RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 CGNL1Q0VF96 1302 aa21.46■■□□□ 1.03
PRDM8-201ENST00000339711 ZCCHC11Q5TAX3 1644 aaKnown RBP21.46■■□□□ 1.03
PRDM8-201ENST00000339711 IDI1Q13907 227 aa21.44■■□□□ 1.02
PRDM8-201ENST00000339711 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
PRDM8-201ENST00000339711 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
PRDM8-201ENST00000339711 EID1Q9Y6B2 187 aa21.44■■□□□ 1.02
PRDM8-201ENST00000339711 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
PRDM8-201ENST00000339711 CABP2Q9NPB3 220 aa21.43■■□□□ 1.02
PRDM8-201ENST00000339711 LAS1LQ9Y4W2 734 aaKnown RBP21.42■■□□□ 1.02
PRDM8-201ENST00000339711 ATP7AQ04656 1500 aa21.42■■□□□ 1.02
PRDM8-201ENST00000339711 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
PRDM8-201ENST00000339711 PPP2R1AP30153 589 aa21.41■■□□□ 1.02
PRDM8-201ENST00000339711 DISP3Q9P2K9 1392 aa21.4■■□□□ 1.02
PRDM8-201ENST00000339711 FBXO31Q5XUX0 539 aaPredicted RBP21.4■■□□□ 1.02
PRDM8-201ENST00000339711 ADAMTS8Q9UP79 889 aa21.4■■□□□ 1.02
PRDM8-201ENST00000339711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.02
PRDM8-201ENST00000339711 FRAT1Q92837 279 aaPredicted RBP21.38■■□□□ 1.01
PRDM8-201ENST00000339711 NOS1P29475 1434 aa21.38■■□□□ 1.01
PRDM8-201ENST00000339711 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
PRDM8-201ENST00000339711 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.38■■□□□ 1.01
PRDM8-201ENST00000339711 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
PRDM8-201ENST00000339711 APAF1O14727 1248 aa21.37■■□□□ 1.01
PRDM8-201ENST00000339711 TESK2Q96S53 571 aa21.37■■□□□ 1.01
PRDM8-201ENST00000339711 SCAF11Q99590 1463 aaKnown RBP21.37■■□□□ 1.01
PRDM8-201ENST00000339711 PLEKHG5O94827 1062 aa21.37■■□□□ 1.01
PRDM8-201ENST00000339711 ABCC1P33527 1531 aa21.37■■□□□ 1.01
PRDM8-201ENST00000339711 SOX12O15370 315 aa21.37■■□□□ 1.01
PRDM8-201ENST00000339711 PRKCSHP14314 528 aaPredicted RBP21.37■■□□□ 1.01
PRDM8-201ENST00000339711 RGS3P49796 1198 aa21.36■■□□□ 1.01
PRDM8-201ENST00000339711 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
PRDM8-201ENST00000339711 SPATA31E1Q6ZUB1 1445 aa21.36■■□□□ 1.01
PRDM8-201ENST00000339711 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
PRDM8-201ENST00000339711 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
PRDM8-201ENST00000339711 UPF2Q9HAU5 1272 aaKnown RBP21.36■■□□□ 1.01
PRDM8-201ENST00000339711 MAST1Q9Y2H9 1570 aa21.35■■□□□ 1.01
PRDM8-201ENST00000339711 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
PRDM8-201ENST00000339711 RTN4Q9NQC3 1192 aaKnown RBP21.32■■□□□ 1
PRDM8-201ENST00000339711 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
PRDM8-201ENST00000339711 CDC42BPBQ9Y5S2 1711 aa21.31■■□□□ 1
PRDM8-201ENST00000339711 SHROOM2Q13796 1616 aa21.31■■□□□ 1
PRDM8-201ENST00000339711 ZBTB7CA1YPR0 619 aa21.3■■□□□ 1
PRDM8-201ENST00000339711 GGNBP2Q9H3C7 697 aa21.29■■□□□ 1
PRDM8-201ENST00000339711 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
PRDM8-201ENST00000339711 POGZQ7Z3K3 1410 aa21.28■■□□□ 1
PRDM8-201ENST00000339711 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
PRDM8-201ENST00000339711 NOP58Q9Y2X3 529 aaKnown RBP21.28■■□□□ 1
PRDM8-201ENST00000339711 MTHFSP49914 203 aa21.27■■□□□ 1
PRDM8-201ENST00000339711 KDM5DQ9BY66 1539 aa21.27■■□□□ 1
PRDM8-201ENST00000339711 FTSJ3Q8IY81 847 aaKnown RBP21.27■■□□□ 1
PRDM8-201ENST00000339711 PLIN1O60240 522 aa21.27■■□□□ 1
PRDM8-201ENST00000339711 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
PRDM8-201ENST00000339711 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
PRDM8-201ENST00000339711 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
PRDM8-201ENST00000339711 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
PRDM8-201ENST00000339711 EIF2AK4Q9P2K8 1649 aaKnown RBP21.24■□□□□ 0.99
PRDM8-201ENST00000339711 MYH16Q9H6N6 1097 aa21.23■□□□□ 0.99
PRDM8-201ENST00000339711 TXNDC2Q86VQ3 553 aa21.23■□□□□ 0.99
PRDM8-201ENST00000339711 LMOD2Q6P5Q4 547 aa21.22■□□□□ 0.99
PRDM8-201ENST00000339711 NEO1Q92859 1461 aa21.22■□□□□ 0.99
PRDM8-201ENST00000339711 NGDNQ8NEJ9 315 aaKnown RBP21.22■□□□□ 0.99
PRDM8-201ENST00000339711 EXOC6Q8TAG9 804 aa21.22■□□□□ 0.99
PRDM8-201ENST00000339711 CDK19Q9BWU1 502 aa21.22■□□□□ 0.99
PRDM8-201ENST00000339711 E9PSI1 815 aa21.21■□□□□ 0.99
PRDM8-201ENST00000339711 PER1O15534 1290 aaPredicted RBP21.21■□□□□ 0.99
PRDM8-201ENST00000339711 ATP10AO60312 1499 aa21.21■□□□□ 0.99
PRDM8-201ENST00000339711 PLXNC1O60486 1568 aa21.21■□□□□ 0.99
PRDM8-201ENST00000339711 ARAP3Q8WWN8 1544 aa21.2■□□□□ 0.98
PRDM8-201ENST00000339711 NGEFQ8N5V2 710 aa21.2■□□□□ 0.98
PRDM8-201ENST00000339711 CABP1Q9NZU7 370 aa21.19■□□□□ 0.98
PRDM8-201ENST00000339711 COG3Q96JB2 828 aa21.19■□□□□ 0.98
PRDM8-201ENST00000339711 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
PRDM8-201ENST00000339711 ZFYVE16Q7Z3T8 1539 aa21.19■□□□□ 0.98
PRDM8-201ENST00000339711 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
PRDM8-201ENST00000339711 NSD3Q9BZ95 1437 aa21.18■□□□□ 0.98
PRDM8-201ENST00000339711 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
PRDM8-201ENST00000339711 CFAP65Q6ZU64 1925 aaKnown RBP21.17■□□□□ 0.98
PRDM8-201ENST00000339711 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
PRDM8-201ENST00000339711 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
PRDM8-201ENST00000339711 WAPLQ7Z5K2 1190 aa21.16■□□□□ 0.98
PRDM8-201ENST00000339711 COL17A1Q9UMD9 1497 aaPredicted RBP21.16■□□□□ 0.98
PRDM8-201ENST00000339711 PARD3Q8TEW0 1356 aa21.15■□□□□ 0.98
PRDM8-201ENST00000339711 MS4A1P11836 297 aa21.14■□□□□ 0.98
PRDM8-201ENST00000339711 NPATQ14207 1427 aa21.14■□□□□ 0.98
PRDM8-201ENST00000339711 ATAD2Q6PL18 1390 aa21.14■□□□□ 0.97
PRDM8-201ENST00000339711 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
PRDM8-201ENST00000339711 MLH3Q9UHC1 1453 aa21.13■□□□□ 0.97
PRDM8-201ENST00000339711 DEKP35659 375 aaKnown RBP21.13■□□□□ 0.97
PRDM8-201ENST00000339711 TCP11L2Q8N4U5 519 aa21.13■□□□□ 0.97
PRDM8-201ENST00000339711 CRBNQ96SW2 442 aa21.13■□□□□ 0.97
PRDM8-201ENST00000339711 YEATS2Q9ULM3 1422 aa21.11■□□□□ 0.97
PRDM8-201ENST00000339711 KDM5CP41229 1560 aa21.11■□□□□ 0.97
PRDM8-201ENST00000339711 CEBPAP49715 358 aaPredicted RBP21.11■□□□□ 0.97
PRDM8-201ENST00000339711 PTPRTO14522 1441 aa21.11■□□□□ 0.97
PRDM8-201ENST00000339711 IQGAP3Q86VI3 1631 aa21.11■□□□□ 0.97
PRDM8-201ENST00000339711 CLUAP1Q96AJ1 413 aa21.1■□□□□ 0.97
PRDM8-201ENST00000339711 BCL2L13Q9BXK5 485 aa21.09■□□□□ 0.97
PRDM8-201ENST00000339711 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
PRDM8-201ENST00000339711 UNC13BO14795 1591 aa21.09■□□□□ 0.97
PRDM8-201ENST00000339711 THEMISQ8N1K5 641 aaPredicted RBP21.09■□□□□ 0.97
PRDM8-201ENST00000339711 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms