RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
SP140-201ENST00000343805 USP47Q96K76 1375 aa11.48□□□□□ -0.57
SP140-201ENST00000343805 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
SP140-201ENST00000343805 RGS22Q8NE09 1264 aa11.48□□□□□ -0.57
SP140-201ENST00000343805 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
SP140-201ENST00000343805 AKNAQ7Z591 1439 aa11.47□□□□□ -0.57
SP140-201ENST00000343805 GRIN2AQ12879 1464 aa11.47□□□□□ -0.57
SP140-201ENST00000343805 ROCK1Q13464 1354 aa11.47□□□□□ -0.57
SP140-201ENST00000343805 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
SP140-201ENST00000343805 KIAA0556O60303 1618 aa11.46□□□□□ -0.57
SP140-201ENST00000343805 HSP90B1P14625 803 aaKnown RBP11.46□□□□□ -0.57
SP140-201ENST00000343805 CHMP4BQ9H444 224 aaKnown RBP11.46□□□□□ -0.57
SP140-201ENST00000343805 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
SP140-201ENST00000343805 CAMSAP2Q08AD1 1489 aa11.46□□□□□ -0.57
SP140-201ENST00000343805 ST20-MTHFSA0A0A6YYL1 179 aa11.46□□□□□ -0.57
SP140-201ENST00000343805 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
SP140-201ENST00000343805 TROQ12816 1431 aaPredicted RBP11.46□□□□□ -0.58
SP140-201ENST00000343805 TEX14Q8IWB6 1497 aa11.46□□□□□ -0.58
SP140-201ENST00000343805 STAC3Q96MF2 364 aa11.46□□□□□ -0.58
SP140-201ENST00000343805 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
SP140-201ENST00000343805 RAPGEF6Q8TEU7 1601 aa11.44□□□□□ -0.58
SP140-201ENST00000343805 GPATCH8Q9UKJ3 1502 aaKnown RBP11.44□□□□□ -0.58
SP140-201ENST00000343805 ANKRD30AQ9BXX3 1397 aa11.44□□□□□ -0.58
SP140-201ENST00000343805 PZPP20742 1482 aa11.44□□□□□ -0.58
SP140-201ENST00000343805 ANKRD50Q9ULJ7 1429 aa11.44□□□□□ -0.58
SP140-201ENST00000343805 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
SP140-201ENST00000343805 CANXP27824 592 aaKnown RBP11.43□□□□□ -0.58
SP140-201ENST00000343805 DNMT1P26358 1616 aaKnown RBP11.43□□□□□ -0.58
SP140-201ENST00000343805 FTSJ3Q8IY81 847 aaKnown RBP11.43□□□□□ -0.58
SP140-201ENST00000343805 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
SP140-201ENST00000343805 KIF14Q15058 1648 aa11.43□□□□□ -0.58
SP140-201ENST00000343805 HSP90AA1P07900 732 aaKnown RBP11.42□□□□□ -0.58
SP140-201ENST00000343805 KIAA1107Q9UPP5 1409 aa11.42□□□□□ -0.58
SP140-201ENST00000343805 CARMIL2Q6F5E8 1435 aa11.4□□□□□ -0.58
SP140-201ENST00000343805 PPP1R37O75864 691 aa11.39□□□□□ -0.59
SP140-201ENST00000343805 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
SP140-201ENST00000343805 NEFMP07197 916 aa11.39□□□□□ -0.59
SP140-201ENST00000343805 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
SP140-201ENST00000343805 IPO9Q96P70 1041 aaKnown RBP11.39□□□□□ -0.59
SP140-201ENST00000343805 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
SP140-201ENST00000343805 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
SP140-201ENST00000343805 DHX29Q7Z478 1369 aaKnown RBP11.38□□□□□ -0.59
SP140-201ENST00000343805 CARNS1A5YM72 827 aa11.38□□□□□ -0.59
SP140-201ENST00000343805 MLLT3P42568 568 aaPredicted RBP11.38□□□□□ -0.59
SP140-201ENST00000343805 POLR1AO95602 1720 aaPredicted RBP11.37□□□□□ -0.59
SP140-201ENST00000343805 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
SP140-201ENST00000343805 PYGBP11216 843 aa11.37□□□□□ -0.59
SP140-201ENST00000343805 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
SP140-201ENST00000343805 IRF5Q13568 498 aa11.37□□□□□ -0.59
SP140-201ENST00000343805 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
SP140-201ENST00000343805 GZF1Q9H116 711 aaPredicted RBP11.37□□□□□ -0.59
SP140-201ENST00000343805 KIF15Q9NS87 1388 aa11.37□□□□□ -0.59
SP140-201ENST00000343805 C9orf84Q5VXU9 1444 aa11.37□□□□□ -0.59
SP140-201ENST00000343805 CDK11BP21127 795 aaKnown RBP11.36□□□□□ -0.59
SP140-201ENST00000343805 PNISRQ8TF01 805 aaKnown RBP11.36□□□□□ -0.59
SP140-201ENST00000343805 POM121Q96HA1 1249 aa11.36□□□□□ -0.59
SP140-201ENST00000343805 NUDCQ9Y266 331 aa11.36□□□□□ -0.59
SP140-201ENST00000343805 CHD1O14646 1710 aa11.36□□□□□ -0.59
SP140-201ENST00000343805 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
SP140-201ENST00000343805 ROCK2O75116 1388 aaKnown RBP11.36□□□□□ -0.59
SP140-201ENST00000343805 NUBP1P53384 320 aa11.36□□□□□ -0.59
SP140-201ENST00000343805 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
SP140-201ENST00000343805 GSE1Q14687 1217 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 SECISBP2LQ93073 1101 aaKnown RBP11.35□□□□□ -0.59
SP140-201ENST00000343805 BCORL1Q5H9F3 1711 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 RGS3P49796 1198 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 BARGINQ6ZT62 677 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 ATP10BO94823 1461 aa11.35□□□□□ -0.59
SP140-201ENST00000343805 PDCL3Q9H2J4 239 aa11.34□□□□□ -0.59
SP140-201ENST00000343805 RETREG2Q8NC44 543 aa11.34□□□□□ -0.59
SP140-201ENST00000343805 PDE4DQ08499 809 aa11.33□□□□□ -0.6
SP140-201ENST00000343805 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
SP140-201ENST00000343805 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
SP140-201ENST00000343805 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
SP140-201ENST00000343805 PTPRGP23470 1445 aa11.32□□□□□ -0.6
SP140-201ENST00000343805 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
SP140-201ENST00000343805 KRI1Q8N9T8 703 aaKnown RBP11.31□□□□□ -0.6
SP140-201ENST00000343805 TRIM66O15016 1216 aa11.3□□□□□ -0.6
SP140-201ENST00000343805 CDCA7LQ96GN5 454 aa11.3□□□□□ -0.6
SP140-201ENST00000343805 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
SP140-201ENST00000343805 CAPN15O75808 1086 aa11.29□□□□□ -0.6
SP140-201ENST00000343805 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
SP140-201ENST00000343805 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
SP140-201ENST00000343805 PLIN1O60240 522 aa11.28□□□□□ -0.6
SP140-201ENST00000343805 E2F4Q16254 413 aa11.28□□□□□ -0.6
SP140-201ENST00000343805 EXOC6Q8TAG9 804 aa11.28□□□□□ -0.6
SP140-201ENST00000343805 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
SP140-201ENST00000343805 SMG6Q86US8 1419 aaKnown RBP11.28□□□□□ -0.6
SP140-201ENST00000343805 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
SP140-201ENST00000343805 ANP32AP39687 249 aaKnown RBP11.28□□□□□ -0.6
SP140-201ENST00000343805 PANK3Q9H999 370 aa11.27□□□□□ -0.6
SP140-201ENST00000343805 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
SP140-201ENST00000343805 ADGBQ8N7X0 1667 aa11.26□□□□□ -0.61
SP140-201ENST00000343805 TRAK2O60296 914 aa11.26□□□□□ -0.61
SP140-201ENST00000343805 KDM5CP41229 1560 aa11.26□□□□□ -0.61
SP140-201ENST00000343805 NUP160Q12769 1436 aa11.26□□□□□ -0.61
SP140-201ENST00000343805 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
SP140-201ENST00000343805 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms