RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 ZNF330Q9Y3S2 320 aaPredicted RBP23.27■■□□□ 1.32
FGFR3-202ENST00000340107 HMOX1P09601 288 aa23.26■■□□□ 1.31
FGFR3-202ENST00000340107 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
FGFR3-202ENST00000340107 CENPQQ7L2Z9 268 aaPredicted RBP23.26■■□□□ 1.31
FGFR3-202ENST00000340107 LMOD3Q0VAK6 560 aa23.25■■□□□ 1.31
FGFR3-202ENST00000340107 ZKSCAN2Q63HK3 967 aa23.25■■□□□ 1.31
FGFR3-202ENST00000340107 PTPN23Q9H3S7 1636 aa23.24■■□□□ 1.31
FGFR3-202ENST00000340107 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
FGFR3-202ENST00000340107 FGD1P98174 961 aa23.23■■□□□ 1.31
FGFR3-202ENST00000340107 PTPRKQ15262 1439 aa23.23■■□□□ 1.31
FGFR3-202ENST00000340107 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
FGFR3-202ENST00000340107 CAMSAP2Q08AD1 1489 aa23.21■■□□□ 1.31
FGFR3-202ENST00000340107 TCP11L2Q8N4U5 519 aa23.21■■□□□ 1.31
FGFR3-202ENST00000340107 PRAM1Q96QH2 718 aa23.2■■□□□ 1.3
FGFR3-202ENST00000340107 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
FGFR3-202ENST00000340107 NAP1L2Q9ULW6 460 aaPredicted RBP23.19■■□□□ 1.3
FGFR3-202ENST00000340107 AKNAQ7Z591 1439 aa23.18■■□□□ 1.3
FGFR3-202ENST00000340107 PLEKHH2Q8IVE3 1493 aa23.18■■□□□ 1.3
FGFR3-202ENST00000340107 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
FGFR3-202ENST00000340107 ANKRD45Q5TZF3 282 aa23.16■■□□□ 1.3
FGFR3-202ENST00000340107 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
FGFR3-202ENST00000340107 NECTIN2Q92692 538 aa23.15■■□□□ 1.3
FGFR3-202ENST00000340107 PLCB2Q00722 1185 aa23.14■■□□□ 1.3
FGFR3-202ENST00000340107 NUTM2GQ5VZR2 741 aa23.14■■□□□ 1.3
FGFR3-202ENST00000340107 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.29
FGFR3-202ENST00000340107 DZIP1LQ8IYY4 767 aaKnown RBP23.13■■□□□ 1.29
FGFR3-202ENST00000340107 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
FGFR3-202ENST00000340107 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
FGFR3-202ENST00000340107 TRIM6-TRIM34B2RNG4 842 aa23.13■■□□□ 1.29
FGFR3-202ENST00000340107 NPHP1O15259 732 aa23.12■■□□□ 1.29
FGFR3-202ENST00000340107 TXNDC2Q86VQ3 553 aa23.12■■□□□ 1.29
FGFR3-202ENST00000340107 HMMRO75330 724 aa23.12■■□□□ 1.29
FGFR3-202ENST00000340107 NGEFQ8N5V2 710 aa23.12■■□□□ 1.29
FGFR3-202ENST00000340107 MCCP23508 829 aa23.12■■□□□ 1.29
FGFR3-202ENST00000340107 PTMAP06454 111 aaKnown RBP23.11■■□□□ 1.29
FGFR3-202ENST00000340107 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
FGFR3-202ENST00000340107 ERBINQ96RT1 1412 aa23.1■■□□□ 1.29
FGFR3-202ENST00000340107 KIAA1211Q6ZU35 1233 aa23.09■■□□□ 1.29
FGFR3-202ENST00000340107 CABP1Q9NZU7 370 aa23.09■■□□□ 1.29
FGFR3-202ENST00000340107 BCAR3O75815 825 aa23.07■■□□□ 1.28
FGFR3-202ENST00000340107 EIF2S2P20042 333 aaKnown RBP23.06■■□□□ 1.28
FGFR3-202ENST00000340107 SLC52A1Q9NWF4 448 aa23.06■■□□□ 1.28
FGFR3-202ENST00000340107 CHMP3Q9Y3E7 222 aa23.06■■□□□ 1.28
FGFR3-202ENST00000340107 DDX19BQ9UMR2 479 aa23.05■■□□□ 1.28
FGFR3-202ENST00000340107 NOL8Q76FK4 1167 aaKnown RBP23.05■■□□□ 1.28
FGFR3-202ENST00000340107 TEFQ10587 303 aa23.05■■□□□ 1.28
FGFR3-202ENST00000340107 GPATCH8Q9UKJ3 1502 aaKnown RBP23.04■■□□□ 1.28
FGFR3-202ENST00000340107 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
FGFR3-202ENST00000340107 PSME1Q06323 249 aa23.04■■□□□ 1.28
FGFR3-202ENST00000340107 TSR2Q969E8 191 aaKnown RBP23.03■■□□□ 1.28
FGFR3-202ENST00000340107 CFAP44Q96MT7 982 aa23.03■■□□□ 1.28
FGFR3-202ENST00000340107 RPRD2Q5VT52 1461 aaKnown RBP23.03■■□□□ 1.28
FGFR3-202ENST00000340107 NLRP6P59044 892 aa23.02■■□□□ 1.28
FGFR3-202ENST00000340107 CDK19Q9BWU1 502 aa23.02■■□□□ 1.28
FGFR3-202ENST00000340107 MAPKBP1O60336 1514 aa23.02■■□□□ 1.28
FGFR3-202ENST00000340107 SLC26A8Q96RN1 970 aa23.02■■□□□ 1.28
FGFR3-202ENST00000340107 FANCIQ9NVI1 1328 aa23.01■■□□□ 1.27
FGFR3-202ENST00000340107 ZRSR1Q15695 479 aaKnown RBP23.01■■□□□ 1.27
FGFR3-202ENST00000340107 LNPKQ9C0E8 428 aa23.01■■□□□ 1.27
FGFR3-202ENST00000340107 CHMP4AQ9BY43 222 aa23.01■■□□□ 1.27
FGFR3-202ENST00000340107 EXOSC9Q06265 439 aaKnown RBP23.01■■□□□ 1.27
FGFR3-202ENST00000340107 ADGRF5Q8IZF2 1346 aa23■■□□□ 1.27
FGFR3-202ENST00000340107 GNAI1P63096 354 aa22.98■■□□□ 1.27
FGFR3-202ENST00000340107 GOLGA6L4A6NEF3 574 aa22.97■■□□□ 1.27
FGFR3-202ENST00000340107 NUP153P49790 1475 aaKnown RBP22.97■■□□□ 1.27
FGFR3-202ENST00000340107 RILPL2Q969X0 211 aa22.96■■□□□ 1.27
FGFR3-202ENST00000340107 FKBP5Q13451 457 aaPredicted RBP22.96■■□□□ 1.27
FGFR3-202ENST00000340107 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
FGFR3-202ENST00000340107 ATP10BO94823 1461 aa22.96■■□□□ 1.27
FGFR3-202ENST00000340107 KIF14Q15058 1648 aa22.96■■□□□ 1.27
FGFR3-202ENST00000340107 GBP4Q96PP9 640 aa22.96■■□□□ 1.27
FGFR3-202ENST00000340107 CD109Q6YHK3 1445 aa22.95■■□□□ 1.27
FGFR3-202ENST00000340107 API5Q9BZZ5 524 aaKnown RBP22.95■■□□□ 1.26
FGFR3-202ENST00000340107 TSPYL4Q9UJ04 414 aa22.95■■□□□ 1.26
FGFR3-202ENST00000340107 DNTTIP2Q5QJE6 756 aaKnown RBP22.95■■□□□ 1.26
FGFR3-202ENST00000340107 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
FGFR3-202ENST00000340107 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
FGFR3-202ENST00000340107 IDI1Q13907 227 aa22.92■■□□□ 1.26
FGFR3-202ENST00000340107 FBXO31Q5XUX0 539 aaPredicted RBP22.92■■□□□ 1.26
FGFR3-202ENST00000340107 WAPLQ7Z5K2 1190 aa22.92■■□□□ 1.26
FGFR3-202ENST00000340107 FOXD4L5Q5VV16 416 aaPredicted RBP22.91■■□□□ 1.26
FGFR3-202ENST00000340107 FOXD4L4Q8WXT5 416 aaPredicted RBP22.91■■□□□ 1.26
FGFR3-202ENST00000340107 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
FGFR3-202ENST00000340107 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
FGFR3-202ENST00000340107 GORABQ5T7V8 394 aa22.9■■□□□ 1.26
FGFR3-202ENST00000340107 ABTB2Q8N961 1025 aa22.89■■□□□ 1.25
FGFR3-202ENST00000340107 SMG6Q86US8 1419 aaKnown RBP22.89■■□□□ 1.25
FGFR3-202ENST00000340107 SULT6B1Q6IMI4 303 aa22.88■■□□□ 1.25
FGFR3-202ENST00000340107 HDAC5Q9UQL6 1122 aa22.88■■□□□ 1.25
FGFR3-202ENST00000340107 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
FGFR3-202ENST00000340107 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
FGFR3-202ENST00000340107 TAF7LQ5H9L4 462 aa22.87■■□□□ 1.25
FGFR3-202ENST00000340107 L1TD1Q5T7N2 865 aaKnown RBP22.87■■□□□ 1.25
FGFR3-202ENST00000340107 NAP1L5Q96NT1 182 aaPredicted RBP22.87■■□□□ 1.25
FGFR3-202ENST00000340107 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
FGFR3-202ENST00000340107 C9orf78Q9NZ63 289 aaPredicted RBP22.86■■□□□ 1.25
FGFR3-202ENST00000340107 SKAP1Q86WV1 359 aa22.85■■□□□ 1.25
FGFR3-202ENST00000340107 GPATCH3Q96I76 525 aa22.85■■□□□ 1.25
FGFR3-202ENST00000340107 C1orf115Q9H7X2 142 aa22.85■■□□□ 1.25
FGFR3-202ENST00000340107 WWC1Q8IX03 1113 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms