RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.217e-7■□□□□ 9.1
SEC24A-201ENST00000322887 EFCAB6Q5THR3 1501 aa16.36■□□□□ 0.21
SEC24A-201ENST00000322887 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
SEC24A-201ENST00000322887 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
SEC24A-201ENST00000322887 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
SEC24A-201ENST00000322887 PRKCSHP14314 528 aaPredicted RBP16.34■□□□□ 0.21
SEC24A-201ENST00000322887 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
SEC24A-201ENST00000322887 PLIN1O60240 522 aa16.33■□□□□ 0.21
SEC24A-201ENST00000322887 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.21
SEC24A-201ENST00000322887 TMC1Q8TDI8 760 aa16.33■□□□□ 0.21
SEC24A-201ENST00000322887 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.21
SEC24A-201ENST00000322887 CEP152O94986 1710 aa16.33■□□□□ 0.2
SEC24A-201ENST00000322887 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
SEC24A-201ENST00000322887 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
SEC24A-201ENST00000322887 USP47Q96K76 1375 aa16.31■□□□□ 0.2
SEC24A-201ENST00000322887 NPATQ14207 1427 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 PKD2Q13563 968 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 ESF1Q9H501 851 aaKnown RBP16.3■□□□□ 0.2
SEC24A-201ENST00000322887 E9PCH4 1651 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
SEC24A-201ENST00000322887 PTPRTO14522 1441 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 FER1L4A9Z1Z3 1794 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 MLECQ14165 292 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 CDCA7LQ96GN5 454 aa16.3■□□□□ 0.2
SEC24A-201ENST00000322887 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
SEC24A-201ENST00000322887 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
SEC24A-201ENST00000322887 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
SEC24A-201ENST00000322887 NEFMP07197 916 aa16.27■□□□□ 0.19
SEC24A-201ENST00000322887 NOS1P29475 1434 aa16.27■□□□□ 0.19
SEC24A-201ENST00000322887 MADDQ8WXG6 1647 aa16.27■□□□□ 0.19
SEC24A-201ENST00000322887 TRPM2O94759 1503 aa16.25■□□□□ 0.19
SEC24A-201ENST00000322887 SPATA31D1Q6ZQQ2 1576 aa16.25■□□□□ 0.19
SEC24A-201ENST00000322887 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
SEC24A-201ENST00000322887 ST20-MTHFSA0A0A6YYL1 179 aa16.24■□□□□ 0.19
SEC24A-201ENST00000322887 PDE4AP27815 886 aa16.24■□□□□ 0.19
SEC24A-201ENST00000322887 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
SEC24A-201ENST00000322887 ERVK-7P63135 1459 aa16.23■□□□□ 0.19
SEC24A-201ENST00000322887 SPHKAPQ2M3C7 1700 aa16.23■□□□□ 0.19
SEC24A-201ENST00000322887 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
SEC24A-201ENST00000322887 PREX1Q8TCU6 1659 aa16.22■□□□□ 0.19
SEC24A-201ENST00000322887 C3P01024 1663 aa16.22■□□□□ 0.19
SEC24A-201ENST00000322887 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.19
SEC24A-201ENST00000322887 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
SEC24A-201ENST00000322887 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
SEC24A-201ENST00000322887 PTPRMP28827 1452 aa16.19■□□□□ 0.18
SEC24A-201ENST00000322887 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
SEC24A-201ENST00000322887 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
SEC24A-201ENST00000322887 SYNMO15061 1565 aa16.18■□□□□ 0.18
SEC24A-201ENST00000322887 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
SEC24A-201ENST00000322887 C20orf194Q5TEA3 1177 aa16.18■□□□□ 0.18
SEC24A-201ENST00000322887 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
SEC24A-201ENST00000322887 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
SEC24A-201ENST00000322887 TNRQ92752 1358 aa16.16■□□□□ 0.18
SEC24A-201ENST00000322887 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
SEC24A-201ENST00000322887 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
SEC24A-201ENST00000322887 BACH2Q9BYV9 841 aa16.16■□□□□ 0.18
SEC24A-201ENST00000322887 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
SEC24A-201ENST00000322887 FBXO31Q5XUX0 539 aaPredicted RBP16.15■□□□□ 0.18
SEC24A-201ENST00000322887 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
SEC24A-201ENST00000322887 CRBNQ96SW2 442 aa16.15■□□□□ 0.18
SEC24A-201ENST00000322887 CLTCL1P53675 1640 aa16.14■□□□□ 0.17
SEC24A-201ENST00000322887 KDM5AP29375 1690 aaKnown RBP16.13■□□□□ 0.17
SEC24A-201ENST00000322887 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
SEC24A-201ENST00000322887 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
SEC24A-201ENST00000322887 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
SEC24A-201ENST00000322887 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
SEC24A-201ENST00000322887 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
SEC24A-201ENST00000322887 ADGRB3O60242 1522 aa16.1■□□□□ 0.17
SEC24A-201ENST00000322887 IDI1Q13907 227 aa16.1■□□□□ 0.17
SEC24A-201ENST00000322887 UGGT1Q9NYU2 1555 aa16.09■□□□□ 0.17
SEC24A-201ENST00000322887 TCERG1O14776 1098 aaKnown RBP16.09■□□□□ 0.17
SEC24A-201ENST00000322887 SETD1BQ9UPS6 1966 aaKnown RBP16.08■□□□□ 0.16
SEC24A-201ENST00000322887 MYO3AQ8NEV4 1616 aa16.08■□□□□ 0.16
SEC24A-201ENST00000322887 STAC3Q96MF2 364 aa16.08■□□□□ 0.16
SEC24A-201ENST00000322887 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
SEC24A-201ENST00000322887 KIF1BO60333 1816 aa16.07■□□□□ 0.16
SEC24A-201ENST00000322887 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
SEC24A-201ENST00000322887 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
SEC24A-201ENST00000322887 ZNF142P52746 1687 aaPredicted RBP16.07■□□□□ 0.16
SEC24A-201ENST00000322887 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
SEC24A-201ENST00000322887 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
SEC24A-201ENST00000322887 UHRF1BP1Q6BDS2 1440 aa16.03■□□□□ 0.16
SEC24A-201ENST00000322887 UBR1Q8IWV7 1749 aa16.03■□□□□ 0.16
SEC24A-201ENST00000322887 NFKBIBQ15653 356 aa16.03■□□□□ 0.16
SEC24A-201ENST00000322887 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
SEC24A-201ENST00000322887 ROCK2O75116 1388 aaKnown RBP16.02■□□□□ 0.16
SEC24A-201ENST00000322887 RGS3P49796 1198 aa16.02■□□□□ 0.16
SEC24A-201ENST00000322887 FRAT1Q92837 279 aaPredicted RBP16.02■□□□□ 0.16
SEC24A-201ENST00000322887 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
SEC24A-201ENST00000322887 SLIT1O75093 1534 aa16■□□□□ 0.15
SEC24A-201ENST00000322887 MYOM2P54296 1465 aa16■□□□□ 0.15
SEC24A-201ENST00000322887 RALBP1Q15311 655 aa16■□□□□ 0.15
SEC24A-201ENST00000322887 NLRP13Q86W25 1043 aa16■□□□□ 0.15
SEC24A-201ENST00000322887 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
SEC24A-201ENST00000322887 ARHGAP23Q9P227 1491 aa16■□□□□ 0.15
SEC24A-201ENST00000322887 IFT172Q9UG01 1749 aa15.98■□□□□ 0.15
SEC24A-201ENST00000322887 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
SEC24A-201ENST00000322887 TMEM2Q9UHN6 1383 aa15.98■□□□□ 0.15
SEC24A-201ENST00000322887 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
SEC24A-201ENST00000322887 PANK3Q9H999 370 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms