RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
LTBP3-202ENST00000322147 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
LTBP3-202ENST00000322147 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
LTBP3-202ENST00000322147 NUTM2GQ5VZR2 741 aa23.15■■□□□ 1.3
LTBP3-202ENST00000322147 LNPKQ9C0E8 428 aa23.15■■□□□ 1.3
LTBP3-202ENST00000322147 ZKSCAN2Q63HK3 967 aa23.14■■□□□ 1.3
LTBP3-202ENST00000322147 TSR2Q969E8 191 aaKnown RBP23.14■■□□□ 1.3
LTBP3-202ENST00000322147 TRIM6-TRIM34B2RNG4 842 aa23.14■■□□□ 1.29
LTBP3-202ENST00000322147 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
LTBP3-202ENST00000322147 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
LTBP3-202ENST00000322147 C9orf84Q5VXU9 1444 aa23.12■■□□□ 1.29
LTBP3-202ENST00000322147 C20orf194Q5TEA3 1177 aa23.12■■□□□ 1.29
LTBP3-202ENST00000322147 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
LTBP3-202ENST00000322147 CHMP4BQ9H444 224 aaKnown RBP23.12■■□□□ 1.29
LTBP3-202ENST00000322147 KIAA1107Q9UPP5 1409 aa23.11■■□□□ 1.29
LTBP3-202ENST00000322147 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
LTBP3-202ENST00000322147 FRAT2O75474 233 aaPredicted RBP23.11■■□□□ 1.29
LTBP3-202ENST00000322147 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
LTBP3-202ENST00000322147 ARID3AQ99856 593 aa23.11■■□□□ 1.29
LTBP3-202ENST00000322147 CCDC9Q9Y3X0 531 aaKnown RBP23.11■■□□□ 1.29
LTBP3-202ENST00000322147 DAPK1P53355 1430 aa23.1■■□□□ 1.29
LTBP3-202ENST00000322147 UBE2Q2Q8WVN8 375 aa23.1■■□□□ 1.29
LTBP3-202ENST00000322147 RPRD2Q5VT52 1461 aaKnown RBP23.1■■□□□ 1.29
LTBP3-202ENST00000322147 SUPT6HQ7KZ85 1726 aaKnown RBP23.09■■□□□ 1.29
LTBP3-202ENST00000322147 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
LTBP3-202ENST00000322147 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
LTBP3-202ENST00000322147 FAM69CQ0P6D2 419 aa23.09■■□□□ 1.29
LTBP3-202ENST00000322147 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
LTBP3-202ENST00000322147 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.29
LTBP3-202ENST00000322147 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.29
LTBP3-202ENST00000322147 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.29
LTBP3-202ENST00000322147 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.29
LTBP3-202ENST00000322147 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.28
LTBP3-202ENST00000322147 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.28
LTBP3-202ENST00000322147 DZIP1LQ8IYY4 767 aaKnown RBP23.07■■□□□ 1.28
LTBP3-202ENST00000322147 RSPH6AQ9H0K4 717 aa23.06■■□□□ 1.28
LTBP3-202ENST00000322147 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
LTBP3-202ENST00000322147 COG3Q96JB2 828 aa23.06■■□□□ 1.28
LTBP3-202ENST00000322147 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
LTBP3-202ENST00000322147 ARHGAP5Q13017 1502 aa23.04■■□□□ 1.28
LTBP3-202ENST00000322147 EIF2S2P20042 333 aaKnown RBP23.03■■□□□ 1.28
LTBP3-202ENST00000322147 C1orf115Q9H7X2 142 aa23.03■■□□□ 1.28
LTBP3-202ENST00000322147 NGEFQ8N5V2 710 aa23.03■■□□□ 1.28
LTBP3-202ENST00000322147 SPATA31E1Q6ZUB1 1445 aa23.02■■□□□ 1.28
LTBP3-202ENST00000322147 GLIPR1L2Q4G1C9 344 aa23.02■■□□□ 1.28
LTBP3-202ENST00000322147 ARHGEF11O15085 1522 aa23.02■■□□□ 1.28
LTBP3-202ENST00000322147 CALD1Q05682 793 aaKnown RBP23.02■■□□□ 1.28
LTBP3-202ENST00000322147 EXOSC9Q06265 439 aaKnown RBP23.01■■□□□ 1.27
LTBP3-202ENST00000322147 AMER1Q5JTC6 1135 aaPredicted RBP23.01■■□□□ 1.27
LTBP3-202ENST00000322147 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
LTBP3-202ENST00000322147 PRAM1Q96QH2 718 aa23.01■■□□□ 1.27
LTBP3-202ENST00000322147 ABCC5O15440 1437 aa23■■□□□ 1.27
LTBP3-202ENST00000322147 CHMP3Q9Y3E7 222 aa23■■□□□ 1.27
LTBP3-202ENST00000322147 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
LTBP3-202ENST00000322147 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
LTBP3-202ENST00000322147 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
LTBP3-202ENST00000322147 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
LTBP3-202ENST00000322147 HECW1Q76N89 1606 aa22.97■■□□□ 1.27
LTBP3-202ENST00000322147 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
LTBP3-202ENST00000322147 KIAA1211Q6ZU35 1233 aa22.96■■□□□ 1.27
LTBP3-202ENST00000322147 KDM6BO15054 1643 aa22.96■■□□□ 1.27
LTBP3-202ENST00000322147 PRKAR2BP31323 418 aa22.95■■□□□ 1.26
LTBP3-202ENST00000322147 THUMPD2Q9BTF0 503 aaKnown RBP22.95■■□□□ 1.26
LTBP3-202ENST00000322147 CABP1Q9NZU7 370 aa22.95■■□□□ 1.26
LTBP3-202ENST00000322147 TEX14Q8IWB6 1497 aa22.95■■□□□ 1.26
LTBP3-202ENST00000322147 UGGT2Q9NYU1 1516 aa22.95■■□□□ 1.26
LTBP3-202ENST00000322147 FAM43AQ8N2R8 423 aa22.95■■□□□ 1.26
LTBP3-202ENST00000322147 GOLGA6L4A6NEF3 574 aa22.93■■□□□ 1.26
LTBP3-202ENST00000322147 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
LTBP3-202ENST00000322147 FBLN1P23142 703 aa22.92■■□□□ 1.26
LTBP3-202ENST00000322147 GBP4Q96PP9 640 aa22.92■■□□□ 1.26
LTBP3-202ENST00000322147 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
LTBP3-202ENST00000322147 TULP1O00294 542 aaPredicted RBP22.91■■□□□ 1.26
LTBP3-202ENST00000322147 MCCP23508 829 aa22.91■■□□□ 1.26
LTBP3-202ENST00000322147 GOLGA6L3A6NEY3 463 aa22.91■■□□□ 1.26
LTBP3-202ENST00000322147 ZRSR1Q15695 479 aaKnown RBP22.91■■□□□ 1.26
LTBP3-202ENST00000322147 LRPPRCP42704 1394 aaKnown RBP22.9■■□□□ 1.26
LTBP3-202ENST00000322147 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
LTBP3-202ENST00000322147 DDX19BQ9UMR2 479 aa22.9■■□□□ 1.26
LTBP3-202ENST00000322147 L1TD1Q5T7N2 865 aaKnown RBP22.9■■□□□ 1.26
LTBP3-202ENST00000322147 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.26
LTBP3-202ENST00000322147 PDZRN3Q9UPQ7 1066 aa22.89■■□□□ 1.26
LTBP3-202ENST00000322147 HMMRO75330 724 aa22.87■■□□□ 1.25
LTBP3-202ENST00000322147 FKBP5Q13451 457 aaPredicted RBP22.87■■□□□ 1.25
LTBP3-202ENST00000322147 NPHP1O15259 732 aa22.87■■□□□ 1.25
LTBP3-202ENST00000322147 SLC26A8Q96RN1 970 aa22.86■■□□□ 1.25
LTBP3-202ENST00000322147 TCOF1Q13428 1488 aaKnown RBP22.86■■□□□ 1.25
LTBP3-202ENST00000322147 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
LTBP3-202ENST00000322147 LMOD3Q0VAK6 560 aa22.86■■□□□ 1.25
LTBP3-202ENST00000322147 RRS1Q15050 365 aaKnown RBP22.86■■□□□ 1.25
LTBP3-202ENST00000322147 ROCK1Q13464 1354 aa22.84■■□□□ 1.25
LTBP3-202ENST00000322147 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
LTBP3-202ENST00000322147 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
LTBP3-202ENST00000322147 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
LTBP3-202ENST00000322147 C22orf23Q9BZE7 217 aa22.83■■□□□ 1.25
LTBP3-202ENST00000322147 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.25
LTBP3-202ENST00000322147 NOB1Q9ULX3 412 aaKnown RBP22.83■■□□□ 1.25
LTBP3-202ENST00000322147 MSNP26038 577 aaKnown RBP22.82■■□□□ 1.24
LTBP3-202ENST00000322147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.82■■□□□ 1.24
LTBP3-202ENST00000322147 C8orf34Q49A92 452 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms