RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
LMX1A-202ENST00000342310 MINK1Q8N4C8 1332 aaPredicted RBP16.15■□□□□ 0.18
LMX1A-202ENST00000342310 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
LMX1A-202ENST00000342310 KANK1Q14678 1352 aa16.14■□□□□ 0.17
LMX1A-202ENST00000342310 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
LMX1A-202ENST00000342310 APBB1O00213 710 aa16.14■□□□□ 0.17
LMX1A-202ENST00000342310 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
LMX1A-202ENST00000342310 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
LMX1A-202ENST00000342310 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
LMX1A-202ENST00000342310 BCORL1Q5H9F3 1711 aa16.13■□□□□ 0.17
LMX1A-202ENST00000342310 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
LMX1A-202ENST00000342310 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
LMX1A-202ENST00000342310 FAM161AQ3B820 660 aa16.12■□□□□ 0.17
LMX1A-202ENST00000342310 CENPQQ7L2Z9 268 aaPredicted RBP16.12■□□□□ 0.17
LMX1A-202ENST00000342310 ITPRIPQ8IWB1 547 aa16.12■□□□□ 0.17
LMX1A-202ENST00000342310 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
LMX1A-202ENST00000342310 CCDC141Q6ZP82 1450 aa16.12■□□□□ 0.17
LMX1A-202ENST00000342310 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
LMX1A-202ENST00000342310 MFAP1P55081 439 aaKnown RBP16.11■□□□□ 0.17
LMX1A-202ENST00000342310 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
LMX1A-202ENST00000342310 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
LMX1A-202ENST00000342310 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
LMX1A-202ENST00000342310 GCC2Q8IWJ2 1684 aa16.11■□□□□ 0.17
LMX1A-202ENST00000342310 SMC4Q9NTJ3 1288 aa16.1■□□□□ 0.17
LMX1A-202ENST00000342310 MAPK8IP3Q9UPT6 1336 aa16.1■□□□□ 0.17
LMX1A-202ENST00000342310 IGHDP01880 384 aa16.1■□□□□ 0.17
LMX1A-202ENST00000342310 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
LMX1A-202ENST00000342310 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
LMX1A-202ENST00000342310 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
LMX1A-202ENST00000342310 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.17
LMX1A-202ENST00000342310 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.17
LMX1A-202ENST00000342310 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
LMX1A-202ENST00000342310 SLFN5Q08AF3 891 aa16.07■□□□□ 0.16
LMX1A-202ENST00000342310 E9PSI1 815 aa16.07■□□□□ 0.16
LMX1A-202ENST00000342310 LRPPRCP42704 1394 aaKnown RBP16.07■□□□□ 0.16
LMX1A-202ENST00000342310 FAM135AQ9P2D6 1515 aa16.06■□□□□ 0.16
LMX1A-202ENST00000342310 MS4A1P11836 297 aa16.06■□□□□ 0.16
LMX1A-202ENST00000342310 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
LMX1A-202ENST00000342310 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
LMX1A-202ENST00000342310 TRAPPC8Q9Y2L5 1435 aa16.05■□□□□ 0.16
LMX1A-202ENST00000342310 HMOX1P09601 288 aa16.05■□□□□ 0.16
LMX1A-202ENST00000342310 WWC1Q8IX03 1113 aa16.05■□□□□ 0.16
LMX1A-202ENST00000342310 A2MP01023 1474 aa16.04■□□□□ 0.16
LMX1A-202ENST00000342310 SEC24BO95487 1268 aa16.04■□□□□ 0.16
LMX1A-202ENST00000342310 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
LMX1A-202ENST00000342310 BECN1Q14457 450 aa16.01■□□□□ 0.15
LMX1A-202ENST00000342310 GSE1Q14687 1217 aa16.01■□□□□ 0.15
LMX1A-202ENST00000342310 EIF3AQ14152 1382 aaKnown RBP16.01■□□□□ 0.15
LMX1A-202ENST00000342310 C1orf115Q9H7X2 142 aa16.01■□□□□ 0.15
LMX1A-202ENST00000342310 ZBTB7CA1YPR0 619 aa16■□□□□ 0.15
LMX1A-202ENST00000342310 RLBP1P12271 317 aa15.99■□□□□ 0.15
LMX1A-202ENST00000342310 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
LMX1A-202ENST00000342310 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
LMX1A-202ENST00000342310 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
LMX1A-202ENST00000342310 KDM5CP41229 1560 aa15.98■□□□□ 0.15
LMX1A-202ENST00000342310 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
LMX1A-202ENST00000342310 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
LMX1A-202ENST00000342310 MBD5Q9P267 1494 aa15.97■□□□□ 0.15
LMX1A-202ENST00000342310 RIPK4P57078 832 aa15.97■□□□□ 0.15
LMX1A-202ENST00000342310 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
LMX1A-202ENST00000342310 RUNDC1Q96C34 613 aa15.97■□□□□ 0.15
LMX1A-202ENST00000342310 ESF1Q9H501 851 aaKnown RBP15.97■□□□□ 0.15
LMX1A-202ENST00000342310 CGNL1Q0VF96 1302 aa15.97■□□□□ 0.15
LMX1A-202ENST00000342310 UHRF1BP1Q6BDS2 1440 aa15.96■□□□□ 0.15
LMX1A-202ENST00000342310 C8orf34Q49A92 452 aa15.96■□□□□ 0.15
LMX1A-202ENST00000342310 PCDHB15Q9Y5E8 787 aa15.96■□□□□ 0.15
LMX1A-202ENST00000342310 NSD3Q9BZ95 1437 aa15.95■□□□□ 0.14
LMX1A-202ENST00000342310 RWDD1Q9H446 243 aaPredicted RBP15.95■□□□□ 0.14
LMX1A-202ENST00000342310 ADGRL2O95490 1459 aa15.94■□□□□ 0.14
LMX1A-202ENST00000342310 MAGI2Q86UL8 1455 aa15.94■□□□□ 0.14
LMX1A-202ENST00000342310 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
LMX1A-202ENST00000342310 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
LMX1A-202ENST00000342310 ABCC10Q5T3U5 1492 aa15.93■□□□□ 0.14
LMX1A-202ENST00000342310 PRAM1Q96QH2 718 aa15.93■□□□□ 0.14
LMX1A-202ENST00000342310 DZIP1LQ8IYY4 767 aaKnown RBP15.92■□□□□ 0.14
LMX1A-202ENST00000342310 RARSP54136 660 aaKnown RBP15.92■□□□□ 0.14
LMX1A-202ENST00000342310 ZKSCAN2Q63HK3 967 aa15.92■□□□□ 0.14
LMX1A-202ENST00000342310 NUP160Q12769 1436 aa15.92■□□□□ 0.14
LMX1A-202ENST00000342310 ITSN2Q9NZM3 1697 aa15.91■□□□□ 0.14
LMX1A-202ENST00000342310 NCLP19338 710 aaKnown RBP15.91■□□□□ 0.14
LMX1A-202ENST00000342310 FBXO31Q5XUX0 539 aaPredicted RBP15.91■□□□□ 0.14
LMX1A-202ENST00000342310 ANKRD45Q5TZF3 282 aa15.9■□□□□ 0.14
LMX1A-202ENST00000342310 CABP1Q9NZU7 370 aa15.9■□□□□ 0.14
LMX1A-202ENST00000342310 EVC2Q86UK5 1308 aa15.9■□□□□ 0.14
LMX1A-202ENST00000342310 WAPLQ7Z5K2 1190 aa15.9■□□□□ 0.14
LMX1A-202ENST00000342310 PMFBP1Q8TBY8 1022 aa15.9■□□□□ 0.14
LMX1A-202ENST00000342310 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
LMX1A-202ENST00000342310 NOS1P29475 1434 aa15.89■□□□□ 0.13
LMX1A-202ENST00000342310 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
LMX1A-202ENST00000342310 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
LMX1A-202ENST00000342310 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
LMX1A-202ENST00000342310 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
LMX1A-202ENST00000342310 ZNF428Q96B54 188 aa15.88■□□□□ 0.13
LMX1A-202ENST00000342310 FOXD4L5Q5VV16 416 aaPredicted RBP15.88■□□□□ 0.13
LMX1A-202ENST00000342310 FOXD4L4Q8WXT5 416 aaPredicted RBP15.88■□□□□ 0.13
LMX1A-202ENST00000342310 ERCC6L2Q5T890 1561 aa15.87■□□□□ 0.13
LMX1A-202ENST00000342310 VGFO15240 615 aaPredicted RBP15.87■□□□□ 0.13
LMX1A-202ENST00000342310 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
LMX1A-202ENST00000342310 HDGFL2Q7Z4V5 671 aaPredicted RBP15.87■□□□□ 0.13
LMX1A-202ENST00000342310 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms