RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
CCDC144CP-201ENST00000340196 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
CCDC144CP-201ENST00000340196 CD109Q6YHK3 1445 aa15.8■□□□□ 0.12
CCDC144CP-201ENST00000340196 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
CCDC144CP-201ENST00000340196 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
CCDC144CP-201ENST00000340196 CCDC144AA2RUR9 1427 aa15.79■□□□□ 0.12
CCDC144CP-201ENST00000340196 SCAPERQ9BY12 1400 aa15.78■□□□□ 0.12
CCDC144CP-201ENST00000340196 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
CCDC144CP-201ENST00000340196 AFAP1Q8N556 730 aa15.78■□□□□ 0.12
CCDC144CP-201ENST00000340196 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
CCDC144CP-201ENST00000340196 FAM135AQ9P2D6 1515 aa15.77■□□□□ 0.12
CCDC144CP-201ENST00000340196 GLI2P10070 1586 aa15.77■□□□□ 0.11
CCDC144CP-201ENST00000340196 PLA2R1Q13018 1463 aa15.77■□□□□ 0.11
CCDC144CP-201ENST00000340196 ATP7AQ04656 1500 aa15.76■□□□□ 0.11
CCDC144CP-201ENST00000340196 IQGAP3Q86VI3 1631 aa15.75■□□□□ 0.11
CCDC144CP-201ENST00000340196 A2MP01023 1474 aa15.75■□□□□ 0.11
CCDC144CP-201ENST00000340196 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
CCDC144CP-201ENST00000340196 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
CCDC144CP-201ENST00000340196 MAP3K4Q9Y6R4 1608 aa15.74■□□□□ 0.11
CCDC144CP-201ENST00000340196 NEO1Q92859 1461 aa15.74■□□□□ 0.11
CCDC144CP-201ENST00000340196 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
CCDC144CP-201ENST00000340196 ZNF518AQ6AHZ1 1483 aa15.73■□□□□ 0.11
CCDC144CP-201ENST00000340196 RGS3P49796 1198 aa15.73■□□□□ 0.11
CCDC144CP-201ENST00000340196 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
CCDC144CP-201ENST00000340196 COL17A1Q9UMD9 1497 aaPredicted RBP15.72■□□□□ 0.11
CCDC144CP-201ENST00000340196 KIDINS220Q9ULH0 1771 aa15.71■□□□□ 0.11
CCDC144CP-201ENST00000340196 DEPDC5O75140 1603 aa15.71■□□□□ 0.11
CCDC144CP-201ENST00000340196 MS4A1P11836 297 aa15.7■□□□□ 0.1
CCDC144CP-201ENST00000340196 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
CCDC144CP-201ENST00000340196 BLMP54132 1417 aaPredicted RBP15.7■□□□□ 0.1
CCDC144CP-201ENST00000340196 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
CCDC144CP-201ENST00000340196 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
CCDC144CP-201ENST00000340196 EIF2AK4Q9P2K8 1649 aaKnown RBP15.69■□□□□ 0.1
CCDC144CP-201ENST00000340196 NPM3O75607 178 aaKnown RBP15.69■□□□□ 0.1
CCDC144CP-201ENST00000340196 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
CCDC144CP-201ENST00000340196 TMF1P82094 1093 aa15.68■□□□□ 0.1
CCDC144CP-201ENST00000340196 DUSP27Q5VZP5 1158 aa15.68■□□□□ 0.1
CCDC144CP-201ENST00000340196 PPP2R1AP30153 589 aa15.67■□□□□ 0.1
CCDC144CP-201ENST00000340196 DIP2BQ9P265 1576 aa15.67■□□□□ 0.1
CCDC144CP-201ENST00000340196 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
CCDC144CP-201ENST00000340196 ATP10AO60312 1499 aa15.66■□□□□ 0.1
CCDC144CP-201ENST00000340196 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
CCDC144CP-201ENST00000340196 WDR43Q15061 677 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCDC144CP-201ENST00000340196 NFKBIBQ15653 356 aa15.66■□□□□ 0.1
CCDC144CP-201ENST00000340196 BCAR3O75815 825 aa15.65■□□□□ 0.1
CCDC144CP-201ENST00000340196 VWDEQ8N2E2 1590 aa15.65■□□□□ 0.1
CCDC144CP-201ENST00000340196 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
CCDC144CP-201ENST00000340196 C8orf34Q49A92 452 aa15.64■□□□□ 0.09
CCDC144CP-201ENST00000340196 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.09
CCDC144CP-201ENST00000340196 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
CCDC144CP-201ENST00000340196 ZMYM4Q5VZL5 1548 aa15.64■□□□□ 0.09
CCDC144CP-201ENST00000340196 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
CCDC144CP-201ENST00000340196 RICTORQ6R327 1708 aa15.62■□□□□ 0.09
CCDC144CP-201ENST00000340196 MROH1Q8NDA8 1641 aa15.62■□□□□ 0.09
CCDC144CP-201ENST00000340196 APAF1O14727 1248 aa15.62■□□□□ 0.09
CCDC144CP-201ENST00000340196 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
CCDC144CP-201ENST00000340196 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
CCDC144CP-201ENST00000340196 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
CCDC144CP-201ENST00000340196 FRAT1Q92837 279 aaPredicted RBP15.61■□□□□ 0.09
CCDC144CP-201ENST00000340196 TET3O43151 1660 aa15.6■□□□□ 0.09
CCDC144CP-201ENST00000340196 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
CCDC144CP-201ENST00000340196 PPRC1Q5VV67 1664 aaKnown RBP15.59■□□□□ 0.09
CCDC144CP-201ENST00000340196 RNF17Q9BXT8 1623 aaKnown RBP15.59■□□□□ 0.09
CCDC144CP-201ENST00000340196 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CCDC144CP-201ENST00000340196 FRMPD1Q5SYB0 1578 aa15.59■□□□□ 0.09
CCDC144CP-201ENST00000340196 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.09
CCDC144CP-201ENST00000340196 CENPQQ7L2Z9 268 aaPredicted RBP15.58■□□□□ 0.09
CCDC144CP-201ENST00000340196 ABCA6Q8N139 1617 aa15.58■□□□□ 0.08
CCDC144CP-201ENST00000340196 DAXXQ9UER7 740 aaPredicted RBP15.58■□□□□ 0.08
CCDC144CP-201ENST00000340196 ZNF521Q96K83 1311 aa15.58■□□□□ 0.08
CCDC144CP-201ENST00000340196 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
CCDC144CP-201ENST00000340196 WASHC2CQ9Y4E1 1318 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 IGHDP01880 384 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 GSE1Q14687 1217 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 DDRGK1Q96HY6 314 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 KANK1Q14678 1352 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 KIF3BO15066 747 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 NEUROD2Q15784 382 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 PKNOX2Q96KN3 472 aa15.57■□□□□ 0.08
CCDC144CP-201ENST00000340196 TNNT2P45379 298 aaPredicted RBP15.56■□□□□ 0.08
CCDC144CP-201ENST00000340196 PTPRTO14522 1441 aa15.56■□□□□ 0.08
CCDC144CP-201ENST00000340196 LMTK2Q8IWU2 1503 aa15.56■□□□□ 0.08
CCDC144CP-201ENST00000340196 SEC24BO95487 1268 aa15.56■□□□□ 0.08
CCDC144CP-201ENST00000340196 SLFN5Q08AF3 891 aa15.56■□□□□ 0.08
CCDC144CP-201ENST00000340196 RAPGEF3O95398 923 aa15.55■□□□□ 0.08
CCDC144CP-201ENST00000340196 KIF13AQ9H1H9 1805 aa15.55■□□□□ 0.08
CCDC144CP-201ENST00000340196 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
CCDC144CP-201ENST00000340196 DIP2CQ9Y2E4 1556 aa15.54■□□□□ 0.08
CCDC144CP-201ENST00000340196 TNNQ9UQP3 1299 aa15.54■□□□□ 0.08
CCDC144CP-201ENST00000340196 RRP7AQ9Y3A4 280 aaKnown RBP15.54■□□□□ 0.08
CCDC144CP-201ENST00000340196 SPHKAPQ2M3C7 1700 aa15.54■□□□□ 0.08
CCDC144CP-201ENST00000340196 TRPM2O94759 1503 aa15.54■□□□□ 0.08
CCDC144CP-201ENST00000340196 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
CCDC144CP-201ENST00000340196 BCL2L13Q9BXK5 485 aa15.52■□□□□ 0.07
CCDC144CP-201ENST00000340196 TSPOAP1O95153 1857 aa15.51■□□□□ 0.07
CCDC144CP-201ENST00000340196 EFCAB6Q5THR3 1501 aa15.51■□□□□ 0.07
CCDC144CP-201ENST00000340196 CFAP70Q5T0N1 1121 aa15.5■□□□□ 0.07
CCDC144CP-201ENST00000340196 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms