RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
LIMK1-201ENST00000336180 DEPDC5O75140 1603 aa17■□□□□ 0.31
LIMK1-201ENST00000336180 POLR1AO95602 1720 aaPredicted RBP17■□□□□ 0.31
LIMK1-201ENST00000336180 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
LIMK1-201ENST00000336180 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
LIMK1-201ENST00000336180 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
LIMK1-201ENST00000336180 MADDQ8WXG6 1647 aa16.98■□□□□ 0.31
LIMK1-201ENST00000336180 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
LIMK1-201ENST00000336180 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
LIMK1-201ENST00000336180 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
LIMK1-201ENST00000336180 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
LIMK1-201ENST00000336180 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
LIMK1-201ENST00000336180 RALBP1Q15311 655 aa16.96■□□□□ 0.31
LIMK1-201ENST00000336180 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
LIMK1-201ENST00000336180 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
LIMK1-201ENST00000336180 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
LIMK1-201ENST00000336180 SCAF11Q99590 1463 aaKnown RBP16.94■□□□□ 0.3
LIMK1-201ENST00000336180 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
LIMK1-201ENST00000336180 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
LIMK1-201ENST00000336180 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
LIMK1-201ENST00000336180 NEO1Q92859 1461 aa16.92■□□□□ 0.3
LIMK1-201ENST00000336180 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
LIMK1-201ENST00000336180 ABCC3O15438 1527 aa16.92■□□□□ 0.3
LIMK1-201ENST00000336180 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
LIMK1-201ENST00000336180 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
LIMK1-201ENST00000336180 DIP2CQ9Y2E4 1556 aa16.91■□□□□ 0.3
LIMK1-201ENST00000336180 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
LIMK1-201ENST00000336180 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
LIMK1-201ENST00000336180 DAXXQ9UER7 740 aaPredicted RBP16.91■□□□□ 0.3
LIMK1-201ENST00000336180 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
LIMK1-201ENST00000336180 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
LIMK1-201ENST00000336180 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
LIMK1-201ENST00000336180 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.3
LIMK1-201ENST00000336180 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
LIMK1-201ENST00000336180 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
LIMK1-201ENST00000336180 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
LIMK1-201ENST00000336180 BRD4O60885 1362 aaPredicted RBP16.88■□□□□ 0.29
LIMK1-201ENST00000336180 CFAP74Q9C0B2 1584 aa16.87■□□□□ 0.29
LIMK1-201ENST00000336180 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
LIMK1-201ENST00000336180 SIGLEC1Q9BZZ2 1709 aa16.87■□□□□ 0.29
LIMK1-201ENST00000336180 C14orf93Q9H972 538 aaKnown RBP16.87■□□□□ 0.29
LIMK1-201ENST00000336180 KIF1BO60333 1816 aa16.86■□□□□ 0.29
LIMK1-201ENST00000336180 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
LIMK1-201ENST00000336180 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
LIMK1-201ENST00000336180 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
LIMK1-201ENST00000336180 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
LIMK1-201ENST00000336180 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
LIMK1-201ENST00000336180 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
LIMK1-201ENST00000336180 DIP2BQ9P265 1576 aa16.83■□□□□ 0.29
LIMK1-201ENST00000336180 ERVK-7P63135 1459 aa16.83■□□□□ 0.28
LIMK1-201ENST00000336180 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
LIMK1-201ENST00000336180 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
LIMK1-201ENST00000336180 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
LIMK1-201ENST00000336180 IQGAP1P46940 1657 aa16.82■□□□□ 0.28
LIMK1-201ENST00000336180 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
LIMK1-201ENST00000336180 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
LIMK1-201ENST00000336180 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
LIMK1-201ENST00000336180 PLIN1O60240 522 aa16.82■□□□□ 0.28
LIMK1-201ENST00000336180 SYNMO15061 1565 aa16.82■□□□□ 0.28
LIMK1-201ENST00000336180 ADGRB3O60242 1522 aa16.81■□□□□ 0.28
LIMK1-201ENST00000336180 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
LIMK1-201ENST00000336180 LMTK2Q8IWU2 1503 aa16.81■□□□□ 0.28
LIMK1-201ENST00000336180 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
LIMK1-201ENST00000336180 NEUROD2Q15784 382 aa16.8■□□□□ 0.28
LIMK1-201ENST00000336180 PRAM1Q96QH2 718 aa16.8■□□□□ 0.28
LIMK1-201ENST00000336180 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
LIMK1-201ENST00000336180 POGKQ9P215 609 aa16.8■□□□□ 0.28
LIMK1-201ENST00000336180 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
LIMK1-201ENST00000336180 PIK3C2GO75747 1445 aa16.8■□□□□ 0.28
LIMK1-201ENST00000336180 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
LIMK1-201ENST00000336180 MYOM2P54296 1465 aa16.79■□□□□ 0.28
LIMK1-201ENST00000336180 LAMC1P11047 1609 aa16.78■□□□□ 0.28
LIMK1-201ENST00000336180 FBLN1P23142 703 aa16.77■□□□□ 0.27
LIMK1-201ENST00000336180 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.27
LIMK1-201ENST00000336180 RRP7AQ9Y3A4 280 aaKnown RBP16.76■□□□□ 0.27
LIMK1-201ENST00000336180 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
LIMK1-201ENST00000336180 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
LIMK1-201ENST00000336180 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
LIMK1-201ENST00000336180 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
LIMK1-201ENST00000336180 APAF1O14727 1248 aa16.74■□□□□ 0.27
LIMK1-201ENST00000336180 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
LIMK1-201ENST00000336180 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
LIMK1-201ENST00000336180 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
LIMK1-201ENST00000336180 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
LIMK1-201ENST00000336180 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
LIMK1-201ENST00000336180 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
LIMK1-201ENST00000336180 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.27
LIMK1-201ENST00000336180 NRXN1Q9ULB1 1477 aa16.71■□□□□ 0.27
LIMK1-201ENST00000336180 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
LIMK1-201ENST00000336180 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
LIMK1-201ENST00000336180 NEXMIFQ5QGS0 1516 aa16.71■□□□□ 0.26
LIMK1-201ENST00000336180 PPLO60437 1756 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 TXNDC2Q86VQ3 553 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 GLI2P10070 1586 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 IFT172Q9UG01 1749 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIMK1-201ENST00000336180 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
LIMK1-201ENST00000336180 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms