RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 IQGAP3Q86VI3 1631 aa9.7□□□□□ -0.86
TRIM49-201ENST00000329758 RGS3P49796 1198 aa9.69□□□□□ -0.86
TRIM49-201ENST00000329758 DUOX2Q9NRD8 1548 aa9.69□□□□□ -0.86
TRIM49-201ENST00000329758 BCORL1Q5H9F3 1711 aa9.69□□□□□ -0.86
TRIM49-201ENST00000329758 NBPF1Q3BBV0 1214 aa9.68□□□□□ -0.86
TRIM49-201ENST00000329758 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
TRIM49-201ENST00000329758 ADGRL1O94910 1474 aa9.68□□□□□ -0.86
TRIM49-201ENST00000329758 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
TRIM49-201ENST00000329758 ATP7AQ04656 1500 aa9.67□□□□□ -0.86
TRIM49-201ENST00000329758 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
TRIM49-201ENST00000329758 PLA2R1Q13018 1463 aa9.67□□□□□ -0.86
TRIM49-201ENST00000329758 KIDINS220Q9ULH0 1771 aa9.66□□□□□ -0.86
TRIM49-201ENST00000329758 ERBINQ96RT1 1412 aa9.66□□□□□ -0.86
TRIM49-201ENST00000329758 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
TRIM49-201ENST00000329758 POGKQ9P215 609 aa9.66□□□□□ -0.86
TRIM49-201ENST00000329758 DEPDC5O75140 1603 aa9.66□□□□□ -0.86
TRIM49-201ENST00000329758 FSD2A1L4K1 749 aa9.65□□□□□ -0.86
TRIM49-201ENST00000329758 TERF1P54274 439 aa9.65□□□□□ -0.86
TRIM49-201ENST00000329758 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
TRIM49-201ENST00000329758 NAP1L2Q9ULW6 460 aaPredicted RBP9.65□□□□□ -0.86
TRIM49-201ENST00000329758 SCAPERQ9BY12 1400 aa9.65□□□□□ -0.87
TRIM49-201ENST00000329758 GOLGA6L3A6NEY3 463 aa9.64□□□□□ -0.87
TRIM49-201ENST00000329758 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
TRIM49-201ENST00000329758 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
TRIM49-201ENST00000329758 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
TRIM49-201ENST00000329758 CFAP74Q9C0B2 1584 aa9.64□□□□□ -0.87
TRIM49-201ENST00000329758 CCDC144AA2RUR9 1427 aa9.64□□□□□ -0.87
TRIM49-201ENST00000329758 SPAG9O60271 1321 aaKnown RBP9.64□□□□□ -0.87
TRIM49-201ENST00000329758 E9PCH4 1651 aa9.64□□□□□ -0.87
TRIM49-201ENST00000329758 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
TRIM49-201ENST00000329758 ROCK2O75116 1388 aaKnown RBP9.63□□□□□ -0.87
TRIM49-201ENST00000329758 ESPNB1AK53 854 aa9.63□□□□□ -0.87
TRIM49-201ENST00000329758 NPM1P06748 294 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIM49-201ENST00000329758 MTERF4Q7Z6M4 381 aaKnown RBP9.63□□□□□ -0.87
TRIM49-201ENST00000329758 KDM5CP41229 1560 aa9.63□□□□□ -0.87
TRIM49-201ENST00000329758 MROH1Q8NDA8 1641 aa9.63□□□□□ -0.87
TRIM49-201ENST00000329758 MAP3K4Q9Y6R4 1608 aa9.63□□□□□ -0.87
TRIM49-201ENST00000329758 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIM49-201ENST00000329758 ISY1Q9ULR0 285 aaKnown RBP9.63□□□□□ -0.87
TRIM49-201ENST00000329758 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
TRIM49-201ENST00000329758 CD109Q6YHK3 1445 aa9.62□□□□□ -0.87
TRIM49-201ENST00000329758 DHX29Q7Z478 1369 aaKnown RBP9.62□□□□□ -0.87
TRIM49-201ENST00000329758 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 CYB5RLQ6IPT4 315 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 EXOC6Q8TAG9 804 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
TRIM49-201ENST00000329758 UHRF1BP1Q6BDS2 1440 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 EIF2AK4Q9P2K8 1649 aaKnown RBP9.61□□□□□ -0.87
TRIM49-201ENST00000329758 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 A2MP01023 1474 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 SPHKAPQ2M3C7 1700 aa9.61□□□□□ -0.87
TRIM49-201ENST00000329758 ABCA6Q8N139 1617 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 ZNF518AQ6AHZ1 1483 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 KIF3BO15066 747 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 MRE11P49959 708 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 FAM161AQ3B820 660 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 HECW2Q9P2P5 1572 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 TSPOAP1O95153 1857 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 RICTORQ6R327 1708 aa9.6□□□□□ -0.87
TRIM49-201ENST00000329758 POGZQ7Z3K3 1410 aa9.59□□□□□ -0.87
TRIM49-201ENST00000329758 CEP152O94986 1710 aa9.59□□□□□ -0.87
TRIM49-201ENST00000329758 PRDM15P57071 1507 aaPredicted RBP9.59□□□□□ -0.87
TRIM49-201ENST00000329758 FRMPD1Q5SYB0 1578 aa9.59□□□□□ -0.87
TRIM49-201ENST00000329758 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
TRIM49-201ENST00000329758 TET3O43151 1660 aa9.59□□□□□ -0.87
TRIM49-201ENST00000329758 PRAG1Q86YV5 1406 aa9.59□□□□□ -0.87
TRIM49-201ENST00000329758 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
TRIM49-201ENST00000329758 VWDEQ8N2E2 1590 aa9.58□□□□□ -0.88
TRIM49-201ENST00000329758 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
TRIM49-201ENST00000329758 DMTNQ08495 405 aa9.57□□□□□ -0.88
TRIM49-201ENST00000329758 PPRC1Q5VV67 1664 aaKnown RBP9.57□□□□□ -0.88
TRIM49-201ENST00000329758 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.57□□□□□ -0.88
TRIM49-201ENST00000329758 TRPM1Q7Z4N2 1603 aa9.57□□□□□ -0.88
TRIM49-201ENST00000329758 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 RNF17Q9BXT8 1623 aaKnown RBP9.56□□□□□ -0.88
TRIM49-201ENST00000329758 ATP10AO60312 1499 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 ERBB4Q15303 1308 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 C8orf34Q49A92 452 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 MYH16Q9H6N6 1097 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 CFAP65Q6ZU64 1925 aaKnown RBP9.56□□□□□ -0.88
TRIM49-201ENST00000329758 DISP3Q9P2K9 1392 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 BECN1Q14457 450 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 PANK2Q9BZ23 570 aa9.56□□□□□ -0.88
TRIM49-201ENST00000329758 GLI2P10070 1586 aa9.55□□□□□ -0.88
TRIM49-201ENST00000329758 TRPM2O94759 1503 aa9.55□□□□□ -0.88
TRIM49-201ENST00000329758 NEO1Q92859 1461 aa9.55□□□□□ -0.88
TRIM49-201ENST00000329758 TRIM44Q96DX7 344 aaPredicted RBP9.55□□□□□ -0.88
TRIM49-201ENST00000329758 CHMP4BQ9H444 224 aaKnown RBP9.55□□□□□ -0.88
TRIM49-201ENST00000329758 UGGT1Q9NYU2 1555 aa9.55□□□□□ -0.88
TRIM49-201ENST00000329758 KIF13AQ9H1H9 1805 aa9.55□□□□□ -0.88
TRIM49-201ENST00000329758 RCAN3Q9UKA8 241 aa9.54□□□□□ -0.88
TRIM49-201ENST00000329758 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
TRIM49-201ENST00000329758 MLH3Q9UHC1 1453 aa9.54□□□□□ -0.88
TRIM49-201ENST00000329758 LRPPRCP42704 1394 aaKnown RBP9.54□□□□□ -0.88
TRIM49-201ENST00000329758 OFD1O75665 1012 aa9.54□□□□□ -0.88
TRIM49-201ENST00000329758 KIF20AO95235 890 aa9.54□□□□□ -0.88
TRIM49-201ENST00000329758 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
TRIM49-201ENST00000329758 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms