RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
PDE4D-203ENST00000340635 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
PDE4D-203ENST00000340635 PDILTQ8N807 584 aa16.81■□□□□ 0.28
PDE4D-203ENST00000340635 CCDC97Q96F63 343 aaPredicted RBP16.81■□□□□ 0.28
PDE4D-203ENST00000340635 ENOX2Q16206 610 aaKnown RBP16.81■□□□□ 0.28
PDE4D-203ENST00000340635 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
PDE4D-203ENST00000340635 RALBP1Q15311 655 aa16.81■□□□□ 0.28
PDE4D-203ENST00000340635 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
PDE4D-203ENST00000340635 TTLL5Q6EMB2 1281 aa16.81■□□□□ 0.28
PDE4D-203ENST00000340635 SYCP1Q15431 976 aa16.8■□□□□ 0.28
PDE4D-203ENST00000340635 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
PDE4D-203ENST00000340635 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
PDE4D-203ENST00000340635 NAT10Q9H0A0 1025 aaKnown RBP16.8■□□□□ 0.28
PDE4D-203ENST00000340635 CCDC66A2RUB6 948 aa16.8■□□□□ 0.28
PDE4D-203ENST00000340635 ERLIN2O94905 339 aa16.79■□□□□ 0.28
PDE4D-203ENST00000340635 EVA1CP58658 441 aa16.79■□□□□ 0.28
PDE4D-203ENST00000340635 BRMS1Q9HCU9 246 aa16.79■□□□□ 0.28
PDE4D-203ENST00000340635 GOLGA6L7A0A1B0GV03 622 aa16.79■□□□□ 0.28
PDE4D-203ENST00000340635 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
PDE4D-203ENST00000340635 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
PDE4D-203ENST00000340635 LEKR1Q6ZMV7 388 aa16.78■□□□□ 0.28
PDE4D-203ENST00000340635 EZRP15311 586 aaKnown RBP16.78■□□□□ 0.28
PDE4D-203ENST00000340635 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
PDE4D-203ENST00000340635 GGT6Q6P531 493 aa16.77■□□□□ 0.28
PDE4D-203ENST00000340635 GOLGA6L10A6NI86 522 aa16.77■□□□□ 0.28
PDE4D-203ENST00000340635 INCENPQ9NQS7 918 aa16.77■□□□□ 0.28
PDE4D-203ENST00000340635 AXDND1Q5T1B0 1012 aaPredicted RBP16.77■□□□□ 0.28
PDE4D-203ENST00000340635 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
PDE4D-203ENST00000340635 CCDC146Q8IYE0 955 aa16.77■□□□□ 0.27
PDE4D-203ENST00000340635 KLHL34Q8N239 644 aa16.77■□□□□ 0.27
PDE4D-203ENST00000340635 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
PDE4D-203ENST00000340635 FOSBP53539 338 aa16.76■□□□□ 0.27
PDE4D-203ENST00000340635 DYDC1Q8WWB3 177 aa16.76■□□□□ 0.27
PDE4D-203ENST00000340635 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
PDE4D-203ENST00000340635 REC8O95072 547 aa16.76■□□□□ 0.27
PDE4D-203ENST00000340635 FAM43AQ8N2R8 423 aa16.76■□□□□ 0.27
PDE4D-203ENST00000340635 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
PDE4D-203ENST00000340635 NGEFQ8N5V2 710 aa16.75■□□□□ 0.27
PDE4D-203ENST00000340635 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
PDE4D-203ENST00000340635 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
PDE4D-203ENST00000340635 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
PDE4D-203ENST00000340635 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
PDE4D-203ENST00000340635 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
PDE4D-203ENST00000340635 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
PDE4D-203ENST00000340635 IKQ13123 557 aaPredicted RBP16.74■□□□□ 0.27
PDE4D-203ENST00000340635 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
PDE4D-203ENST00000340635 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
PDE4D-203ENST00000340635 RBM33Q96EV2 1170 aaKnown RBP16.73■□□□□ 0.27
PDE4D-203ENST00000340635 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
PDE4D-203ENST00000340635 XBP1P17861 261 aa16.72■□□□□ 0.27
PDE4D-203ENST00000340635 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
PDE4D-203ENST00000340635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■□□□ 12.3
PDE4D-203ENST00000340635 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
PDE4D-203ENST00000340635 GBP2P32456 591 aaPredicted RBP16.71■□□□□ 0.27
PDE4D-203ENST00000340635 MAGEC2Q9UBF1 373 aaPredicted RBP16.71■□□□□ 0.27
PDE4D-203ENST00000340635 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
PDE4D-203ENST00000340635 EEA1Q15075 1411 aa16.7■□□□□ 0.26
PDE4D-203ENST00000340635 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
PDE4D-203ENST00000340635 CDK5RAP3Q96JB5 506 aa16.7■□□□□ 0.26
PDE4D-203ENST00000340635 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
PDE4D-203ENST00000340635 CHMP5Q9NZZ3 219 aa16.7■□□□□ 0.26
PDE4D-203ENST00000340635 FYB1O15117 783 aa16.7■□□□□ 0.26
PDE4D-203ENST00000340635 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
PDE4D-203ENST00000340635 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
PDE4D-203ENST00000340635 DHX37Q8IY37 1157 aaKnown RBP16.68■□□□□ 0.26
PDE4D-203ENST00000340635 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
PDE4D-203ENST00000340635 CCP110O43303 1012 aa16.68■□□□□ 0.26
PDE4D-203ENST00000340635 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
PDE4D-203ENST00000340635 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
PDE4D-203ENST00000340635 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
PDE4D-203ENST00000340635 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
PDE4D-203ENST00000340635 TEFQ10587 303 aa16.67■□□□□ 0.26
PDE4D-203ENST00000340635 CENPQQ7L2Z9 268 aaPredicted RBP16.67■□□□□ 0.26
PDE4D-203ENST00000340635 PDE3BQ13370 1112 aa16.67■□□□□ 0.26
PDE4D-203ENST00000340635 FILIP1LQ4L180 1135 aa16.66■□□□□ 0.26
PDE4D-203ENST00000340635 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
PDE4D-203ENST00000340635 TAX1BP1Q86VP1 789 aa16.66■□□□□ 0.26
PDE4D-203ENST00000340635 SEPT11Q9NVA2 429 aaKnown RBP16.66■□□□□ 0.26
PDE4D-203ENST00000340635 PPM1FP49593 454 aaPredicted RBP16.66■□□□□ 0.26
PDE4D-203ENST00000340635 HSP90AB4PQ58FF6 505 aa16.66■□□□□ 0.26
PDE4D-203ENST00000340635 MTMR7Q9Y216 660 aa16.66■□□□□ 0.26
PDE4D-203ENST00000340635 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
PDE4D-203ENST00000340635 CCDC39Q9UFE4 941 aa16.65■□□□□ 0.26
PDE4D-203ENST00000340635 NEBLO76041 1014 aa16.65■□□□□ 0.26
PDE4D-203ENST00000340635 NF2P35240 595 aa16.65■□□□□ 0.26
PDE4D-203ENST00000340635 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
PDE4D-203ENST00000340635 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
PDE4D-203ENST00000340635 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDE4D-203ENST00000340635 RABEP1Q15276 862 aa16.65■□□□□ 0.26
PDE4D-203ENST00000340635 SMC2O95347 1197 aa16.64■□□□□ 0.25
PDE4D-203ENST00000340635 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
PDE4D-203ENST00000340635 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
PDE4D-203ENST00000340635 CENPHQ9H3R5 247 aa16.64■□□□□ 0.25
PDE4D-203ENST00000340635 TXLNAP40222 546 aa16.64■□□□□ 0.25
PDE4D-203ENST00000340635 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
PDE4D-203ENST00000340635 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
PDE4D-203ENST00000340635 LUC7LQ9NQ29 371 aaKnown RBP16.63■□□□□ 0.25
PDE4D-203ENST00000340635 DDX58O95786 925 aaKnown RBP16.63■□□□□ 0.25
PDE4D-203ENST00000340635 NUTM2FA1L443 756 aa16.62■□□□□ 0.25
PDE4D-203ENST00000340635 DESP17661 470 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms