENST00000344063 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
RPL28-201ENST00000344063 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
RPL28-201ENST00000344063 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
RPL28-201ENST00000344063 GOLGA6L4A6NEF3 574 aa13.47□□□□□ -0.25
RPL28-201ENST00000344063 SYAP1Q96A49 352 aaPredicted RBP13.47□□□□□ -0.25
RPL28-201ENST00000344063 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
RPL28-201ENST00000344063 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
RPL28-201ENST00000344063 API5Q9BZZ5 524 aaKnown RBP13.45□□□□□ -0.26
RPL28-201ENST00000344063 FGD1P98174 961 aa13.45□□□□□ -0.26
RPL28-201ENST00000344063 KIF14Q15058 1648 aa13.45□□□□□ -0.26
RPL28-201ENST00000344063 COG3Q96JB2 828 aa13.44□□□□□ -0.26
RPL28-201ENST00000344063 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
RPL28-201ENST00000344063 NASPP49321 788 aaPredicted RBP13.44□□□□□ -0.26
RPL28-201ENST00000344063 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
RPL28-201ENST00000344063 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
RPL28-201ENST00000344063 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
RPL28-201ENST00000344063 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.43□□□□□ -0.26
RPL28-201ENST00000344063 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
RPL28-201ENST00000344063 RNF214Q8ND24 703 aa13.43□□□□□ -0.26
RPL28-201ENST00000344063 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
RPL28-201ENST00000344063 GPATCH8Q9UKJ3 1502 aaKnown RBP13.42□□□□□ -0.26
RPL28-201ENST00000344063 ESPNB1AK53 854 aa13.42□□□□□ -0.26
RPL28-201ENST00000344063 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
RPL28-201ENST00000344063 TRIM6-TRIM34B2RNG4 842 aa13.42□□□□□ -0.26
RPL28-201ENST00000344063 GNAI1P63096 354 aa13.42□□□□□ -0.26
RPL28-201ENST00000344063 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
RPL28-201ENST00000344063 GGNBP2Q9H3C7 697 aa13.41□□□□□ -0.26
RPL28-201ENST00000344063 HDAC5Q9UQL6 1122 aa13.41□□□□□ -0.26
RPL28-201ENST00000344063 RALGAPBQ86X10 1494 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms