RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
RBFOX1-202ENST00000340209 PER1O15534 1290 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-202ENST00000340209 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-202ENST00000340209 CEP152O94986 1710 aa13.56□□□□□ -0.24
RBFOX1-202ENST00000340209 ADAMTS8Q9UP79 889 aa13.55□□□□□ -0.24
RBFOX1-202ENST00000340209 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
RBFOX1-202ENST00000340209 MAGI2Q86UL8 1455 aa13.55□□□□□ -0.24
RBFOX1-202ENST00000340209 TRPM2O94759 1503 aa13.55□□□□□ -0.24
RBFOX1-202ENST00000340209 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
RBFOX1-202ENST00000340209 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 PLIN1O60240 522 aa13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 PPP2R1AP30153 589 aa13.54□□□□□ -0.24
RBFOX1-202ENST00000340209 GPRASP1Q5JY77 1395 aa13.53□□□□□ -0.24
RBFOX1-202ENST00000340209 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
RBFOX1-202ENST00000340209 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
RBFOX1-202ENST00000340209 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-202ENST00000340209 SPHKAPQ2M3C7 1700 aa13.53□□□□□ -0.24
RBFOX1-202ENST00000340209 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.24
RBFOX1-202ENST00000340209 PTPRTO14522 1441 aa13.52□□□□□ -0.24
RBFOX1-202ENST00000340209 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 RIMBP3CA6NJZ7 1639 aa13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 TET3O43151 1660 aa13.52□□□□□ -0.25
RBFOX1-202ENST00000340209 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-202ENST00000340209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
RBFOX1-202ENST00000340209 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
RBFOX1-202ENST00000340209 EFCAB6Q5THR3 1501 aa13.5□□□□□ -0.25
RBFOX1-202ENST00000340209 EIF2AK4Q9P2K8 1649 aaKnown RBP13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 SOX12O15370 315 aa13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 MYT1Q01538 1121 aa13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 WAPLQ7Z5K2 1190 aa13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 MLH3Q9UHC1 1453 aa13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 CARD14Q9BXL6 1004 aa13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 GGNBP2Q9H3C7 697 aa13.49□□□□□ -0.25
RBFOX1-202ENST00000340209 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-202ENST00000340209 NEO1Q92859 1461 aa13.48□□□□□ -0.25
RBFOX1-202ENST00000340209 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-202ENST00000340209 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-202ENST00000340209 APAF1O14727 1248 aa13.48□□□□□ -0.25
RBFOX1-202ENST00000340209 PARD3Q8TEW0 1356 aa13.47□□□□□ -0.25
RBFOX1-202ENST00000340209 MADDQ8WXG6 1647 aa13.47□□□□□ -0.25
RBFOX1-202ENST00000340209 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
RBFOX1-202ENST00000340209 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
RBFOX1-202ENST00000340209 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
RBFOX1-202ENST00000340209 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
RBFOX1-202ENST00000340209 ABCC3O15438 1527 aa13.46□□□□□ -0.25
RBFOX1-202ENST00000340209 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.26
RBFOX1-202ENST00000340209 FBLN1P23142 703 aa13.46□□□□□ -0.26
RBFOX1-202ENST00000340209 SLC52A1Q9NWF4 448 aa13.46□□□□□ -0.26
RBFOX1-202ENST00000340209 TXNDC2Q86VQ3 553 aa13.45□□□□□ -0.26
RBFOX1-202ENST00000340209 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
RBFOX1-202ENST00000340209 NSD3Q9BZ95 1437 aa13.45□□□□□ -0.26
RBFOX1-202ENST00000340209 STAC3Q96MF2 364 aa13.44□□□□□ -0.26
RBFOX1-202ENST00000340209 KIF1BO60333 1816 aa13.44□□□□□ -0.26
RBFOX1-202ENST00000340209 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
RBFOX1-202ENST00000340209 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
RBFOX1-202ENST00000340209 DIP2CQ9Y2E4 1556 aa13.43□□□□□ -0.26
RBFOX1-202ENST00000340209 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
RBFOX1-202ENST00000340209 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 MTHFSP49914 203 aa13.42□□□□□ -0.26
RBFOX1-202ENST00000340209 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
RBFOX1-202ENST00000340209 CABP1Q9NZU7 370 aa13.4□□□□□ -0.26
RBFOX1-202ENST00000340209 ERVK-7P63135 1459 aa13.4□□□□□ -0.26
RBFOX1-202ENST00000340209 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 VWDEQ8N2E2 1590 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
RBFOX1-202ENST00000340209 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
RBFOX1-202ENST00000340209 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
RBFOX1-202ENST00000340209 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
RBFOX1-202ENST00000340209 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
RBFOX1-202ENST00000340209 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-202ENST00000340209 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-202ENST00000340209 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-202ENST00000340209 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
RBFOX1-202ENST00000340209 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-202ENST00000340209 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
RBFOX1-202ENST00000340209 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-202ENST00000340209 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
RBFOX1-202ENST00000340209 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
RBFOX1-202ENST00000340209 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
RBFOX1-202ENST00000340209 DIP2BQ9P265 1576 aa13.35□□□□□ -0.27
RBFOX1-202ENST00000340209 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-202ENST00000340209 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms