RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 DZIP1LQ8IYY4 767 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 ZNF608Q9ULD9 1512 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 HDGFL2Q7Z4V5 671 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-201ENST00000332246 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
CSGALNACT1-201ENST00000332246 FBLN1P23142 703 aa12.33□□□□□ -0.44
CSGALNACT1-201ENST00000332246 OS9Q13438 667 aaPredicted RBP12.33□□□□□ -0.44
CSGALNACT1-201ENST00000332246 PTPN23Q9H3S7 1636 aa12.32□□□□□ -0.44
CSGALNACT1-201ENST00000332246 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
CSGALNACT1-201ENST00000332246 THUMPD2Q9BTF0 503 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-201ENST00000332246 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
CSGALNACT1-201ENST00000332246 TRIM6-TRIM34B2RNG4 842 aa12.31□□□□□ -0.44
CSGALNACT1-201ENST00000332246 IGHDP01880 384 aa12.31□□□□□ -0.44
CSGALNACT1-201ENST00000332246 RUNDC1Q96C34 613 aa12.31□□□□□ -0.44
CSGALNACT1-201ENST00000332246 C22orf23Q9BZE7 217 aa12.31□□□□□ -0.44
CSGALNACT1-201ENST00000332246 MPNDQ8N594 471 aa12.3□□□□□ -0.44
CSGALNACT1-201ENST00000332246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
CSGALNACT1-201ENST00000332246 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-201ENST00000332246 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 KCNJ4P48050 445 aa12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 CUL7Q14999 1698 aa12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 EIF3AQ14152 1382 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 MIA2Q96PC5 1412 aa12.29□□□□□ -0.44
CSGALNACT1-201ENST00000332246 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 SLFN5Q08AF3 891 aa12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 TROQ12816 1431 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 TERF2IPQ9NYB0 399 aa12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 RPRD2Q5VT52 1461 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-201ENST00000332246 KIAA0586Q9BVV6 1533 aa12.27□□□□□ -0.44
CSGALNACT1-201ENST00000332246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
CSGALNACT1-201ENST00000332246 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 WWC1Q8IX03 1113 aa12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 BCL11BQ9C0K0 894 aaPredicted RBP12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
CSGALNACT1-201ENST00000332246 NOB1Q9ULX3 412 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-201ENST00000332246 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-201ENST00000332246 SEC24BO95487 1268 aa12.25□□□□□ -0.45
CSGALNACT1-201ENST00000332246 ERBINQ96RT1 1412 aa12.25□□□□□ -0.45
CSGALNACT1-201ENST00000332246 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-201ENST00000332246 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-201ENST00000332246 NUTM2GQ5VZR2 741 aa12.24□□□□□ -0.45
CSGALNACT1-201ENST00000332246 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
CSGALNACT1-201ENST00000332246 CHMP3Q9Y3E7 222 aa12.23□□□□□ -0.45
CSGALNACT1-201ENST00000332246 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
CSGALNACT1-201ENST00000332246 TRAK2O60296 914 aa12.23□□□□□ -0.45
CSGALNACT1-201ENST00000332246 PRKAR2BP31323 418 aa12.23□□□□□ -0.45
CSGALNACT1-201ENST00000332246 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
CSGALNACT1-201ENST00000332246 DDX19BQ9UMR2 479 aa12.22□□□□□ -0.45
CSGALNACT1-201ENST00000332246 HECW1Q76N89 1606 aa12.22□□□□□ -0.45
CSGALNACT1-201ENST00000332246 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
CSGALNACT1-201ENST00000332246 RNF214Q8ND24 703 aa12.22□□□□□ -0.45
CSGALNACT1-201ENST00000332246 CHMP5Q9NZZ3 219 aa12.22□□□□□ -0.45
CSGALNACT1-201ENST00000332246 FGD1P98174 961 aa12.21□□□□□ -0.45
CSGALNACT1-201ENST00000332246 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.45
CSGALNACT1-201ENST00000332246 DHX29Q7Z478 1369 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-201ENST00000332246 DCTN1Q14203 1278 aa12.21□□□□□ -0.46
CSGALNACT1-201ENST00000332246 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.46
CSGALNACT1-201ENST00000332246 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 RAPGEF3O95398 923 aa12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
CSGALNACT1-201ENST00000332246 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT1-201ENST00000332246 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
CSGALNACT1-201ENST00000332246 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
CSGALNACT1-201ENST00000332246 CABP1Q9NZU7 370 aa12.19□□□□□ -0.46
CSGALNACT1-201ENST00000332246 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-201ENST00000332246 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 RARSP54136 660 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 RLBP1P12271 317 aa12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 SSH1Q8WYL5 1049 aa12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
CSGALNACT1-201ENST00000332246 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 AMPHP49418 695 aa12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 HSP90AA2PQ14568 343 aaPredicted RBP12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 TESK2Q96S53 571 aa12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 STK31Q9BXU1 1019 aa12.17□□□□□ -0.46
CSGALNACT1-201ENST00000332246 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms