RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 PRM3Q9NNZ6 103 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 MARCH6O60337 910 aa13.18□□□□□ -0.3
CCDC18-201ENST00000343253 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
CCDC18-201ENST00000343253 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
CCDC18-201ENST00000343253 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
CCDC18-201ENST00000343253 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
CCDC18-201ENST00000343253 LETM1O95202 739 aaPredicted RBP13.17□□□□□ -0.3
CCDC18-201ENST00000343253 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC18-201ENST00000343253 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
CCDC18-201ENST00000343253 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
CCDC18-201ENST00000343253 NAT10Q9H0A0 1025 aaKnown RBP13.16□□□□□ -0.3
CCDC18-201ENST00000343253 CCP110O43303 1012 aa13.16□□□□□ -0.3
CCDC18-201ENST00000343253 USP8P40818 1118 aa13.16□□□□□ -0.3
CCDC18-201ENST00000343253 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
CCDC18-201ENST00000343253 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
CCDC18-201ENST00000343253 PCMTD1Q96MG8 357 aaPredicted RBP13.16□□□□□ -0.3
CCDC18-201ENST00000343253 TRIM29Q14134 588 aa13.15□□□□□ -0.3
CCDC18-201ENST00000343253 FOXD1Q16676 465 aa13.15□□□□□ -0.3
CCDC18-201ENST00000343253 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
CCDC18-201ENST00000343253 INTS3Q68E01 1043 aaKnown RBP13.15□□□□□ -0.3
CCDC18-201ENST00000343253 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
CCDC18-201ENST00000343253 DHX57Q6P158 1386 aaKnown RBP13.15□□□□□ -0.3
CCDC18-201ENST00000343253 VPS37CA5D8V6 355 aaPredicted RBP13.14□□□□□ -0.31
CCDC18-201ENST00000343253 WIZO95785 1651 aa13.14□□□□□ -0.31
CCDC18-201ENST00000343253 NUP155O75694 1391 aa13.13□□□□□ -0.31
CCDC18-201ENST00000343253 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
CCDC18-201ENST00000343253 CPLX1O14810 134 aa13.13□□□□□ -0.31
CCDC18-201ENST00000343253 TSPYL1Q9H0U9 437 aa13.13□□□□□ -0.31
CCDC18-201ENST00000343253 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
CCDC18-201ENST00000343253 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
CCDC18-201ENST00000343253 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
CCDC18-201ENST00000343253 RUSC2Q8N2Y8 1516 aa13.12□□□□□ -0.31
CCDC18-201ENST00000343253 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
CCDC18-201ENST00000343253 DZIP1LQ8IYY4 767 aaKnown RBP13.12□□□□□ -0.31
CCDC18-201ENST00000343253 ESPNB1AK53 854 aa13.12□□□□□ -0.31
CCDC18-201ENST00000343253 FRAT2O75474 233 aaPredicted RBP13.12□□□□□ -0.31
CCDC18-201ENST00000343253 TRIM5Q9C035 493 aa13.12□□□□□ -0.31
CCDC18-201ENST00000343253 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
CCDC18-201ENST00000343253 API5Q9BZZ5 524 aaKnown RBP13.12□□□□□ -0.31
CCDC18-201ENST00000343253 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
CCDC18-201ENST00000343253 CUX2O14529 1486 aa13.1□□□□□ -0.31
CCDC18-201ENST00000343253 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
CCDC18-201ENST00000343253 STK26Q9P289 416 aa13.1□□□□□ -0.31
CCDC18-201ENST00000343253 ANKRD30AQ9BXX3 1397 aa13.1□□□□□ -0.31
CCDC18-201ENST00000343253 TSPY26PQ9H489 355 aa13.1□□□□□ -0.31
CCDC18-201ENST00000343253 CCDC112Q8NEF3 446 aa13.09□□□□□ -0.31
CCDC18-201ENST00000343253 ROCK1Q13464 1354 aa13.09□□□□□ -0.31
CCDC18-201ENST00000343253 MCM2P49736 904 aa13.09□□□□□ -0.31
CCDC18-201ENST00000343253 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
CCDC18-201ENST00000343253 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
CCDC18-201ENST00000343253 HSP90AB3PQ58FF7 597 aa13.09□□□□□ -0.31
CCDC18-201ENST00000343253 KIAA0754O94854 1291 aa13.08□□□□□ -0.31
CCDC18-201ENST00000343253 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
CCDC18-201ENST00000343253 ZNF330Q9Y3S2 320 aaPredicted RBP13.08□□□□□ -0.32
CCDC18-201ENST00000343253 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.08□□□□□ -0.32
CCDC18-201ENST00000343253 AXDND1Q5T1B0 1012 aaPredicted RBP13.08□□□□□ -0.32
CCDC18-201ENST00000343253 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
CCDC18-201ENST00000343253 APAF1O14727 1248 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 OLFM4Q6UX06 510 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 PANK3Q9H999 370 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 ST20-MTHFSA0A0A6YYL1 179 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 GRPEL1Q9HAV7 217 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 CDC45O75419 566 aa13.07□□□□□ -0.32
CCDC18-201ENST00000343253 EIF3JO75822 258 aaKnown RBP13.07□□□□□ -0.32
CCDC18-201ENST00000343253 CT47B1P0C2W7 299 aaPredicted RBP13.06□□□□□ -0.32
CCDC18-201ENST00000343253 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CCDC18-201ENST00000343253 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
CCDC18-201ENST00000343253 UQCRHP07919 91 aa13.06□□□□□ -0.32
CCDC18-201ENST00000343253 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
CCDC18-201ENST00000343253 PDCP20941 246 aa13.06□□□□□ -0.32
CCDC18-201ENST00000343253 ERLIN1O75477 346 aa13.06□□□□□ -0.32
CCDC18-201ENST00000343253 TRDNQ13061 729 aa13.06□□□□□ -0.32
CCDC18-201ENST00000343253 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCDC18-201ENST00000343253 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
CCDC18-201ENST00000343253 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
CCDC18-201ENST00000343253 HSP90AB4PQ58FF6 505 aa13.04□□□□□ -0.32
CCDC18-201ENST00000343253 VPS53Q5VIR6 699 aa13.04□□□□□ -0.32
CCDC18-201ENST00000343253 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
CCDC18-201ENST00000343253 OFD1O75665 1012 aa13.04□□□□□ -0.32
CCDC18-201ENST00000343253 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
CCDC18-201ENST00000343253 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
CCDC18-201ENST00000343253 PDILTQ8N807 584 aa13.04□□□□□ -0.32
CCDC18-201ENST00000343253 RABEP1Q15276 862 aa13.03□□□□□ -0.32
CCDC18-201ENST00000343253 SMARCE1Q969G3 411 aa13.03□□□□□ -0.32
CCDC18-201ENST00000343253 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
CCDC18-201ENST00000343253 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
CCDC18-201ENST00000343253 TMX4Q9H1E5 349 aaPredicted RBP13.03□□□□□ -0.32
CCDC18-201ENST00000343253 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
CCDC18-201ENST00000343253 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.32
CCDC18-201ENST00000343253 CWC22Q9HCG8 908 aaKnown RBP13.02□□□□□ -0.32
CCDC18-201ENST00000343253 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.32
CCDC18-201ENST00000343253 ERC2O15083 957 aa13.02□□□□□ -0.33
CCDC18-201ENST00000343253 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.33
CCDC18-201ENST00000343253 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
CCDC18-201ENST00000343253 FILIP1LQ4L180 1135 aa13.01□□□□□ -0.33
CCDC18-201ENST00000343253 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms