RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
CTHRC1-201ENST00000330295 NUTM2DQ5VT03 806 aaPredicted RBP24.03■■□□□ 1.44
CTHRC1-201ENST00000330295 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
CTHRC1-201ENST00000330295 RBM6P78332 1123 aaKnown RBP24.01■■□□□ 1.43
CTHRC1-201ENST00000330295 DIP2AQ14689 1571 aa23.99■■□□□ 1.43
CTHRC1-201ENST00000330295 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
CTHRC1-201ENST00000330295 QTRT2Q9H974 415 aaKnown RBP23.97■■□□□ 1.43
CTHRC1-201ENST00000330295 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
CTHRC1-201ENST00000330295 CHD2O14647 1828 aaKnown RBP23.96■■□□□ 1.43
CTHRC1-201ENST00000330295 NCOA3Q9Y6Q9 1424 aa23.95■■□□□ 1.42
CTHRC1-201ENST00000330295 IDI1Q13907 227 aa23.93■■□□□ 1.42
CTHRC1-201ENST00000330295 BCANQ96GW7 911 aa23.93■■□□□ 1.42
CTHRC1-201ENST00000330295 CADPS2Q86UW7 1296 aa23.92■■□□□ 1.42
CTHRC1-201ENST00000330295 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.91■■□□□ 1.42
CTHRC1-201ENST00000330295 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
CTHRC1-201ENST00000330295 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
CTHRC1-201ENST00000330295 NGLY1Q96IV0 654 aa23.88■■□□□ 1.41
CTHRC1-201ENST00000330295 ATF3P18847 181 aa23.87■■□□□ 1.41
CTHRC1-201ENST00000330295 BRINP3Q76B58 766 aa23.87■■□□□ 1.41
CTHRC1-201ENST00000330295 ADGRB3O60242 1522 aa23.87■■□□□ 1.41
CTHRC1-201ENST00000330295 DUOX2Q9NRD8 1548 aa23.87■■□□□ 1.41
CTHRC1-201ENST00000330295 C19orf44Q9H6X5 657 aa23.86■■□□□ 1.41
CTHRC1-201ENST00000330295 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
CTHRC1-201ENST00000330295 PLEKHG1Q9ULL1 1385 aa23.82■■□□□ 1.4
CTHRC1-201ENST00000330295 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
CTHRC1-201ENST00000330295 CCDC125Q86Z20 511 aa23.79■■□□□ 1.4
CTHRC1-201ENST00000330295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.79■■□□□ 1.4
CTHRC1-201ENST00000330295 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
CTHRC1-201ENST00000330295 LRRC59Q96AG4 307 aaKnown RBP23.78■■□□□ 1.4
CTHRC1-201ENST00000330295 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
CTHRC1-201ENST00000330295 EP400Q96L91 3159 aa23.77■■□□□ 1.4
CTHRC1-201ENST00000330295 TBX22Q9Y458 520 aa23.77■■□□□ 1.4
CTHRC1-201ENST00000330295 ERBINQ96RT1 1412 aa23.76■■□□□ 1.39
CTHRC1-201ENST00000330295 KANK1Q14678 1352 aa23.76■■□□□ 1.39
CTHRC1-201ENST00000330295 PNPLA6Q8IY17 1366 aa23.76■■□□□ 1.39
CTHRC1-201ENST00000330295 NOS1P29475 1434 aa23.76■■□□□ 1.39
CTHRC1-201ENST00000330295 LRP5O75197 1615 aa23.75■■□□□ 1.39
CTHRC1-201ENST00000330295 PPP1R15AO75807 674 aaPredicted RBP23.74■■□□□ 1.39
CTHRC1-201ENST00000330295 KIF15Q9NS87 1388 aa23.74■■□□□ 1.39
CTHRC1-201ENST00000330295 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
CTHRC1-201ENST00000330295 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
CTHRC1-201ENST00000330295 DCCP43146 1447 aa23.71■■□□□ 1.39
CTHRC1-201ENST00000330295 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
CTHRC1-201ENST00000330295 ADAMTS2O95450 1211 aa23.71■■□□□ 1.39
CTHRC1-201ENST00000330295 TRPC5Q9UL62 973 aaPredicted RBP23.71■■□□□ 1.39
CTHRC1-201ENST00000330295 USP21Q9UK80 565 aa23.7■■□□□ 1.38
CTHRC1-201ENST00000330295 MYO5BQ9ULV0 1848 aa23.7■■□□□ 1.38
CTHRC1-201ENST00000330295 HDGFP51858 240 aaKnown RBP23.69■■□□□ 1.38
CTHRC1-201ENST00000330295 PIK3R4Q99570 1358 aa23.68■■□□□ 1.38
CTHRC1-201ENST00000330295 ADAMTS13Q76LX8 1427 aa23.67■■□□□ 1.38
CTHRC1-201ENST00000330295 MST1RQ04912 1400 aa23.67■■□□□ 1.38
CTHRC1-201ENST00000330295 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
CTHRC1-201ENST00000330295 ATRNO75882 1429 aa23.65■■□□□ 1.38
CTHRC1-201ENST00000330295 DDX17Q92841 729 aaKnown RBP23.64■■□□□ 1.37
CTHRC1-201ENST00000330295 MYOM3Q5VTT5 1437 aa23.64■■□□□ 1.37
CTHRC1-201ENST00000330295 GCC2Q8IWJ2 1684 aa23.64■■□□□ 1.37
CTHRC1-201ENST00000330295 FNBP4Q8N3X1 1017 aaPredicted RBP23.62■■□□□ 1.37
CTHRC1-201ENST00000330295 AMOTL2Q9Y2J4 779 aa23.61■■□□□ 1.37
CTHRC1-201ENST00000330295 TMEM131LA2VDJ0 1609 aa23.61■■□□□ 1.37
CTHRC1-201ENST00000330295 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.6■■□□□ 1.37
CTHRC1-201ENST00000330295 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
CTHRC1-201ENST00000330295 TRPM2O94759 1503 aa23.59■■□□□ 1.37
CTHRC1-201ENST00000330295 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
CTHRC1-201ENST00000330295 CROCC2H7BZ55 1655 aa23.58■■□□□ 1.37
CTHRC1-201ENST00000330295 PTCH1Q13635 1447 aa23.58■■□□□ 1.36
CTHRC1-201ENST00000330295 DEFB132Q7Z7B7 95 aa23.55■■□□□ 1.36
CTHRC1-201ENST00000330295 RPRD2Q5VT52 1461 aaKnown RBP23.55■■□□□ 1.36
CTHRC1-201ENST00000330295 ABCC5O15440 1437 aa23.53■■□□□ 1.36
CTHRC1-201ENST00000330295 XRN1Q8IZH2 1706 aaKnown RBP23.52■■□□□ 1.36
CTHRC1-201ENST00000330295 LAMC1P11047 1609 aa23.5■■□□□ 1.35
CTHRC1-201ENST00000330295 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
CTHRC1-201ENST00000330295 GJD4Q96KN9 370 aaPredicted RBP23.48■■□□□ 1.35
CTHRC1-201ENST00000330295 CHGAP10645 457 aaKnown RBP23.47■■□□□ 1.35
CTHRC1-201ENST00000330295 HRCP23327 699 aa23.47■■□□□ 1.35
CTHRC1-201ENST00000330295 SF3B2Q13435 895 aaKnown RBP23.47■■□□□ 1.35
CTHRC1-201ENST00000330295 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
CTHRC1-201ENST00000330295 UNC13BO14795 1591 aa23.46■■□□□ 1.35
CTHRC1-201ENST00000330295 SOS2Q07890 1332 aaPredicted RBP23.46■■□□□ 1.35
CTHRC1-201ENST00000330295 COL22A1Q8NFW1 1626 aaPredicted RBP23.45■■□□□ 1.34
CTHRC1-201ENST00000330295 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.34
CTHRC1-201ENST00000330295 DAPK1P53355 1430 aa23.43■■□□□ 1.34
CTHRC1-201ENST00000330295 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
CTHRC1-201ENST00000330295 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
CTHRC1-201ENST00000330295 ANKRD30AQ9BXX3 1397 aa23.41■■□□□ 1.34
CTHRC1-201ENST00000330295 YY1P25490 414 aa23.41■■□□□ 1.34
CTHRC1-201ENST00000330295 SPHKAPQ2M3C7 1700 aa23.41■■□□□ 1.34
CTHRC1-201ENST00000330295 MARF1Q9Y4F3 1742 aaKnown RBP23.41■■□□□ 1.34
CTHRC1-201ENST00000330295 MYOM2P54296 1465 aa23.41■■□□□ 1.34
CTHRC1-201ENST00000330295 BRWD3Q6RI45 1802 aa23.4■■□□□ 1.34
CTHRC1-201ENST00000330295 NRXN3Q9Y4C0 1643 aa23.39■■□□□ 1.33
CTHRC1-201ENST00000330295 GLI3P10071 1580 aa23.39■■□□□ 1.33
CTHRC1-201ENST00000330295 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.39■■□□□ 1.33
CTHRC1-201ENST00000330295 RALGAPBQ86X10 1494 aa23.37■■□□□ 1.33
CTHRC1-201ENST00000330295 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
CTHRC1-201ENST00000330295 CHIC2Q9UKJ5 165 aa23.36■■□□□ 1.33
CTHRC1-201ENST00000330295 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
CTHRC1-201ENST00000330295 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
CTHRC1-201ENST00000330295 METP08581 1390 aa23.33■■□□□ 1.33
CTHRC1-201ENST00000330295 UNC5CLQ8IV45 518 aa23.31■■□□□ 1.32
CTHRC1-201ENST00000330295 BAG6P46379 1132 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms