RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 FSD2A1L4K1 749 aa18.94■□□□□ 0.62
CLCN1-201ENST00000343257 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
CLCN1-201ENST00000343257 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
CLCN1-201ENST00000343257 TROQ12816 1431 aaPredicted RBP18.93■□□□□ 0.62
CLCN1-201ENST00000343257 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
CLCN1-201ENST00000343257 TNNT2P45379 298 aaPredicted RBP18.93■□□□□ 0.62
CLCN1-201ENST00000343257 AMER1Q5JTC6 1135 aaPredicted RBP18.92■□□□□ 0.62
CLCN1-201ENST00000343257 E9PSI1 815 aa18.91■□□□□ 0.62
CLCN1-201ENST00000343257 RLBP1P12271 317 aa18.91■□□□□ 0.62
CLCN1-201ENST00000343257 FBLN2P98095 1184 aa18.91■□□□□ 0.62
CLCN1-201ENST00000343257 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
CLCN1-201ENST00000343257 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
CLCN1-201ENST00000343257 ESPNB1AK53 854 aa18.91■□□□□ 0.62
CLCN1-201ENST00000343257 RRP9O43818 475 aaKnown RBP18.91■□□□□ 0.62
CLCN1-201ENST00000343257 GRPEL1Q9HAV7 217 aa18.91■□□□□ 0.62
CLCN1-201ENST00000343257 TRIM44Q96DX7 344 aaPredicted RBP18.9■□□□□ 0.62
CLCN1-201ENST00000343257 TRMT2AQ8IZ69 625 aaKnown RBP18.9■□□□□ 0.62
CLCN1-201ENST00000343257 MAGI2Q86UL8 1455 aa18.9■□□□□ 0.62
CLCN1-201ENST00000343257 PLB1Q6P1J6 1458 aa18.89■□□□□ 0.61
CLCN1-201ENST00000343257 MRE11P49959 708 aa18.89■□□□□ 0.61
CLCN1-201ENST00000343257 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
CLCN1-201ENST00000343257 CHMP5Q9NZZ3 219 aa18.88■□□□□ 0.61
CLCN1-201ENST00000343257 ADGRL2O95490 1459 aa18.88■□□□□ 0.61
CLCN1-201ENST00000343257 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
CLCN1-201ENST00000343257 NLRP1Q9C000 1473 aa18.87■□□□□ 0.61
CLCN1-201ENST00000343257 PDE3AQ14432 1141 aa18.87■□□□□ 0.61
CLCN1-201ENST00000343257 INSRP06213 1382 aa18.86■□□□□ 0.61
CLCN1-201ENST00000343257 KDM5DQ9BY66 1539 aa18.86■□□□□ 0.61
CLCN1-201ENST00000343257 ARID3AQ99856 593 aa18.85■□□□□ 0.61
CLCN1-201ENST00000343257 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
CLCN1-201ENST00000343257 GAS2L3Q86XJ1 694 aa18.85■□□□□ 0.61
CLCN1-201ENST00000343257 PMFBP1Q8TBY8 1022 aa18.84■□□□□ 0.61
CLCN1-201ENST00000343257 A2MP01023 1474 aa18.84■□□□□ 0.61
CLCN1-201ENST00000343257 CEP170Q5SW79 1584 aa18.83■□□□□ 0.61
CLCN1-201ENST00000343257 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
CLCN1-201ENST00000343257 DISP1Q96F81 1524 aa18.83■□□□□ 0.6
CLCN1-201ENST00000343257 RBM10P98175 930 aaKnown RBP18.82■□□□□ 0.6
CLCN1-201ENST00000343257 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
CLCN1-201ENST00000343257 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
CLCN1-201ENST00000343257 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
CLCN1-201ENST00000343257 RARSP54136 660 aaKnown RBP18.8■□□□□ 0.6
CLCN1-201ENST00000343257 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
CLCN1-201ENST00000343257 GPRASP1Q5JY77 1395 aa18.79■□□□□ 0.6
CLCN1-201ENST00000343257 WDR7Q9Y4E6 1490 aa18.78■□□□□ 0.6
CLCN1-201ENST00000343257 KIAA1211Q6ZU35 1233 aa18.77■□□□□ 0.6
CLCN1-201ENST00000343257 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
CLCN1-201ENST00000343257 TNPO1Q92973 898 aaKnown RBP18.76■□□□□ 0.59
CLCN1-201ENST00000343257 KIAA0556O60303 1618 aa18.76■□□□□ 0.59
CLCN1-201ENST00000343257 PLA2R1Q13018 1463 aa18.76■□□□□ 0.59
CLCN1-201ENST00000343257 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
CLCN1-201ENST00000343257 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
CLCN1-201ENST00000343257 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
CLCN1-201ENST00000343257 TCP11L2Q8N4U5 519 aa18.73■□□□□ 0.59
CLCN1-201ENST00000343257 ITSN2Q9NZM3 1697 aa18.73■□□□□ 0.59
CLCN1-201ENST00000343257 PRDM15P57071 1507 aaPredicted RBP18.72■□□□□ 0.59
CLCN1-201ENST00000343257 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
CLCN1-201ENST00000343257 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
CLCN1-201ENST00000343257 PTPRGP23470 1445 aa18.71■□□□□ 0.59
CLCN1-201ENST00000343257 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
CLCN1-201ENST00000343257 ZNF692Q9BU19 519 aaPredicted RBP18.71■□□□□ 0.59
CLCN1-201ENST00000343257 CARD14Q9BXL6 1004 aa18.71■□□□□ 0.59
CLCN1-201ENST00000343257 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
CLCN1-201ENST00000343257 CDCA8Q53HL2 280 aa18.71■□□□□ 0.58
CLCN1-201ENST00000343257 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.58
CLCN1-201ENST00000343257 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
CLCN1-201ENST00000343257 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
CLCN1-201ENST00000343257 FAM13BQ9NYF5 915 aa18.7■□□□□ 0.58
CLCN1-201ENST00000343257 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
CLCN1-201ENST00000343257 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
CLCN1-201ENST00000343257 VIRMAQ69YN4 1812 aaKnown RBP18.69■□□□□ 0.58
CLCN1-201ENST00000343257 TSR2Q969E8 191 aaKnown RBP18.69■□□□□ 0.58
CLCN1-201ENST00000343257 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
CLCN1-201ENST00000343257 PIK3C2GO75747 1445 aa18.68■□□□□ 0.58
CLCN1-201ENST00000343257 MVPQ14764 893 aaKnown RBP18.67■□□□□ 0.58
CLCN1-201ENST00000343257 LNPKQ9C0E8 428 aa18.67■□□□□ 0.58
CLCN1-201ENST00000343257 RBM42Q9BTD8 480 aaKnown RBP18.67■□□□□ 0.58
CLCN1-201ENST00000343257 R3HCC1Q9Y3T6 440 aaKnown RBP18.67■□□□□ 0.58
CLCN1-201ENST00000343257 TPM2P07951 284 aa18.67■□□□□ 0.58
CLCN1-201ENST00000343257 GBP4Q96PP9 640 aa18.66■□□□□ 0.58
CLCN1-201ENST00000343257 ADCY10Q96PN6 1610 aa18.66■□□□□ 0.58
CLCN1-201ENST00000343257 NASPP49321 788 aaPredicted RBP18.66■□□□□ 0.58
CLCN1-201ENST00000343257 DZIP1LQ8IYY4 767 aaKnown RBP18.66■□□□□ 0.58
CLCN1-201ENST00000343257 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
CLCN1-201ENST00000343257 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
CLCN1-201ENST00000343257 PDCL3Q9H2J4 239 aa18.65■□□□□ 0.58
CLCN1-201ENST00000343257 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
CLCN1-201ENST00000343257 SSFA2P28290 1259 aa18.65■□□□□ 0.58
CLCN1-201ENST00000343257 MSNP26038 577 aaKnown RBP18.65■□□□□ 0.58
CLCN1-201ENST00000343257 JPH4Q96JJ6 628 aa18.65■□□□□ 0.58
CLCN1-201ENST00000343257 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
CLCN1-201ENST00000343257 ZKSCAN2Q63HK3 967 aa18.64■□□□□ 0.57
CLCN1-201ENST00000343257 RTEL1-TNFRSF6BF6WH68 1400 aa18.63■□□□□ 0.57
CLCN1-201ENST00000343257 ANP32BQ92688 251 aaKnown RBP18.63■□□□□ 0.57
CLCN1-201ENST00000343257 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
CLCN1-201ENST00000343257 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
CLCN1-201ENST00000343257 NINLQ9Y2I6 1382 aa18.63■□□□□ 0.57
CLCN1-201ENST00000343257 CFAP70Q5T0N1 1121 aa18.61■□□□□ 0.57
CLCN1-201ENST00000343257 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
CLCN1-201ENST00000343257 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
CLCN1-201ENST00000343257 CLASP1Q7Z460 1538 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms