RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 FBXO31Q5XUX0 539 aaPredicted RBP24.12■■□□□ 1.45
FRMD4A-202ENST00000342409 NEXMIFQ5QGS0 1516 aa24.1■■□□□ 1.45
FRMD4A-202ENST00000342409 ADGRF5Q8IZF2 1346 aa24.09■■□□□ 1.45
FRMD4A-202ENST00000342409 IDI1Q13907 227 aa24.09■■□□□ 1.45
FRMD4A-202ENST00000342409 KIF7Q2M1P5 1343 aa24.07■■□□□ 1.44
FRMD4A-202ENST00000342409 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
FRMD4A-202ENST00000342409 SLC52A1Q9NWF4 448 aa24.06■■□□□ 1.44
FRMD4A-202ENST00000342409 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
FRMD4A-202ENST00000342409 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
FRMD4A-202ENST00000342409 ARID4BQ4LE39 1312 aaPredicted RBP24.03■■□□□ 1.44
FRMD4A-202ENST00000342409 FER1L4A9Z1Z3 1794 aa24.02■■□□□ 1.44
FRMD4A-202ENST00000342409 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
FRMD4A-202ENST00000342409 PIK3C2GO75747 1445 aa24.01■■□□□ 1.43
FRMD4A-202ENST00000342409 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
FRMD4A-202ENST00000342409 CFAP70Q5T0N1 1121 aa23.98■■□□□ 1.43
FRMD4A-202ENST00000342409 C3P01024 1663 aa23.98■■□□□ 1.43
FRMD4A-202ENST00000342409 SCAF11Q99590 1463 aaKnown RBP23.97■■□□□ 1.43
FRMD4A-202ENST00000342409 TESK2Q96S53 571 aa23.96■■□□□ 1.43
FRMD4A-202ENST00000342409 ADGRB1O14514 1584 aa23.95■■□□□ 1.42
FRMD4A-202ENST00000342409 ZFYVE9O95405 1425 aa23.95■■□□□ 1.42
FRMD4A-202ENST00000342409 A2ML1A8K2U0 1454 aa23.94■■□□□ 1.42
FRMD4A-202ENST00000342409 ESF1Q9H501 851 aaKnown RBP23.93■■□□□ 1.42
FRMD4A-202ENST00000342409 MYO3AQ8NEV4 1616 aa23.92■■□□□ 1.42
FRMD4A-202ENST00000342409 KDM5AP29375 1690 aaKnown RBP23.91■■□□□ 1.42
FRMD4A-202ENST00000342409 C14orf93Q9H972 538 aaKnown RBP23.91■■□□□ 1.42
FRMD4A-202ENST00000342409 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
FRMD4A-202ENST00000342409 UBR1Q8IWV7 1749 aa23.9■■□□□ 1.42
FRMD4A-202ENST00000342409 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.41
FRMD4A-202ENST00000342409 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
FRMD4A-202ENST00000342409 ASXL1Q8IXJ9 1541 aa23.87■■□□□ 1.41
FRMD4A-202ENST00000342409 TNRQ92752 1358 aa23.87■■□□□ 1.41
FRMD4A-202ENST00000342409 SETD1AO15047 1707 aaKnown RBP23.85■■□□□ 1.41
FRMD4A-202ENST00000342409 ARHGEF28Q8N1W1 1705 aaKnown RBP23.85■■□□□ 1.41
FRMD4A-202ENST00000342409 ANP32CO43423 234 aa23.83■■□□□ 1.41
FRMD4A-202ENST00000342409 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
FRMD4A-202ENST00000342409 ADAMTSL3P82987 1691 aa23.82■■□□□ 1.4
FRMD4A-202ENST00000342409 RIMS1Q86UR5 1692 aaKnown RBP23.82■■□□□ 1.4
FRMD4A-202ENST00000342409 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
FRMD4A-202ENST00000342409 CEBPAP49715 358 aaPredicted RBP23.81■■□□□ 1.4
FRMD4A-202ENST00000342409 RIMS2Q9UQ26 1411 aa23.81■■□□□ 1.4
FRMD4A-202ENST00000342409 EIF3AQ14152 1382 aaKnown RBP23.8■■□□□ 1.4
FRMD4A-202ENST00000342409 ALKQ9UM73 1620 aa23.8■■□□□ 1.4
FRMD4A-202ENST00000342409 NRXN3Q9Y4C0 1643 aa23.8■■□□□ 1.4
FRMD4A-202ENST00000342409 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
FRMD4A-202ENST00000342409 STAG3Q9UJ98 1225 aa23.79■■□□□ 1.4
FRMD4A-202ENST00000342409 MYOM1P52179 1685 aa23.79■■□□□ 1.4
FRMD4A-202ENST00000342409 TMF1P82094 1093 aa23.76■■□□□ 1.39
FRMD4A-202ENST00000342409 NLRP1Q9C000 1473 aa23.76■■□□□ 1.39
FRMD4A-202ENST00000342409 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
FRMD4A-202ENST00000342409 PTPRMP28827 1452 aa23.75■■□□□ 1.39
FRMD4A-202ENST00000342409 SBNO2Q9Y2G9 1366 aa23.73■■□□□ 1.39
FRMD4A-202ENST00000342409 TRAK1Q9UPV9 953 aa23.73■■□□□ 1.39
FRMD4A-202ENST00000342409 YTHDC1Q96MU7 727 aaKnown RBP23.72■■□□□ 1.39
FRMD4A-202ENST00000342409 SENP3Q9H4L4 574 aaPredicted RBP23.72■■□□□ 1.39
FRMD4A-202ENST00000342409 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
FRMD4A-202ENST00000342409 TMEM2Q9UHN6 1383 aa23.69■■□□□ 1.38
FRMD4A-202ENST00000342409 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
FRMD4A-202ENST00000342409 YTHDC2Q9H6S0 1430 aaKnown RBP23.67■■□□□ 1.38
FRMD4A-202ENST00000342409 PLPPR3Q6T4P5 718 aa23.64■■□□□ 1.38
FRMD4A-202ENST00000342409 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.38
FRMD4A-202ENST00000342409 SLIT1O75093 1534 aa23.64■■□□□ 1.38
FRMD4A-202ENST00000342409 ARHGAP23Q9P227 1491 aa23.64■■□□□ 1.37
FRMD4A-202ENST00000342409 PER1O15534 1290 aaPredicted RBP23.64■■□□□ 1.37
FRMD4A-202ENST00000342409 TULP4Q9NRJ4 1543 aa23.63■■□□□ 1.37
FRMD4A-202ENST00000342409 SETD1BQ9UPS6 1966 aaKnown RBP23.61■■□□□ 1.37
FRMD4A-202ENST00000342409 ZNF142P52746 1687 aaPredicted RBP23.61■■□□□ 1.37
FRMD4A-202ENST00000342409 KNDC1Q76NI1 1749 aa23.61■■□□□ 1.37
FRMD4A-202ENST00000342409 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
FRMD4A-202ENST00000342409 CDCA8Q53HL2 280 aa23.61■■□□□ 1.37
FRMD4A-202ENST00000342409 CEP170BQ9Y4F5 1589 aaPredicted RBP23.6■■□□□ 1.37
FRMD4A-202ENST00000342409 DLC1Q96QB1 1528 aa23.6■■□□□ 1.37
FRMD4A-202ENST00000342409 SLC24A1O60721 1099 aa23.59■■□□□ 1.37
FRMD4A-202ENST00000342409 PANK3Q9H999 370 aa23.59■■□□□ 1.37
FRMD4A-202ENST00000342409 STK26Q9P289 416 aa23.59■■□□□ 1.37
FRMD4A-202ENST00000342409 LTKP29376 864 aa23.59■■□□□ 1.37
FRMD4A-202ENST00000342409 ADAMTS13Q76LX8 1427 aa23.58■■□□□ 1.36
FRMD4A-202ENST00000342409 METP08581 1390 aa23.57■■□□□ 1.36
FRMD4A-202ENST00000342409 LRPPRCP42704 1394 aaKnown RBP23.57■■□□□ 1.36
FRMD4A-202ENST00000342409 PLEKHG1Q9ULL1 1385 aa23.56■■□□□ 1.36
FRMD4A-202ENST00000342409 MED14O60244 1454 aa23.55■■□□□ 1.36
FRMD4A-202ENST00000342409 HDGFP51858 240 aaKnown RBP23.55■■□□□ 1.36
FRMD4A-202ENST00000342409 ABCC11Q96J66 1382 aa23.52■■□□□ 1.36
FRMD4A-202ENST00000342409 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.36
FRMD4A-202ENST00000342409 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.35
FRMD4A-202ENST00000342409 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
FRMD4A-202ENST00000342409 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
FRMD4A-202ENST00000342409 CPS1P31327 1500 aa23.51■■□□□ 1.35
FRMD4A-202ENST00000342409 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
FRMD4A-202ENST00000342409 TXNDC2Q86VQ3 553 aa23.5■■□□□ 1.35
FRMD4A-202ENST00000342409 KTN1Q86UP2 1357 aaKnown RBP23.49■■□□□ 1.35
FRMD4A-202ENST00000342409 TECPR2O15040 1411 aa23.49■■□□□ 1.35
FRMD4A-202ENST00000342409 THEMISQ8N1K5 641 aaPredicted RBP23.48■■□□□ 1.35
FRMD4A-202ENST00000342409 PLEKHH1Q9ULM0 1364 aa23.48■■□□□ 1.35
FRMD4A-202ENST00000342409 PUS7Q96PZ0 661 aaKnown RBP23.47■■□□□ 1.35
FRMD4A-202ENST00000342409 EVC2Q86UK5 1308 aa23.46■■□□□ 1.35
FRMD4A-202ENST00000342409 RALBP1Q15311 655 aa23.46■■□□□ 1.35
FRMD4A-202ENST00000342409 MRS2Q9HD23 443 aa23.45■■□□□ 1.34
FRMD4A-202ENST00000342409 POGKQ9P215 609 aa23.45■■□□□ 1.34
FRMD4A-202ENST00000342409 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
FRMD4A-202ENST00000342409 AMER1Q5JTC6 1135 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms